Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_K16
(496 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XC... 53 9e-08
At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XC... 53 9e-08
At4g23520.1 68417.m03390 cysteine proteinase, putative contains ... 48 3e-06
At2g34080.1 68415.m04172 cysteine proteinase, putative contains ... 46 2e-05
At1g29110.1 68414.m03563 cysteine proteinase, putative contains ... 46 2e-05
At1g29090.1 68414.m03561 peptidase C1A papain family protein con... 45 3e-05
At2g27420.1 68415.m03314 cysteine proteinase, putative contains ... 44 7e-05
At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XC... 44 7e-05
At3g43960.1 68416.m04706 cysteine proteinase, putative contains ... 43 1e-04
At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol p... 42 2e-04
At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP pr... 40 0.001
At1g29080.1 68414.m03560 peptidase C1A papain family protein con... 38 0.004
At4g16190.1 68417.m02457 cysteine proteinase, putative contains ... 38 0.005
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 36 0.015
At3g45310.1 68416.m04892 cysteine proteinase, putative similar t... 36 0.020
At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG1... 33 0.080
At5g50260.1 68418.m06224 cysteine proteinase, putative similar t... 32 0.24
At3g48340.1 68416.m05276 cysteine proteinase, putative similar t... 30 0.74
At5g66210.2 68418.m08341 calcium-dependent protein kinase family... 30 0.98
At5g66210.1 68418.m08340 calcium-dependent protein kinase family... 30 0.98
At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containi... 28 3.0
At4g10790.1 68417.m01759 UBX domain-containing protein low simil... 27 6.9
At3g48350.1 68416.m05277 cysteine proteinase, putative similar t... 27 6.9
At2g35650.1 68415.m04372 glycosyl transferase family 2 protein s... 27 6.9
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 27 9.2
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 27 9.2
At2g47860.2 68415.m05974 phototropic-responsive NPH3 family prot... 27 9.2
At2g47860.1 68415.m05973 phototropic-responsive NPH3 family prot... 27 9.2
>At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 288
Score = 53.2 bits (122), Expect = 9e-08
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 70 ALLIATVVMASSAETDTPRHY-DLNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLA 246
ALL S TP H + ++ ELFE ++ EH++ YK ++ ++ F+++L
Sbjct: 21 ALLCCAFARDFSIVGYTPEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLM 80
Query: 247 EINQLNXKNPYTTFGINKFADYTPEEQQSR-LGLRLP 354
I+Q N + G+N+FAD T EE + R LGL P
Sbjct: 81 HIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKP 117
>At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 355
Score = 53.2 bits (122), Expect = 9e-08
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 70 ALLIATVVMASSAETDTPRHY-DLNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLA 246
ALL S TP H + ++ ELFE ++ EH++ YK ++ ++ F+++L
Sbjct: 21 ALLCCAFARDFSIVGYTPEHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLM 80
Query: 247 EINQLNXKNPYTTFGINKFADYTPEEQQSR-LGLRLP 354
I+Q N + G+N+FAD T EE + R LGL P
Sbjct: 81 HIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKP 117
>At4g23520.1 68417.m03390 cysteine proteinase, putative contains
similarity to cysteine proteinase (thiol protease) RD21A
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 356
Score = 48.0 bits (109), Expect = 3e-06
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Frame = +1
Query: 73 LLIATVVMASSAETDTPR----HYDLNQAKE-LFEIFVKEHNREYKDD-ADRELHYQSFK 234
LLI V+ A S+ D P H N+ E +F++++ +H + Y + ++E +Q+FK
Sbjct: 14 LLIVFVLSAPSSAMDLPATSGGHNRSNEEVEFIFQMWMSKHGKTYTNALGEKERRFQNFK 73
Query: 235 KHLAEINQLNXKNPYTTFGINKFADYTPEE 324
+L I+Q N KN G+ +FAD T +E
Sbjct: 74 DNLRFIDQHNAKNLSYQLGLTRFADLTVQE 103
>At2g34080.1 68415.m04172 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 345
Score = 45.6 bits (103), Expect = 2e-05
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 52 MNFVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSF 231
M V+V +++ T S A + T + + + E ++ +REY+D+ ++ + F
Sbjct: 5 MVLVTVLIILFTGFRISQATSRTVIFREQSMVDK-HEQWMARFSREYRDELEKNMRRDVF 63
Query: 232 KKHLAEINQLNXK-NPYTTFGINKFADYTPEE 324
KK+L I N K N G+N+FAD+T EE
Sbjct: 64 KKNLKFIENFNKKGNKSYKLGVNEFADWTNEE 95
>At1g29110.1 68414.m03563 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 334
Score = 45.6 bits (103), Expect = 2e-05
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Frame = +1
Query: 61 VSV-ALLIATVVMASSAETDTPR-HYDLNQAK--ELFEIFVKEHNREYKDDADRELHYQS 228
VSV ++ +A +++ R H LN+ + + ++ + +R YKD++++E+ +
Sbjct: 2 VSVRSVFVALTILSMDLRISQARPHVTLNEQSIVDYHQQWMTQFSRVYKDESEKEMRLKV 61
Query: 229 FKKHLAEINQLNXK-NPYTTFGINKFADYTPEE-QQSRLGLRL 351
FKK+L I N N T G+N+F D+ EE + GLR+
Sbjct: 62 FKKNLKFIENFNNMGNQSYTLGVNEFTDWKTEEFLATHTGLRV 104
>At1g29090.1 68414.m03561 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 355
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +1
Query: 58 FVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSFKK 237
F+ V+L I ++ + S T ++ A E + ++ +R Y D+ ++++ + FKK
Sbjct: 15 FMLVSLTILSMNLKVSQATSRVTFHEPIVA-EHHQQWMTRFSRVYSDELEKQMRFDVFKK 73
Query: 238 HLAEINQLNXKNPYT-TFGINKFADYTPEE 324
+L I + N K T G+N+FAD+T EE
Sbjct: 74 NLKFIEKFNKKGDRTYKLGVNEFADWTREE 103
>At2g27420.1 68415.m03314 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 348
Score = 43.6 bits (98), Expect = 7e-05
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +1
Query: 64 SVALLIATVVMASSAETDTPRHYDLN-QAKELFEIFVKEHNREYKDDADRELHYQSFKKH 240
S + I T+ ++ T R A E E ++ NR Y D+ ++ + FKK+
Sbjct: 3 STIIFILTIFLSYRTSLATSRGSLFEASAIEKHEQWMARFNRVYSDETEKRNRFNIFKKN 62
Query: 241 LAEINQLNXKNPYT-TFGINKFADYTPEE-QQSRLGLRLPAKKT*VLRLQS 387
L + N N T IN+F+D T EE + + GL +P T + L S
Sbjct: 63 LEFVQNFNMNNKITYKVDINEFSDLTDEEFRATHTGLVVPEAITRISTLSS 113
>At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XCP2)
identical to papain-type cysteine endopeptidase XCP2
GI:6708183 from [Arabidopsis thaliana]
Length = 356
Score = 43.6 bits (98), Expect = 7e-05
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 151 ELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNXKNPYTTFGINKFADYTPEE-Q 327
ELFE ++ + Y+ ++ L ++ FK +L I++ N K G+N+FAD + EE +
Sbjct: 49 ELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFK 108
Query: 328 QSRLGLR 348
+ LGL+
Sbjct: 109 KMYLGLK 115
>At3g43960.1 68416.m04706 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 376
Score = 42.7 bits (96), Expect = 1e-04
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Frame = +1
Query: 52 MNFVSVALLIATVVMAS---SAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHY 222
++F ++ALL +V++ S T T + + ++E ++ E+ + Y ++E +
Sbjct: 3 ISFRTLALLTLSVLLISISLGVVTATESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRF 62
Query: 223 QSFKKHLAEINQLNXKNPYTTF--GINKFADYTPEE-QQSRLGLRLPAK 360
+ FK +L I + N +P ++ G+NKF+D T +E Q S LG ++ K
Sbjct: 63 KIFKDNLKRIEEHN-SDPNRSYERGLNKFSDLTADEFQASYLGGKMEKK 110
>At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol
protease, putative similar to cysteine proteinase RD21A
precursor (thiol protease) GI:435619, SP:P43297 from
[Arabidopsis thaliana]
Length = 463
Score = 42.3 bits (95), Expect = 2e-04
Identities = 31/124 (25%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Frame = +1
Query: 7 LGTSKPVPLLIHCAKMNFVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNR 186
+G K P+++ A + VS A+ ++ + + T ++ + ++E ++ EH +
Sbjct: 1 MGFLKLSPMILLLAMIG-VSYAMDMSIISYDENHHITTETSRSDSEVERIYEAWMVEHGK 59
Query: 187 EYKDD----ADRELHYQSFKKHLAEINQLNXKNPYTTFGINKFADYTPEEQQSR-LGLRL 351
+ + A+++ ++ FK +L I++ N KN G+ +FAD T EE +S LG +
Sbjct: 60 KKMNQNGLGAEKDQRFEIFKDNLRFIDEHNTKNLSYKLGLTRFADLTNEEYRSMYLGAK- 118
Query: 352 PAKK 363
P K+
Sbjct: 119 PTKR 122
>At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP
protein (AALP) identical to AALP protein GI:7230640 from
[Arabidopsis thaliana]; similar to barley aleurain
Length = 358
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 157 FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNXKNPYTTFGINKFADYTPEE-QQS 333
F F + ++Y++ + +L + FK++L I N K G+N+FAD T +E Q++
Sbjct: 59 FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRT 118
Query: 334 RLG 342
+LG
Sbjct: 119 KLG 121
>At1g29080.1 68414.m03560 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 346
Score = 37.9 bits (84), Expect = 0.004
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 52 MNFVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQSF 231
+ FV V L I + + S T Y + + + ++ + +R Y D+ +++L Q
Sbjct: 4 VEFVCVVLTIFFMDLKISEATSRVALYKPSSIVDYHQQWMIQFSRVYDDEFEKQLRLQVL 63
Query: 232 KKHLAEINQLNXK-NPYTTFGINKFADYTPEE 324
++L I N N G+N+F D+T EE
Sbjct: 64 TENLKFIESFNNMGNQSYKLGVNEFTDWTKEE 95
>At4g16190.1 68417.m02457 cysteine proteinase, putative contains
similarity to papain-like cysteine proteinase isoform I
GI:7381219 from [Ipomoea batatas]
Length = 373
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 136 LNQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNXKNPYTTFGINKFADYT 315
L A+ F +F ++ + Y + + ++ FK +L + +P G+ +F+D T
Sbjct: 48 LLNAEHHFTLFKSKYEKTYATQVEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLT 107
Query: 316 PEE-QQSRLGLR 348
P+E ++ LGL+
Sbjct: 108 PKEFRRKFLGLK 119
>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 371
Score = 35.9 bits (79), Expect = 0.015
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 142 QAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNXKNPYTTFGINKFADYTPE 321
+A +FE ++ +H + Y A++E F+ +L I N +N G+N+FAD +
Sbjct: 51 EATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLH 110
Query: 322 E 324
E
Sbjct: 111 E 111
>At3g45310.1 68416.m04892 cysteine proteinase, putative similar to
AALP protein GI:7230640 from [Arabidopsis thaliana] and
barley aleurain
Length = 358
Score = 35.5 bits (78), Expect = 0.020
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 157 FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNXKNPYTTFGINKFADYTPEE-QQS 333
F F + ++Y+ + +L + FK++L I N K +N+FAD T +E Q+
Sbjct: 59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRY 118
Query: 334 RLG 342
+LG
Sbjct: 119 KLG 121
>At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG12)
/ cysteine proteinase, putative identical to
senescence-specific protein SAG12 GI:1046373 from
[Arabidopsis thaliana]
Length = 346
Score = 33.5 bits (73), Expect = 0.080
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 166 FVKEHNREYKDDADRELHYQSFKKHLAEINQLNXKNPYTTF--GINKFADYTPEEQQS 333
++ +H R Y D + Y FK ++ I LN TF +N+FAD T +E +S
Sbjct: 41 WMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEFRS 98
>At5g50260.1 68418.m06224 cysteine proteinase, putative similar to
cysteine endopeptidase precursor CysEP GI:2944446 from
[Ricinus communis]
Length = 361
Score = 31.9 bits (69), Expect = 0.24
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 139 NQAKELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNXKNPYTTFGINKFADYTP 318
N EL+E + + H+ + ++ + FK ++ I++ N K+ +NKF D T
Sbjct: 32 NSLWELYERW-RSHHTVARSLEEKAKRFNVFKHNVKHIHETNKKDKSYKLKLNKFGDMTS 90
Query: 319 EE 324
EE
Sbjct: 91 EE 92
>At3g48340.1 68416.m05276 cysteine proteinase, putative similar to
cysteine endopeptidase precursor [Ricinus communis]
GI:2944446; contains Pfam profile PF00112: Papain family
cysteine protease
Length = 351
Score = 30.3 bits (65), Expect = 0.74
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 172 KEHNREYKDDADRELHYQSFKKHLAEINQLNXKNPYTTFGINKFADYTPEE 324
+ H+ + +RE + F+ ++ ++ N KN +NKFAD T E
Sbjct: 42 RSHHSVPRSLNEREKRFNVFRHNVMHVHNTNKKNRSYKLKLNKFADLTINE 92
>At5g66210.2 68418.m08341 calcium-dependent protein kinase family
protein / CDPK family protein contains Pfam domains,
PF00069: Protein kinase domain and PF00036: EF hand
Length = 523
Score = 29.9 bits (64), Expect = 0.98
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 214 LHYQSFKKHLAEINQLNXKNPYTTFGINKFADYTPEEQQSRLGLR 348
LH ++H +E QL + + F ++K TPEE + GLR
Sbjct: 432 LHVHQLEEHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLR 476
>At5g66210.1 68418.m08340 calcium-dependent protein kinase family
protein / CDPK family protein contains Pfam domains,
PF00069: Protein kinase domain and PF00036: EF hand
Length = 523
Score = 29.9 bits (64), Expect = 0.98
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 214 LHYQSFKKHLAEINQLNXKNPYTTFGINKFADYTPEEQQSRLGLR 348
LH ++H +E QL + + F ++K TPEE + GLR
Sbjct: 432 LHVHQLEEHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLR 476
>At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containing
protein and genefinder
Length = 559
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 410 FVWNSIPID*SRRTYVFLAGSLNPNLLCCSSGV*SANLLMPNV 282
FVWN+I SR ++ +A S+ ++LC S V L P+V
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
>At4g10790.1 68417.m01759 UBX domain-containing protein low
similarity to SP|Q9UNN5 FAS-associated factor 1 (FAF1
protein) {Homo sapiens}; contains Pfam profile PF00789:
UBX domain
Length = 480
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 424 HNTFISFGIAFR*TEVAELMSS*QAASIPTCSAVPQEYNQQI 299
+ F+S+G + R +E ++ +S +A+ P C+ V NQ+I
Sbjct: 234 NENFVSWGGSIRSSEGFKMSNSLKASRFPFCAVVMPAANQRI 275
>At3g48350.1 68416.m05277 cysteine proteinase, putative similar to
cysteine endopeptidase precursor [Ricinus communis]
GI:2944446; contains Pfam profile PF00112: Papain family
cysteine protease
Length = 364
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 220 YQSFKKHLAEINQLNXKNPYTTFGINKFADYTPEEQQS 333
+ F+ ++ +++ N KN IN+FAD T E +S
Sbjct: 58 FNVFRHNVLHVHRTNKKNKPYKLKINRFADITHHEFRS 95
>At2g35650.1 68415.m04372 glycosyl transferase family 2 protein
similar to beta-(1-3)-glucosyl transferase GB:AAC62210
GI:3687658 from [Bradyrhizobium japonicum], cellulose
synthase from Agrobacterium tumeficiens [gi:710492] and
Agrobacterium radiobacter [gi:710493]; contains Pfam
glycosyl transferase, group 2 family protein domain
PF00535; identical to cDNA for partial mRNA for
glycosyltransferase (cslA07 gene) GI:28551963
Length = 556
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = -2
Query: 378 SQNLCLLSRQPQSQPALLFLRSIISKFVNAKRSIWILXVQLVYLCQVFLE*LIMQLSVGI 199
S L LS+ S+ ++ FL + S+ + A+ +W ++ V + VF +++ L + +
Sbjct: 16 SSFLLSLSQAGSSKTSVAFLNAFKSEDIIARIGLWWQLIRAVVVVPVFKFLVLLCLVMSV 75
Query: 198 ILVFPVMF 175
+ VM+
Sbjct: 76 MFFVEVMY 83
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 181 NREYKDDADRELHYQS 228
N E+KD+ +R LHY+S
Sbjct: 10 NMEFKDEEERNLHYKS 25
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 181 NREYKDDADRELHYQS 228
N E+KD+ +R LHY+S
Sbjct: 10 NMEFKDEEERNLHYKS 25
>At2g47860.2 68415.m05974 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 517
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 130 YDLNQAKELFEIFVKEHNREYKDDADRE 213
YD + + +F +F+ EY+DD D E
Sbjct: 221 YDTDSVQRIFSMFLNLDECEYRDDDDDE 248
>At2g47860.1 68415.m05973 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 635
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 130 YDLNQAKELFEIFVKEHNREYKDDADRE 213
YD + + +F +F+ EY+DD D E
Sbjct: 339 YDTDSVQRIFSMFLNLDECEYRDDDDDE 366
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,646,813
Number of Sequences: 28952
Number of extensions: 174732
Number of successful extensions: 491
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 868578304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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