Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_L05
(616 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 124 2e-27
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 119 5e-26
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 119 5e-26
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 118 1e-25
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 103 3e-21
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 102 8e-21
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 100 2e-20
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 99 7e-20
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 98 2e-19
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 95 1e-18
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 93 6e-18
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 91 3e-17
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 87 2e-16
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 87 2e-16
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 79 6e-14
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 77 3e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 2e-12
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 64 2e-09
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 54 2e-06
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 54 3e-06
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 54 4e-06
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 53 6e-06
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 52 8e-06
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 51 3e-05
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 50 3e-05
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 48 1e-04
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 48 2e-04
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 45 0.001
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 42 0.015
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 40 0.036
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 40 0.047
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 40 0.062
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 38 0.25
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 37 0.33
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 37 0.33
UniRef50_A7F9H5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_A6SHQ7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q9P6C0 Cluster: Putative uncharacterized protein B17C10... 35 1.8
UniRef50_Q15911 Cluster: Zinc finger homeobox protein 3; n=25; A... 35 1.8
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 34 2.3
UniRef50_Q6TYB9 Cluster: Dauer abnormal formation-2 precursor; n... 34 2.3
UniRef50_A6FXV5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_A0H7D7 Cluster: Cytochrome c, class I; n=4; Comamonadac... 34 3.1
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 34 3.1
UniRef50_UPI0000DB6FC8 Cluster: PREDICTED: similar to turtle CG1... 33 4.1
UniRef50_Q68DE3 Cluster: Basic helix-loop-helix domain-containin... 33 5.4
UniRef50_Q05TV6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_A6G2S2 Cluster: Peptidase S1 and S6, chymotrypsin/Hap; ... 32 9.4
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 32 9.4
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 124 bits (299), Expect = 2e-27
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 24 LPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 83
Query: 351 THRSGQG 371
THRSGQG
Sbjct: 84 THRSGQG 90
Score = 89.8 bits (213), Expect = 4e-17
Identities = 40/81 (49%), Positives = 47/81 (58%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
AFGNMCRGGRMFAPTK WRRWH ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 553 PLVVADKVQEINKXKQAVIFL 615
PLVV DKV+ K K+AV+ L
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLL 171
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 119 bits (287), Expect = 5e-26
Identities = 54/67 (80%), Positives = 59/67 (88%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 141 LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGTGRAVARIPRVRGGG 200
Query: 351 THRSGQG 371
THRSGQG
Sbjct: 201 THRSGQG 207
Score = 51.6 bits (118), Expect = 1e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWH 438
AFGNMCRGGRMFAPTK +RRWH
Sbjct: 208 AFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 119 bits (287), Expect = 5e-26
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 27 LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 86
Query: 351 THRSGQG 371
THRSGQG
Sbjct: 87 THRSGQG 93
Score = 89.8 bits (213), Expect = 4e-17
Identities = 40/81 (49%), Positives = 50/81 (61%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
AFGNMCRGGRMFAPTK +RRWH Q++GH+I+ + E
Sbjct: 94 AFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEF 153
Query: 553 PLVVADKVQEINKXKQAVIFL 615
PLVV+D+VQ++ K KQAVIFL
Sbjct: 154 PLVVSDEVQKVQKTKQAVIFL 174
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 118 bits (284), Expect = 1e-25
Identities = 52/67 (77%), Positives = 58/67 (86%)
Frame = +3
Query: 168 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 347
PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVARIPRV GG
Sbjct: 22 PLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVARIPRVSGG 81
Query: 348 GTHRSGQ 368
GTHR+GQ
Sbjct: 82 GTHRAGQ 88
Score = 66.5 bits (155), Expect = 5e-10
Identities = 30/72 (41%), Positives = 37/72 (51%)
Frame = +1
Query: 367 RXAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIP 546
+ AFGNMCR GRMFAPTK WR+WH ARGH I ++
Sbjct: 88 QAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPALLFARGHQISEVA 147
Query: 547 ELPLVVADKVQE 582
E+PLV+ +V E
Sbjct: 148 EVPLVINSEVFE 159
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 103 bits (248), Expect = 3e-21
Identities = 46/66 (69%), Positives = 55/66 (83%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
+P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGG
Sbjct: 23 MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGG 82
Query: 351 THRSGQ 368
THR+GQ
Sbjct: 83 THRAGQ 88
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/83 (37%), Positives = 42/83 (50%)
Frame = +1
Query: 367 RXAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIP 546
+ A+ N CR G M+APT+ WRRWH +RGH IE +
Sbjct: 88 QAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEALR 147
Query: 547 ELPLVVADKVQEINKXKQAVIFL 615
E+P+VV D +++INK K AV L
Sbjct: 148 EVPMVVDDAIEQINKTKDAVKLL 170
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 102 bits (244), Expect = 8e-21
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = +3
Query: 168 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 347
PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G
Sbjct: 24 PLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGS 83
Query: 348 GTHRSGQ 368
GTHRSGQ
Sbjct: 84 GTHRSGQ 90
Score = 70.5 bits (165), Expect = 3e-11
Identities = 32/83 (38%), Positives = 40/83 (48%)
Frame = +1
Query: 367 RXAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIP 546
+ AFGN CR GRM P K WRRWH ARGH I ++P
Sbjct: 90 QAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQVP 149
Query: 547 ELPLVVADKVQEINKXKQAVIFL 615
++PLVV DK++ K A+ FL
Sbjct: 150 QIPLVVEDKIESYEKTTDALNFL 172
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 100 bits (240), Expect = 2e-20
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
+P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTSA SWGTGRA++R PRV+GGG
Sbjct: 23 MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKGGG 82
Query: 351 THRSGQ 368
THRSGQ
Sbjct: 83 THRSGQ 88
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/83 (34%), Positives = 40/83 (48%)
Frame = +1
Query: 367 RXAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIP 546
+ A+ N CR G MFAPT+ WR WH +RGH +E +P
Sbjct: 88 QAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVESVP 147
Query: 547 ELPLVVADKVQEINKXKQAVIFL 615
ELPLV+ D ++ + K + AV L
Sbjct: 148 ELPLVLDDTMETLTKTRDAVELL 170
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 99.1 bits (236), Expect = 7e-20
Identities = 48/68 (70%), Positives = 52/68 (76%)
Frame = +3
Query: 168 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 347
PLP VF +P+R DLV V +MSKN RQ Y VS +AGHQ SAESWGTGRAVARIPRV
Sbjct: 24 PLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVARIPRVSAS 83
Query: 348 GTHRSGQG 371
GT RSGQG
Sbjct: 84 GTSRSGQG 91
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/80 (42%), Positives = 43/80 (53%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
AFGNMCRGG MF+P K +RR+H ARGH I +PEL
Sbjct: 92 AFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMARGHRINNVPEL 151
Query: 553 PLVVADKVQEINKXKQAVIF 612
PLV+++++Q INK AV F
Sbjct: 152 PLVISNEIQNINKTSTAVEF 171
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/66 (66%), Positives = 52/66 (78%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
+P VF+ PIR DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGG
Sbjct: 24 IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGG 83
Query: 351 THRSGQ 368
THR+GQ
Sbjct: 84 THRAGQ 89
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/83 (38%), Positives = 41/83 (49%)
Frame = +1
Query: 367 RXAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIP 546
+ AFGNMCRGG MF PTK WRRW ARGH I +
Sbjct: 89 QAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLARGHRISNLK 148
Query: 547 ELPLVVADKVQEINKXKQAVIFL 615
E+PLV ++ ++ + K K A+ FL
Sbjct: 149 EVPLVASNDIESMQKTKDALKFL 171
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 95.1 bits (226), Expect = 1e-18
Identities = 44/68 (64%), Positives = 51/68 (75%)
Frame = +3
Query: 168 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 347
PLP VF APIR D+V VH +M+KNSRQ Y V++ +G SA SWGTGRAVARIPR+ GG
Sbjct: 22 PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHSWGTGRAVARIPRISGG 81
Query: 348 GTHRSGQG 371
GT SG G
Sbjct: 82 GTSTSGAG 89
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/81 (45%), Positives = 44/81 (54%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
AFGNMCRGGRMFAPTK +RRWH +RGH I +PE+
Sbjct: 90 AFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSLVMSRGHQIGNVPEV 149
Query: 553 PLVVADKVQEINKXKQAVIFL 615
PLVV D +Q K K+A+ FL
Sbjct: 150 PLVVEDSIQGYEKTKEAMAFL 170
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 92.7 bits (220), Expect = 6e-18
Identities = 43/67 (64%), Positives = 49/67 (73%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
LP VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGG
Sbjct: 21 LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGG 80
Query: 351 THRSGQG 371
T R+GQG
Sbjct: 81 TRRAGQG 87
Score = 56.4 bits (130), Expect = 5e-07
Identities = 28/81 (34%), Positives = 35/81 (43%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
AF N CR GRM PTK RRW +ARGH I + L
Sbjct: 88 AFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHRISDVKML 147
Query: 553 PLVVADKVQEINKXKQAVIFL 615
P++V+D + + K K AV L
Sbjct: 148 PIIVSDDIAKARKTKDAVEIL 168
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 90.6 bits (215), Expect = 3e-17
Identities = 43/69 (62%), Positives = 50/69 (72%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 351 THRSGQGCL 377
THRSGQG +
Sbjct: 79 THRSGQGAI 87
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
A N CRGGR+F PT WR+WH +RG+ ++ IPE+
Sbjct: 86 AIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYRVKTIPEI 145
Query: 553 PLVVADKVQEINKXKQAVIFL 615
P V+ D +++I K + + L
Sbjct: 146 PFVIEDSIEKIPKTRDLIKIL 166
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 87.4 bits (207), Expect = 2e-16
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G
Sbjct: 24 LPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSG 83
Query: 351 THRSGQG 371
+ R+GQG
Sbjct: 84 SGRNGQG 90
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/82 (37%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
AFGNM R G MF+P K +R+W ARGH I +P++
Sbjct: 91 AFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHIAGVPQI 150
Query: 553 PLVVADK-VQEINKXKQAVIFL 615
PLVV K + I K KQAV L
Sbjct: 151 PLVVNSKSISVIKKTKQAVYLL 172
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 87.4 bits (207), Expect = 2e-16
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = +3
Query: 171 LPFVFK-APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 347
+P V + +PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G
Sbjct: 23 VPSVIRYSPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGS 82
Query: 348 GTHRSGQ 368
GT R+GQ
Sbjct: 83 GTSRNGQ 89
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/80 (41%), Positives = 42/80 (52%)
Frame = +1
Query: 367 RXAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIP 546
+ AF N RGG M++P K WRRWH ARGH I+ +P
Sbjct: 89 QAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGHKIDNVP 148
Query: 547 ELPLVVADKVQEINKXKQAV 606
ELPLVV+D V++I K K+AV
Sbjct: 149 ELPLVVSDDVEQIKKTKEAV 168
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 79.4 bits (187), Expect = 6e-14
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
LP VF PIR ++V +V+V+++KN++QP+ AG + SA SWGTGRA A +PRV G G
Sbjct: 21 LPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGRAKACVPRVNGSG 80
Query: 351 THRSGQG 371
++R+GQG
Sbjct: 81 SNRNGQG 87
Score = 58.8 bits (136), Expect = 9e-08
Identities = 28/81 (34%), Positives = 37/81 (45%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
A+ N CRGG F P RRW QARGH++ ++ E+
Sbjct: 88 AYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVVPLVQARGHVLGEVKEV 147
Query: 553 PLVVADKVQEINKXKQAVIFL 615
P+VV D VQEI + + AV L
Sbjct: 148 PIVVVDAVQEIKRTRDAVELL 168
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/63 (55%), Positives = 42/63 (66%)
Frame = +3
Query: 159 AAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV 338
A P P VF P+RPD++N VH + K R PY VS+ AG Q +A SWG GRAVAR+PR
Sbjct: 16 AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLPRK 75
Query: 339 RGG 347
GG
Sbjct: 76 HGG 78
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/81 (29%), Positives = 31/81 (38%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
A+ N RGG M PT RRW +ARGH I +P +
Sbjct: 81 AYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALVEARGHRIADVPSI 140
Query: 553 PLVVADKVQEINKXKQAVIFL 615
PLVV + K K A+ +
Sbjct: 141 PLVV--DTDNVTKTKDALAII 159
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3
Query: 204 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +3
Query: 237 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 368
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQ 65
Score = 69.3 bits (162), Expect = 7e-11
Identities = 33/86 (38%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 367 RXAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIP 546
+ AFGNMCR GRMFAPTK WR+WH ARGH + +P
Sbjct: 65 QAAFGNMCRSGRMFAPTKVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVP 124
Query: 547 ELPLVVADKV---QEINKXKQAVIFL 615
E+PLV++ I K AV L
Sbjct: 125 EVPLVISSTAFADAAIRKTSAAVALL 150
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 344
LP F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G
Sbjct: 18 LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKG 75
Score = 39.1 bits (87), Expect = 0.082
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 394 GGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADK 573
G + APT P + W + RGH+I+ +P LP+VV D+
Sbjct: 93 GQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDE 151
Query: 574 VQEINKXKQ 600
++ +NK ++
Sbjct: 152 LKSLNKARE 160
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = +3
Query: 273 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGCL 377
+G+Q SA+SWG GR +ARIPR++G GT ++GQG L
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGAL 93
Score = 35.9 bits (79), Expect = 0.77
Identities = 14/64 (21%), Positives = 25/64 (39%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
A NMCRGGR+F ++W+ +RGH ++ +
Sbjct: 92 ALANMCRGGRLFGNRNYSKKWNIKTNRKVKVSAFKTALLSTLFETLVVSRGHSLKDVKNF 151
Query: 553 PLVV 564
P+++
Sbjct: 152 PMII 155
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+ G
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKNSG 84
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 344
LP +F+ RPD++ +SM QP+ AG +T+AES+G+GR A +PRV+G
Sbjct: 19 LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG 76
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 52.8 bits (121), Expect = 6e-06
Identities = 21/32 (65%), Positives = 29/32 (90%)
Frame = +1
Query: 520 RGHIIEKIPELPLVVADKVQEINKXKQAVIFL 615
RG++++ + E+PLVV+DK+QEINK KQAVIFL
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFL 36
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 52.4 bits (120), Expect = 8e-06
Identities = 34/112 (30%), Positives = 41/112 (36%)
Frame = +1
Query: 280 TKPVPNHGVPDVLLPEFRXXXXXXPIGPVRXAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 459
TKP P+ G P FR P PV+ G + WRRWH
Sbjct: 71 TKPRPSPGAPVARSLVFRVCRAVVPTAPVK--------GRSVTCAAVTWRRWHRRVNIKE 122
Query: 460 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKXKQAVIFL 615
ARGH +E +PE+PLVV D I K +AV L
Sbjct: 123 KRYAVCSAIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELL 174
Score = 33.5 bits (73), Expect = 4.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 159 AAKPLPFVFKAPIRPDLVNDVHVSMSKN 242
A+ +P VF +PIR D+VN VH ++KN
Sbjct: 16 ASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 344
LP +F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 31 LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG 88
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +3
Query: 174 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 344
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKG 101
Score = 49.2 bits (112), Expect = 8e-05
Identities = 24/79 (30%), Positives = 34/79 (43%)
Frame = +1
Query: 367 RXAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIP 546
R F RGGR P K ++ H ARGH++EK+P
Sbjct: 106 RGCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVVEKVP 165
Query: 547 ELPLVVADKVQEINKXKQA 603
LP+VV ++IN+ K+A
Sbjct: 166 SLPVVVVGDAEKINRAKEA 184
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 344
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDG 75
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 347
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG 76
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVARIPRVRG 344
LP VF P R DL+ + + + QP AG SA+S TG ARI R++G
Sbjct: 18 LPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARIARMKG 77
Query: 345 GGTHRSGQ 368
GG R G+
Sbjct: 78 GGGRRRGE 85
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 41.5 bits (93), Expect = 0.015
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 347
LP VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 20 LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGG 78
Score = 32.3 bits (70), Expect = 9.4
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 520 RGHIIEKIPELPLVVADKVQEINKXKQAVIFL 615
RGH ++ +LP+VV D V+ INK K A+ L
Sbjct: 131 RGHRFKEGLKLPIVVEDGVEGINKTKDAIALL 162
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 40.3 bits (90), Expect = 0.036
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +1
Query: 517 ARGHIIEKIPELPLVVADKVQEINKXKQAVIFL 615
++GH I ++PELPLVV DKV+ K ++AV+ L
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLL 34
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 39.9 bits (89), Expect = 0.047
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 517 ARGHIIEKIPELPLVVADKVQEINKXKQAVIFL 615
ARGH IE +PELPLV+ D + + K A+ L
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDIL 34
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 39.5 bits (88), Expect = 0.062
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Frame = +3
Query: 162 AKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESWGTGRAV 320
A LP VF IR DL+ ++ N RQ Y + +AG + S E WG GR V
Sbjct: 47 AVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWWGKGRGV 106
Query: 321 ARIPRVRGGGT 353
+RI R G T
Sbjct: 107 SRIMRKAGQRT 117
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 37.5 bits (83), Expect = 0.25
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 375 GXPDRTYGYHHHGHAEFGQQHVR-YP 301
G PD +G+HHHGH G HV YP
Sbjct: 182 GAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 37.1 bits (82), Expect = 0.33
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 372 CLR*HVSWWTYVRPHEALAALAPSRQP 452
C+R HV WW +VR E L LAP QP
Sbjct: 142 CVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 37.1 bits (82), Expect = 0.33
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 519 SLNERWXASSSNGCCQGRSPLSEVDATVPAPPGL 418
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_A7F9H5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1513
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 522 SSLNERWXASSSNGCCQGRSPLSEVDATVPAPPGLRGGEHTSTTT 388
S+ ++ A +G +P E+ A +P PPGL G+H S+ T
Sbjct: 224 STKGKQLVAGLGDGTAVQMTPEGEIKAEIPKPPGLNDGDHVSSIT 268
>UniRef50_A6SHQ7 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1512
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 522 SSLNERWXASSSNGCCQGRSPLSEVDATVPAPPGLRGGEHTSTTT 388
S+ ++ A +G +P E+ A +P PPGL G+H S+ T
Sbjct: 224 STKGKQLVAGLGDGSAVQMTPEGEIKAEIPKPPGLNDGDHVSSIT 268
>UniRef50_Q9P6C0 Cluster: Putative uncharacterized protein
B17C10.290; n=3; Sordariales|Rep: Putative
uncharacterized protein B17C10.290 - Neurospora crassa
Length = 468
Score = 34.7 bits (76), Expect = 1.8
Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Frame = -2
Query: 555 GKLGNLFNNVSSSLNERWXASSSN-GCCQGRSPLSEVDATVPAPPGLRGGEHTSTTTHVT 379
G +GNLF N SS N+R SS G S T PA S++T+ T
Sbjct: 237 GGIGNLFGNKPSSANQRTPDQSSGFGYSNSGQSGSYSGQTPPATYQQATSGGGSSSTYHT 296
Query: 378 EGXPDRTYGYH--HHGHA--EFGQ--QHVRYPMIRHWFGDQPPCXXXXXXXXSWT*KREH 217
G +++ H H G + +G QH Y +H G QPP T ++
Sbjct: 297 AGPTSQSHQSHQSHSGSSTPSYGAAGQHAPYGQNQH--GQQPPYGSTSSYTSPPTGQQPQ 354
Query: 216 H*PGP 202
+ P P
Sbjct: 355 YAPPP 359
>UniRef50_Q15911 Cluster: Zinc finger homeobox protein 3; n=25;
Amniota|Rep: Zinc finger homeobox protein 3 - Homo
sapiens (Human)
Length = 3703
Score = 34.7 bits (76), Expect = 1.8
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 377 SVTCVVVDVCSPPRSPGGAGTVASTSDSGERPWQQ 481
S T + D CSP SPG +G+ + DSG+RP Q+
Sbjct: 2915 SETSSLADPCSP--SPGASGSAGKSGDSGDRPGQK 2947
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 34.3 bits (75), Expect = 2.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 517 ARGHIIEKIPELPLVVADKVQEINKXKQAVIFL 615
ARGH IE + ELPLV+ D + ++K + L
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDIL 56
>UniRef50_Q6TYB9 Cluster: Dauer abnormal formation-2 precursor; n=2;
Caenorhabditis briggsae|Rep: Dauer abnormal formation-2
precursor - Caenorhabditis briggsae
Length = 1807
Score = 34.3 bits (75), Expect = 2.3
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = -2
Query: 468 RSPLSEV-DATVPAPPGLRGG-EHTSTTTHVTEGXPDRT--YGYHHHGH 334
++ LS V D V P G G ++T T +++G P + GYHHHGH
Sbjct: 1735 KAKLSGVGDHPVVIPTGFNGDPDYTETEPPLSKGSPSKNGNTGYHHHGH 1783
>UniRef50_A6FXV5 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 342
Score = 33.9 bits (74), Expect = 3.1
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = +2
Query: 236 QELEAALLREQGGWSPNQCRIMGYRTCCCPNSA--CPWWWYP*VRSGXPSVTCVVVDVCS 409
+EL AALL G SP C R CC + P W R+G S + V+ D +
Sbjct: 261 EELTAALLAFANGSSPGDCLTASTRPCCASRAGTRSPTPWACRRRTGRGSSSVVIADWSA 320
Query: 410 PPRSPGGAGTVASTSDSG 463
P +G S G
Sbjct: 321 SPTGSRISGPCPPGSPHG 338
>UniRef50_A0H7D7 Cluster: Cytochrome c, class I; n=4;
Comamonadaceae|Rep: Cytochrome c, class I - Comamonas
testosteroni KF-1
Length = 991
Score = 33.9 bits (74), Expect = 3.1
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 261 VSKEAGHQTSAESWGTGRAVARIPRVRGG-GTHRSGQGCLR*HVSWW 398
VS G Q S ES TGR V R+ G GT R CL H+S W
Sbjct: 94 VSHSPGSQESYESIDTGRYVWRMAGASAGSGTARVAAWCLDGHISLW 140
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 33.9 bits (74), Expect = 3.1
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -3
Query: 416 VGANIRPPRHMLPKA 372
VGANI PPRHMLPKA
Sbjct: 107 VGANILPPRHMLPKA 121
>UniRef50_UPI0000DB6FC8 Cluster: PREDICTED: similar to turtle
CG15427-PD, isoform D; n=1; Apis mellifera|Rep:
PREDICTED: similar to turtle CG15427-PD, isoform D -
Apis mellifera
Length = 430
Score = 33.5 bits (73), Expect = 4.1
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -3
Query: 248 PRVLGHRNVNIIDQVRTYGRLEYEREGLGCXPAPSHSSLNTPTVKVGLPIDSFRYFSEAI 69
P GH +D G YE + + C P P+ +S TPT + LP+ +
Sbjct: 335 PAKAGHGQTTAVDAGSVDGH--YEFDPVSCTPTPTSAS--TPTREERLPVHQIHHQLHHQ 390
Query: 68 PPKYT 54
PP+Y+
Sbjct: 391 PPRYS 395
>UniRef50_Q68DE3 Cluster: Basic helix-loop-helix domain-containing
protein KIAA2018; n=16; Amniota|Rep: Basic
helix-loop-helix domain-containing protein KIAA2018 -
Homo sapiens (Human)
Length = 2242
Score = 33.1 bits (72), Expect = 5.4
Identities = 27/89 (30%), Positives = 39/89 (43%)
Frame = -2
Query: 534 NNVSSSLNERWXASSSNGCCQGRSPLSEVDATVPAPPGLRGGEHTSTTTHVTEGXPDRTY 355
N +S+LN + +SSS+G QGR+ V P + T +H T+G +
Sbjct: 1884 NTRNSTLNIPFSSSSSSGDIQGRNTSPNVSVQKSNPMRI-------TESHATKGHMNPPV 1936
Query: 354 GYHHHGHAEFGQQHVRYPMIRHWFGDQPP 268
+ HG A H P + H GDQ P
Sbjct: 1937 TTNMHGVARPALPH---PSVSHGNGDQGP 1962
>UniRef50_Q05TV6 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. RS9916|Rep: Putative uncharacterized
protein - Synechococcus sp. RS9916
Length = 143
Score = 32.7 bits (71), Expect = 7.1
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 269 GGWSPNQCRIMG--YRTCCCPNSACPWWWY 352
GGW P CR Y + C PWWW+
Sbjct: 54 GGWVPAYCRDQPDQYSSGSCYGGGVPWWWW 83
>UniRef50_A6G2S2 Cluster: Peptidase S1 and S6, chymotrypsin/Hap;
n=1; Plesiocystis pacifica SIR-1|Rep: Peptidase S1 and
S6, chymotrypsin/Hap - Plesiocystis pacifica SIR-1
Length = 366
Score = 32.3 bits (70), Expect = 9.4
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -3
Query: 410 ANIRPPRHMLPKAXLTGPMGXXXXXTRNSGNSTSGTP*FGTGLVTSLLAHAVGLPRVL-G 234
A++ PR + P + NSG G+ T++ GL +
Sbjct: 197 ADLGSPRDLDPNGIWSFIQTDASINIGNSGGPLVDVEGRVVGITTAVRQDGQGLAFAIPS 256
Query: 233 HRNVNIIDQVRTYGRLEYEREGLGCXPAPSHS 138
+ ID+VRT+GR+ + R G+G + +H+
Sbjct: 257 PMALRFIDEVRTHGRMRHTRLGIGAENSHAHA 288
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 32.3 bits (70), Expect = 9.4
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +3
Query: 177 FVFKAPIRPDLVNDVHVS----MSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 344
F++K P +PD + HV+ +N+ +P+ + E H +A G A + + G
Sbjct: 434 FLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAAFMAQHNG 493
Query: 345 GGTHRSGQG 371
G S G
Sbjct: 494 GANMESHAG 502
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,911,161
Number of Sequences: 1657284
Number of extensions: 13352071
Number of successful extensions: 42940
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 40369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42792
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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