Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_K21
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.31 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = +1

Query: 298 YHCELFYKSADGPNETCFAMRGFQNIPITVVMTPLGDTAIINAILKSLKMETHSTCLRIT 477
           Y  E  + S+D P  TCF   G  N   T+    +  T   N  L+ +  E  + C+  T
Sbjct: 680 YRQEAQWTSSDNPCTTCFCENG-NNKCFTMECPQV--TCPDNMKLEKVPGECCAICVNAT 736

Query: 478 QYVVSSTVQNVP--CMF 522
             V S+  +NVP  C+F
Sbjct: 737 SLVESN--RNVPQKCIF 751


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 417 YKCYPQKLKNGDPFYMFTY 473
           Y C P+KL  G PFY  T+
Sbjct: 255 YGCSPKKLIVGIPFYGRTF 273


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 61  FDTEVNGSLMMDLMIEESTTEKVPK 135
           FD   NG  ++ + I  ST   VP+
Sbjct: 428 FDIVPNGKTVIPIKISPSTANMVPQ 452


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 453 PFYMFTYHSICCIKY 497
           PF +FT H + C  Y
Sbjct: 88  PFIIFTVHFLLCTYY 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,549
Number of Sequences: 336
Number of extensions: 3161
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)