Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_L05
(616 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g02870.1 68418.m00230 60S ribosomal protein L4/L1 (RPL4D) 60S... 114 4e-26
At3g09630.1 68416.m01142 60S ribosomal protein L4/L1 (RPL4A) str... 114 4e-26
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 29 2.4
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 29 2.4
At4g22120.1 68417.m03198 early-responsive to dehydration protein... 29 3.2
At4g39480.1 68417.m05585 cytochrome P450 family protein contains... 28 4.3
At4g39430.1 68417.m05580 expressed protein ; expression support... 28 4.3
At1g21326.1 68414.m02666 VQ motif-containing protein contains PF... 28 4.3
At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid t... 28 5.7
At1g57750.1 68414.m06552 cytochrome P450, putative similar to cy... 28 5.7
At4g04340.3 68417.m00621 early-responsive to dehydration protein... 27 7.5
At4g04340.2 68417.m00620 early-responsive to dehydration protein... 27 7.5
At4g04340.1 68417.m00619 early-responsive to dehydration protein... 27 7.5
At2g35270.1 68415.m04326 DNA-binding protein-related contains Pf... 27 7.5
At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH) domain... 27 7.5
At4g18390.1 68417.m02729 TCP family transcription factor, putati... 27 9.9
At4g04920.1 68417.m00715 expressed protein 27 9.9
At3g05650.1 68416.m00629 disease resistance family protein conta... 27 9.9
>At5g02870.1 68418.m00230 60S ribosomal protein L4/L1 (RPL4D) 60S
roibosomal protein L4, Arabidopsis thaliana,
EMBL:CAA79104
Length = 407
Score = 114 bits (275), Expect = 4e-26
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
LP V AP+RPD+VN VH +S NSRQPY VSK+AGHQTSAESWGTGRAV+RIPRV GGG
Sbjct: 30 LPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGG 89
Query: 351 THRSGQ 368
THR+GQ
Sbjct: 90 THRAGQ 95
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/78 (46%), Positives = 42/78 (53%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
AFGNMCRGGRMFAPTK WRRWH ARGH IE +PE+
Sbjct: 97 AFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPALVMARGHKIENVPEM 156
Query: 553 PLVVADKVQEINKXKQAV 606
PLVV+D + + K A+
Sbjct: 157 PLVVSDSAEAVEKTSAAI 174
>At3g09630.1 68416.m01142 60S ribosomal protein L4/L1 (RPL4A) strong
similarity to 60S ribosomal protein L1 GB:P49691
Length = 406
Score = 114 bits (275), Expect = 4e-26
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = +3
Query: 171 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 350
LP V AP+RPD+VN VH +S NSRQPY VSK+AGHQTSAESWGTGRAV+RIPRV GGG
Sbjct: 29 LPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGG 88
Query: 351 THRSGQ 368
THR+GQ
Sbjct: 89 THRAGQ 94
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/78 (46%), Positives = 42/78 (53%)
Frame = +1
Query: 373 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 552
AFGNMCRGGRMFAPTK WRRWH ARGH IE +PE+
Sbjct: 96 AFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPALVMARGHKIENVPEM 155
Query: 553 PLVVADKVQEINKXKQAV 606
PLVV+D + + K A+
Sbjct: 156 PLVVSDSAEAVEKTSAAI 173
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 393 WWTYVRPHEALAALAPSRQPPTAESGLGSSRCC 491
WW +V LA+ APS P + L SR C
Sbjct: 465 WWNWVDRQNPLASPAPSYSQPQRDFRLTPSRLC 497
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 393 WWTYVRPHEALAALAPSRQPPTAESGLGSSRCC 491
WW +V LA+ APS P + L SR C
Sbjct: 464 WWNWVDRQNPLASPAPSYSQPQRDFRLTPSRLC 496
>At4g22120.1 68417.m03198 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 771
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -2
Query: 423 GLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPM 298
GL G +H + P T G+HH + +RYP+
Sbjct: 644 GLLGTKHAALAAPFLIALPVLTIGFHHFCKGRYEPAFIRYPL 685
>At4g39480.1 68417.m05585 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 989
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 168 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 263
P+PF K+P +PD++ H + NSR +C+
Sbjct: 384 PVPFNHKSPAKPDVLPSGH-KVKANSRILFCL 414
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 168 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 263
P+PF K+P +PD++ H + NS+ +C+
Sbjct: 857 PVPFQHKSPTKPDVLPSGH-KVDANSKILFCL 887
>At4g39430.1 68417.m05580 expressed protein ; expression supported
by MPSS
Length = 405
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 245 RVLGHRNVNIIDQVRTYGRLEYEREGLGCXPAPSHSSLNTPTVKVGLPI-DSFRYFSE 75
R+LG + + +R YG LEY ++ P L+ P V + + + ++ R SE
Sbjct: 38 RLLGLATMFATEMIRRYGLLEYRKDVYMFDSKPRTQILSLPAVSLNIDVMENSRRLSE 95
>At1g21326.1 68414.m02666 VQ motif-containing protein contains
PF05678: VQ motif
Length = 239
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 378 EGXPDRTYGYHHHGHAEFGQQH 313
EG D+ Y YHHH H + QQH
Sbjct: 144 EGTMDQYYHYHHHHHHQ-EQQH 164
>At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 161
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -2
Query: 552 KLGNLFNNVSSSLNERWXASSSNGCCQGRSPLSEVDATVPAPPGLR 415
KLG N +SS LN + SS CC L +VDA + LR
Sbjct: 84 KLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAAICLCTALR 129
>At1g57750.1 68414.m06552 cytochrome P450, putative similar to
cytochrome P450 GI:4688670 from [Catharanthus roseus]
Length = 497
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 168 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 263
PLPF K+P +PD++ H + NS+ C+
Sbjct: 367 PLPFNHKSPAKPDVLPSGH-KVDANSKIVICI 397
>At4g04340.3 68417.m00621 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 772
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -2
Query: 423 GLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPM 298
GL G +H ++ P T G+H F VRYP+
Sbjct: 645 GLLGTKHAASAAPFLIALPVITIGFHRFCKGRFEPAFVRYPL 686
>At4g04340.2 68417.m00620 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 772
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -2
Query: 423 GLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPM 298
GL G +H ++ P T G+H F VRYP+
Sbjct: 645 GLLGTKHAASAAPFLIALPVITIGFHRFCKGRFEPAFVRYPL 686
>At4g04340.1 68417.m00619 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 772
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -2
Query: 423 GLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPM 298
GL G +H ++ P T G+H F VRYP+
Sbjct: 645 GLLGTKHAASAAPFLIALPVITIGFHRFCKGRFEPAFVRYPL 686
>At2g35270.1 68415.m04326 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 285
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2
Query: 414 GGEHTSTTTHVTEGXPDRTYGYHHHGH 334
GG+ T+ H +G + +HHH H
Sbjct: 21 GGQFTTDNHHEDDGGAGGNHHHHHHNH 47
>At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to CLATHRIN
COAT ASSEMBLY PROTEIN AP180 - Mus musculus,
SWISSPROT:Q61548
Length = 599
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 155 PAPSHSSLNTPTVKVGLPIDSFRYFSEAIPPKY 57
PAPS ++ N + +P+D F E PP Y
Sbjct: 519 PAPSTANGNAGNINSPVPMDPFAASLEVAPPAY 551
>At4g18390.1 68417.m02729 TCP family transcription factor, putative
similar to TFPD (GI:6681577) [Arabidopsis thaliana];
teosinte branched1 protein - Zea mays, PIR2:T04347
Length = 365
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = -2
Query: 564 YNQGKLGNLFNNVSSSLNE--RWXASSSNGCCQGRSPLSEVDATVPAPPGLRGGEHTSTT 391
+N +L N+ S +N +W AS+ + SP+ + + G + ST
Sbjct: 174 HNHTSFTDLLNSGSDPVNSNRQWMASAPSS-----SPMEYFSSGLILGSGQQTHFPISTN 228
Query: 390 THVTEGXPDRTYGYHHHGHAEF 325
+H D + + HH H EF
Sbjct: 229 SHPFSSISDHHHHHPHHQHQEF 250
>At4g04920.1 68417.m00715 expressed protein
Length = 1250
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 186 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE-SWGTGRAVARIPRVRGG 347
K P D + + +S S S VS EA Q++A +WG+G RGG
Sbjct: 403 KKPSDQDSSDAISLSCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTRGG 457
>At3g05650.1 68416.m00629 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-4A protein
[Lycopersicon esculentum] gi|3097197|emb|CAA73187
Length = 868
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 453 PTAESGLGSSRCCYW 497
PT ES +S CCYW
Sbjct: 66 PTTESWANNSDCCYW 80
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,319,134
Number of Sequences: 28952
Number of extensions: 281771
Number of successful extensions: 854
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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