Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_L05
(616 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 108 4e-24
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 107 7e-24
10_02_0199 + 6668902-6669293,6669825-6669882 31 0.96
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 31 0.96
03_05_0366 - 23505755-23506441 30 1.3
07_03_0600 + 19866757-19867218,19867920-19868429 29 2.9
04_04_0347 + 24564589-24565296 25 3.8
03_05_0452 + 24464134-24464442 29 3.9
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 28 5.1
07_01_0380 - 2834080-2834451,2835945-2836130 28 5.1
02_04_0457 + 23093020-23093343,23093798-23093806 28 5.1
05_05_0285 - 23855219-23855371,23855391-23856063,23856239-238563... 28 6.8
04_03_1018 + 21753634-21753640,21754282-21754315,21754413-217544... 28 6.8
03_06_0199 + 32310272-32311432 28 6.8
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 28 6.8
12_02_0488 + 19587337-19587648,19587739-19587798,19587876-195879... 27 8.9
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875... 27 8.9
03_06_0099 - 31645398-31645955 27 8.9
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 27 8.9
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 108 bits (259), Expect = 4e-24
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 180 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 359
VF+AP+RPD+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 31 VFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 90
Query: 360 SGQG 371
+GQG
Sbjct: 91 AGQG 94
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/81 (46%), Positives = 44/81 (54%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
AFGNMCRGGRMFAPTK WR+WH ARGH IE +PEL
Sbjct: 95 AFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIETVPEL 154
Query: 553 PLVVADKVQEINKXKQAVIFL 615
PLV++D + I K QA+ L
Sbjct: 155 PLVISDSAESIEKTSQAIKIL 175
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 107 bits (257), Expect = 7e-24
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
+P V +APIRPD+V H +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGG
Sbjct: 27 MPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGG 86
Query: 351 THRSGQG 371
THR+GQG
Sbjct: 87 THRAGQG 93
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/78 (47%), Positives = 43/78 (55%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
AFGNMCRGGRMFAPTK WRRWH ARGH IE +PE
Sbjct: 94 AFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHRIEGVPEF 153
Query: 553 PLVVADKVQEINKXKQAV 606
PLVV+D ++ I K Q++
Sbjct: 154 PLVVSDSIESIEKTAQSI 171
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 291 AESWGTGRAVARIPRVRGGGTHR 359
A+SW TGRA A + R R GG R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRR 58
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 30.7 bits (66), Expect = 0.96
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = -2
Query: 444 ATVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 268
AT A P + G H +T H T + Y +HHH H Q H + H PP
Sbjct: 352 ATQAAGPAIYGA-HPATQPHYTAAVAAQEYYHHHHHHL---QHHPAAAALVHHRAVAPP 406
>03_05_0366 - 23505755-23506441
Length = 228
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 177 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 353
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 354 H 356
+
Sbjct: 168 N 168
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/56 (23%), Positives = 22/56 (39%)
Frame = -2
Query: 435 PAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 268
P PP + GG H + G P +G++ + P+ H++ PP
Sbjct: 4 PPPPTMNGGHHAAPPPPQVSGAPPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPP 59
>04_04_0347 + 24564589-24565296
Length = 235
Score = 25.4 bits (53), Expect(2) = 3.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -2
Query: 405 HTSTTTHVTEGXPDRTYGYHHHGH 334
H V + P ++ +HHHGH
Sbjct: 78 HAPAPAPVRDDKPSPSHHHHHHGH 101
Score = 21.8 bits (44), Expect(2) = 3.8
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 357 YGYHHHGHA 331
+G+HHH HA
Sbjct: 99 HGHHHHRHA 107
>03_05_0452 + 24464134-24464442
Length = 102
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 233 VQELEAALLREQGGWSPNQCRIMGYRTCCCPNSA 334
V+++ ++LLR G Q ++G R C C NSA
Sbjct: 21 VEKVRSSLLRVLGLLRGGQASMLGKRACFCSNSA 54
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 474 QGRSPLSEVDATVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHG 337
Q RSP + + P P G GG H S+++ + G + +HHHG
Sbjct: 102 QRRSPSTAPPPSPPQPSG-GGGHHHSSSS--SGGGGGGYHNHHHHG 144
>07_01_0380 - 2834080-2834451,2835945-2836130
Length = 185
Score = 28.3 bits (60), Expect = 5.1
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = +3
Query: 279 HQ-TSAESWGTGRAVARIPRVRGGGTHRSGQGCLR*HVSWWTYVRPH---EALAALAPSR 446
HQ S+ G A AR V G + SG G V P +A AA AP+
Sbjct: 92 HQGESSSGGGVSTAAARHCDVAGSSSSHSGSGSGSATPPRPALVSPRAGLQAAAAAAPTM 151
Query: 447 QPPTAESGLGSSR 485
P A SGL R
Sbjct: 152 NQPPAASGLSMKR 164
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 276 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 371
G + S W G A A VRGGG RSG G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGG 106
>05_05_0285 -
23855219-23855371,23855391-23856063,23856239-23856301,
23856478-23856604,23856751-23856897,23856968-23856974,
23857203-23857379
Length = 448
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 423 LAALAPSRQPPTAESGLGSSRCCYWRXSARS 515
+A AP AESG+G+ C +WR S S
Sbjct: 306 IAKDAPPAVEVKAESGVGTLGCAFWRTSLGS 336
>04_03_1018 +
21753634-21753640,21754282-21754315,21754413-21754432,
21754485-21755782
Length = 452
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +3
Query: 279 HQTSAESWGTGRAVARI---PRVRGGGTHRSGQGCLR*HVSW 395
H A S RAVA I RGG H G L H+SW
Sbjct: 296 HDAHAASDAAVRAVAAICASEPARGGAIHHGAVGALLGHLSW 337
>03_06_0199 + 32310272-32311432
Length = 386
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 435 PAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAE 328
P P LRGG + H+ +G DR HG E
Sbjct: 206 PRVPLLRGGIRGGSAAHLQDGQKDRADLQDEHGRGE 241
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -2
Query: 462 PLSEVDATVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHH-HGHAEFGQQHVRYPMIRH 289
P +E D APP +T H+ P T+ +HH HGH FG+ H +P H
Sbjct: 117 PPAEADQAA-APPAT-----DATVIHMVHDYP-YTHDHHHGHGHHLFGRDH--WPASHH 166
>12_02_0488 +
19587337-19587648,19587739-19587798,19587876-19587941,
19588017-19588082,19588253-19588345
Length = 198
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 186 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 299
K ++ D N++ + SK R VSK H SAES
Sbjct: 80 KRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAES 117
>11_06_0209 +
21282079-21282369,21287029-21287137,21287462-21287580,
21287722-21287829,21287943-21288062,21288838-21289011,
21289111-21289212
Length = 340
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 180 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRA---VARIPRVRGGG 350
VF PIR D+V+ V +K + ++ +Q GTGRA R P+ RGG
Sbjct: 160 VFDVPIRKDIVHRVGTHSTKTISEVSGTGRKPYNQK-----GTGRARHGTLRGPQFRGGA 214
Query: 351 T 353
T
Sbjct: 215 T 215
>03_06_0099 - 31645398-31645955
Length = 185
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 362 RSGXPSVTCVVVDVCSPPRSPGGAGTVASTSDSGER 469
R G P + C DV SP R GGA A +S SG R
Sbjct: 20 RLGLP-LLCGQSDVASP-RGGGGAAAAARSSSSGRR 53
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = -2
Query: 369 PDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 268
P + +HHHGH + + H G PP
Sbjct: 33 PQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPPPP 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,085,323
Number of Sequences: 37544
Number of extensions: 416816
Number of successful extensions: 1433
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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