Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_L05
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    27   0.15 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.78 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   5.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.2  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 453 EVDATVPAPPGLRGGEHTSTTTHVT 379
           ++D  +P PP +RGGE T  T   T
Sbjct: 370 DLDEPLPPPPPIRGGEWTFDTLRKT 394


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
 Frame = -2

Query: 444 ATVPAPPGLRGGEHTSTTTHVTEG----XPDR-------TYGYHHHGHAEFGQ 319
           A+V A PG  G   TST T +  G     P +        YG H  GHA+ G+
Sbjct: 170 ASVKAEPGSTGTTTTSTGTRLLHGILSQHPQQHGLGVQNGYGRHLPGHAQMGR 222



 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 408 EHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRY 304
           +H + T   T G P     +HHH H     QH+ Y
Sbjct: 337 QHGNHTMGPTMGPP-----HHHHHHQTQSLQHLHY 366



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 407 SPPRSPGGAGT 439
           SPPR PGG  T
Sbjct: 397 SPPRGPGGVPT 407


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/16 (37%), Positives = 7/16 (43%)
 Frame = +2

Query: 302 GYRTCCCPNSACPWWW 349
           G+    C N    WWW
Sbjct: 353 GFLQPVCQNEMNKWWW 368


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 4/16 (25%), Positives = 13/16 (81%)
 Frame = +2

Query: 8   SHLRWHGGWSLSPLLV 55
           +H+RW+  ++++P ++
Sbjct: 507 NHIRWNSAFAIAPAVI 522


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 83  SSEMSLSVARPLLSVYSEKSETVQGCSQ 166
           +S M  +  +  L+VY E  E VQ CS+
Sbjct: 631 NSIMQRASMKENLNVYPEFQENVQLCSE 658


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 4/16 (25%), Positives = 13/16 (81%)
 Frame = +2

Query: 8   SHLRWHGGWSLSPLLV 55
           +H+RW+  ++++P ++
Sbjct: 597 NHIRWNSAFAIAPAVI 612


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,312
Number of Sequences: 438
Number of extensions: 3471
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)