Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_K20
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    36   0.033
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    34   0.100
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    32   0.40 
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    30   1.6  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
 Frame = +3

Query: 288 IVNGNPAPLGAHPYMVGLXIEMPGNFNSVCGSSMLSNTRSLTAAHCWFDGSRQALSFTLA 467
           +V G     GA P+   L  +     +  CG+S+L  T  +TAAHC F+   +  S+ + 
Sbjct: 27  VVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITAAHC-FEEDERVSSYEVV 83

Query: 468 ---XXXXXXXXXXXXXXXXNVXMHENWSPINFSNDIAI--ITHNWVTYTNVIQPIALPS 629
                               +  +  +  I FS+DIAI  I +  + +    QPI LPS
Sbjct: 84  VGDWDNNQTDGNEQIFYLQRIHFYPLYKDI-FSHDIAILEIPYPGIEFNEYAQPICLPS 141


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 33.9 bits (74), Expect = 0.100
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 297 GNPAPLGAHPYMVGLXIEM-PGNFNSVCGSSMLSNTRSLTAAHCW 428
           GNP  L   P+ V + ++   G+F  +CG ++++    LTAAHC+
Sbjct: 37  GNPTHLA--PWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHCF 79


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
 Frame = +3

Query: 375 CGSSMLSNTRSLTAAHCWFDGSRQALSFTLAXXXXXXXXXXXXXXXXNVXMHENWSPINF 554
           CG S++     LTAAHC F   R+  S+++                  V +H  W  I F
Sbjct: 84  CGGSLIDPNFVLTAAHC-FAKDRRPTSYSVRVGGHRSGSGSPHRVTA-VSIHP-WYNIGF 140

Query: 555 --SNDIAII-THNWVTYTNVIQPIALPSGSLLDN 647
             S D AI+  H  V  +   +PI LPS   ++N
Sbjct: 141 PSSYDFAIMRIHPPVNTSTTARPICLPSLPAVEN 174


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +3

Query: 288 IVNGNPAPLGAHPYMVGLXIEMPGNFNSVCGSSMLSNTRSLTAAHCWFDGSRQALS 455
           I+NG  A       +  +    P    +VCG  +++ +  +T+AHC F G   A++
Sbjct: 17  IINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHCVFSGDDFAVT 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,571,432
Number of Sequences: 27780
Number of extensions: 296064
Number of successful extensions: 626
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)