Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_K21
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    29   2.2  
U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain (pr...    28   5.0  
Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical pr...    27   8.8  
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend...    27   8.8  
AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transpo...    27   8.8  
AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transpor...    27   8.8  

>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 244 LIHLNDSGGTKDNIPPENYHCELFYKSADGPNETCFAMRGFQNIPI 381
           L + N+ G T DN P  N H +LF    D P +   +++   +IP+
Sbjct: 201 LFNNNNLGSTDDNAP--NSHLDLFGFGDDPPRDKPSSLKNLHDIPL 244


>U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform c
           protein.
          Length = 912

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
 Frame = +1

Query: 451 THSTCLRITQYVVSS--TVQNVPCMFRDLKNFAHTVKNNIISPVKSSI---LKYY--GYP 609
           T+ TC     Y ++S  T ++   M ++++   H V+  ++SP+ S      +YY   YP
Sbjct: 800 TYYTCTDNVVYDITSWATCKSQRAMLKNMRAHTHNVQYRLLSPMNSDFDAQSQYYNSSYP 859

Query: 610 SAS 618
           S+S
Sbjct: 860 SSS 862


>Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical
           protein F52B5.1 protein.
          Length = 1119

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 428 IAFIMAVSPKGVITTVMGIF*KPRIAKQVSFGPSADL*NSSQ**FSGGILSLVPPL 261
           ++FI   + +   T +  IF    I K V      D+ N S+    GG  S VPP+
Sbjct: 536 VSFITRFTEESFATLIAVIFIYEAIMKLVKIKGQLDMINYSRDFVEGGFCSCVPPI 591


>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
           chloride bicarbonateanion exchanger alternative variant
           a protein.
          Length = 1161

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 428 IAFIMAVSPKGVITTVMGIF*KPRIAKQVSFGPSADL*NSSQ**FSGGILSLVPPL 261
           ++FI   + +   T +  IF    I K V      D+ N S+    GG  S VPP+
Sbjct: 578 VSFITRFTEESFATLIAVIFIYEAIMKLVKIKGQLDMINYSRDFVEGGFCSCVPPI 633


>AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion
           transporter ABTS-1 protein.
          Length = 1119

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 428 IAFIMAVSPKGVITTVMGIF*KPRIAKQVSFGPSADL*NSSQ**FSGGILSLVPPL 261
           ++FI   + +   T +  IF    I K V      D+ N S+    GG  S VPP+
Sbjct: 536 VSFITRFTEESFATLIAVIFIYEAIMKLVKIKGQLDMINYSRDFVEGGFCSCVPPI 591


>AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transporter
           protein.
          Length = 1119

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 428 IAFIMAVSPKGVITTVMGIF*KPRIAKQVSFGPSADL*NSSQ**FSGGILSLVPPL 261
           ++FI   + +   T +  IF    I K V      D+ N S+    GG  S VPP+
Sbjct: 536 VSFITRFTEESFATLIAVIFIYEAIMKLVKIKGQLDMINYSRDFVEGGFCSCVPPI 591


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,821,091
Number of Sequences: 27780
Number of extensions: 287465
Number of successful extensions: 667
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)