Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_L04
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894...   151   6e-37
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341...   124   5e-29
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892...   124   6e-29
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151...    35   0.049
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744...    35   0.049
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929...    32   0.46 
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438...    32   0.46 
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198...    31   0.80 
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128...    28   7.5  

>09_04_0677 -
           19388888-19389019,19389124-19389216,19389317-19389445,
           19389559-19389728,19390280-19390481,19390576-19390623,
           19390797-19390799
          Length = 258

 Score =  151 bits (365), Expect = 6e-37
 Identities = 75/150 (50%), Positives = 93/150 (62%)
 Frame = +3

Query: 204 AIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILXKYR 383
           A+ P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK  A  LFK+L KYR
Sbjct: 37  ALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYR 96

Query: 384 PETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTIRSGTNXXXXXXXXXXXXXXXIAHDVDP 563
           PE                         K+P  ++ G N               IAHDVDP
Sbjct: 97  PE-DKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDP 155

Query: 564 IELVLFLPALCRKMGVPYCIVKGKXRLGAL 653
           IELV++LPALCRKM VPYCIVKGK RLG++
Sbjct: 156 IELVVWLPALCRKMEVPYCIVKGKARLGSI 185



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 158 NPLFEKRPKNFAIG 199
           NPLFEKRPK F IG
Sbjct: 22  NPLFEKRPKQFGIG 35


>08_02_0211 -
           14333553-14333684,14333795-14333887,14334019-14334105,
           14334220-14334389,14334985-14335186,14335604-14335606
          Length = 228

 Score =  124 bits (300), Expect = 5e-29
 Identities = 63/136 (46%), Positives = 80/136 (58%)
 Frame = +3

Query: 204 AIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILXKYR 383
           A+ P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK  A  LFK+L KYR
Sbjct: 21  ALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYR 80

Query: 384 PETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTIRSGTNXXXXXXXXXXXXXXXIAHDVDP 563
           PE                         K+P  ++ G N               IAHDVDP
Sbjct: 81  PE-DKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDP 139

Query: 564 IELVLFLPALCRKMGV 611
           IELV++LPALCRKM +
Sbjct: 140 IELVVWLPALCRKMEI 155



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 158 NPLFEKRPKNFAIG 199
           NPLFEKRPK F IG
Sbjct: 6   NPLFEKRPKQFGIG 19


>01_07_0018 -
           40488702-40488833,40488928-40489020,40489125-40489253,
           40489379-40489500,40490292-40490544,40490636-40490638
          Length = 243

 Score =  124 bits (299), Expect = 6e-29
 Identities = 67/150 (44%), Positives = 88/150 (58%)
 Frame = +3

Query: 204 AIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILXKYR 383
           A+ P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLDK       ++L + +
Sbjct: 38  ALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLDKNLGCQKERLLKRAQ 97

Query: 384 PETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTIRSGTNXXXXXXXXXXXXXXXIAHDVDP 563
            E                         K+P  ++ G +               IAHDVDP
Sbjct: 98  AEAEGKTV-----------------EAKKPIVVKYGLDHVTYLIEQSKAQLVVIAHDVDP 140

Query: 564 IELVLFLPALCRKMGVPYCIVKGKXRLGAL 653
           IELV++LPALCRKM +PYCIVKGK RLG++
Sbjct: 141 IELVVWLPALCRKMEIPYCIVKGKARLGSI 170



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 158 NPLFEKRPKNFAIG 199
           NPLFEKRPK F IG
Sbjct: 23  NPLFEKRPKQFGIG 36


>10_01_0125 +
           1509642-1509759,1509847-1509950,1510693-1510824,
           1510936-1510962
          Length = 126

 Score = 35.1 bits (77), Expect = 0.049
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 480 IRSGTNXXXXXXXXXXXXXXXIAHDVDPIELVLFLPALCRKMGVPYCIVKGKXRLG 647
           ++ G N               +A D +P+E++L LP L     VPY  V  K  LG
Sbjct: 33  LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALG 88


>03_02_0321 +
           7443835-7443837,7443957-7444077,7444168-7444271,
           7445056-7445187,7445285-7445311
          Length = 128

 Score = 35.1 bits (77), Expect = 0.049
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 480 IRSGTNXXXXXXXXXXXXXXXIAHDVDPIELVLFLPALCRKMGVPYCIVKGKXRLG 647
           ++ G N               +A D +P+E++L LP L     VPY  V  K  LG
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALG 90


>06_01_1127 +
           9294079-9294193,9294300-9294369,9294611-9294716,
           9295665-9295805,9296377-9296475
          Length = 176

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 543 IAHDVDPIELVLFLPALCRKMGVPYCIVKGKXRL 644
           IA ++ PI+++  +P LC +  +PY  V  K  L
Sbjct: 66  IAGNISPIDVITHVPILCEEANIPYVYVPSKEDL 99


>02_05_0610 -
           30342105-30342266,30343024-30343129,30343788-30343857,
           30343978-30344092
          Length = 150

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 543 IAHDVDPIELVLFLPALCRKMGVPYCIVKGKXRL 644
           IA ++ PI+++  +P LC +  +PY  V  K  L
Sbjct: 66  IAGNISPIDVITHVPILCEEANIPYIYVPSKEDL 99


>06_03_0392 +
           20318728-20319309,20319596-20319725,20319844-20319895,
           20319995-20320061,20320547-20320633,20322526-20322567,
           20322635-20322740,20323155-20323219,20323299-20323343,
           20323442-20323549,20323636-20323723,20324147-20324193,
           20324355-20324363
          Length = 475

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 257 PHPAPEGCTSASSESAPSDQP 319
           P PAPE   +A+ E+APSD P
Sbjct: 53  PQPAPEEAPAAAEEAAPSDDP 73


>02_04_0587 +
           24110333-24110584,24111193-24111261,24112347-24112850,
           24113094-24113336
          Length = 355

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -1

Query: 203 PDQ*QSSLASSRREDSRSSWAQPF*PPMGRR 111
           P    SSLA +RR  +R   AQP  PP  RR
Sbjct: 24  PSSAASSLAFARRAAARPLRAQPLLPPAARR 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,521,028
Number of Sequences: 37544
Number of extensions: 313769
Number of successful extensions: 883
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)