Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_K20
         (648 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0167 + 1374578-1375243,1375895-1376277,1377947-1378007,137...    29   4.2  
09_06_0045 + 20462866-20463309,20463417-20463722,20465262-204654...    28   5.6  
03_01_0207 - 1633177-1633372,1633623-1633688,1633778-1633859,163...    28   5.6  
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649     27   9.7  

>03_01_0167 +
           1374578-1375243,1375895-1376277,1377947-1378007,
           1378721-1379386
          Length = 591

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 119 LCYDSYPSSRHESSRGGFVGVSTSASI 199
           L +D+Y  S H+   GGF GVS +  +
Sbjct: 482 LDFDAYDDSHHQQQHGGFGGVSLTLGL 508


>09_06_0045 +
           20462866-20463309,20463417-20463722,20465262-20465423,
           20465539-20465814,20466149-20466499
          Length = 512

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 208 DSMYGSRRADANETAPTTFVSA*RVGIV 125
           D +Y   RAD  ++ PTT+++A  VG++
Sbjct: 469 DDVYEDDRADFRKSEPTTYINAPLVGVL 496


>03_01_0207 -
           1633177-1633372,1633623-1633688,1633778-1633859,
           1633942-1634037,1634413-1634518,1634602-1634661,
           1635114-1635234,1635929-1636040,1636118-1636217,
           1636328-1636382,1636489-1636595,1636798-1636850,
           1636989-1637114,1637909-1638065,1638226-1638421,
           1638917-1639073,1639139-1639379,1639475-1639605,
           1639704-1639826,1639929-1639984,1640610-1640767,
           1640847-1640984,1641070-1641123
          Length = 896

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 564 IAIITHNWVTYTNVIQPIALPSGS 635
           + II  NW +Y   ++P+ +P+GS
Sbjct: 344 VGIIKRNWNSYCGSLEPMPMPAGS 367


>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
          Length = 461

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 366 NSVCGSSMLSNTRSLTAAHC 425
           N+ CGS +++ TRS+T A C
Sbjct: 272 NNNCGSRIITTTRSVTVASC 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,015,517
Number of Sequences: 37544
Number of extensions: 343018
Number of successful extensions: 680
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)