Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_K13
(363 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 5e-16
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 6e-16
SB_56| Best HMM Match : Actin (HMM E-Value=0) 80 6e-16
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 80 6e-16
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 6e-16
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 8e-16
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 7e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 9e-10
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 44 3e-05
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.21
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.21
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 31 0.28
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.49
SB_46582| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.65
SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1) 29 0.85
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 29 1.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.0
SB_38782| Best HMM Match : PAN (HMM E-Value=2.3e-05) 27 3.4
SB_1849| Best HMM Match : His_leader (HMM E-Value=6.2) 27 3.4
SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25) 27 4.6
SB_59015| Best HMM Match : Arif-1 (HMM E-Value=0.62) 27 6.0
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 6.0
SB_34833| Best HMM Match : E6 (HMM E-Value=7.2) 26 8.0
SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038) 26 8.0
SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1) 26 8.0
SB_5505| Best HMM Match : ResIII (HMM E-Value=0.55) 26 8.0
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 80.2 bits (189), Expect = 5e-16
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +3
Query: 129 KLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
++ LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 69.7 bits (163), Expect = 7e-13
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 232 PAIRAVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHG 342
P + VMVGMGQKDSYV DEAQSKRGILTLKYPIEHG
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 79.8 bits (188), Expect = 6e-16
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 69.7 bits (163), Expect = 7e-13
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 232 PAIRAVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHG 342
P + VMVGMGQKDSYV DEAQSKRGILTLKYPIEHG
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 79.8 bits (188), Expect = 6e-16
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 69.7 bits (163), Expect = 7e-13
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 232 PAIRAVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHG 342
P + VMVGMGQKDSYV DEAQSKRGILTLKYPIEHG
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 79.8 bits (188), Expect = 6e-16
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 69.7 bits (163), Expect = 7e-13
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 232 PAIRAVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHG 342
P + VMVGMGQKDSYV DEAQSKRGILTLKYPIEHG
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 79.8 bits (188), Expect = 6e-16
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +3
Query: 120 ATXKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
A + LV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 ADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 69.7 bits (163), Expect = 7e-13
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 232 PAIRAVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHG 342
P + VMVGMGQKDSYV DEAQSKRGILTLKYPIEHG
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 79.4 bits (187), Expect = 8e-16
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
LV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 69.7 bits (163), Expect = 7e-13
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 232 PAIRAVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHG 342
P + VMVGMGQKDSYV DEAQSKRGILTLKYPIEHG
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 59.7 bits (138), Expect = 7e-10
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 9e-10
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 44.4 bits (100), Expect = 3e-05
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 236
+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 703 IVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 44.0 bits (99), Expect = 4e-05
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 268 KDSYVXDEAQSKRGILTLKYPIEHG 342
KD V DEA R +L + YP+++G
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNG 77
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -2
Query: 239 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQA 138
MA + D GE+G+ SI+S ETGLAHTGAI+ Q+
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQS 34
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.21
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.21
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 31.1 bits (67), Expect = 0.28
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 181 SQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVXDEAQ 297
S E + APCSPRS P I M G G + S+V +E +
Sbjct: 803 SLESSIEAPCSPRSASKPVISGEMNG-GPRASHVIEETE 840
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_46582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 29.9 bits (64), Expect = 0.65
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 189 LLRNRPCTYRSHCLLPSAATXSSHI 115
+LRNRP T+R LPS T +H+
Sbjct: 58 ILRNRPITFRLQVCLPSLQTAFNHL 82
>SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1)
Length = 535
Score = 29.5 bits (63), Expect = 0.85
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 243 PDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLL--PSAATXSSHIVEL 106
P+G + P+ + +++ HH + T R HC+L P T SH++ +
Sbjct: 110 PNGVSSPKKK--KKKHHHKHEEKHFTDRDHCILDNPKEKTHLSHLMHI 155
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 129 KLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGR 248
K+ LV+D G+ K GFA + APR++ P+ + + + + R
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERR 270
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_38782| Best HMM Match : PAN (HMM E-Value=2.3e-05)
Length = 596
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 297 LCLISYIRVLLSHTDHHGPDGGAFPRSRGTRRE 199
LC++ R + +H PDGG GT+RE
Sbjct: 539 LCMVLCARTSACVSFNHRPDGGICQLKNGTKRE 571
>SB_1849| Best HMM Match : His_leader (HMM E-Value=6.2)
Length = 135
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -1
Query: 309 TSFALCLISYIRVLLSHTDHHGPDGGAFPRSRGTRREEHH 190
+ F+L + + + ++DH PD A+ R T ++ HH
Sbjct: 3 SGFSLSVQAVLTSETWYSDHQNPDSEAYQSLRATIQDNHH 42
>SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25)
Length = 389
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 239 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQARQLXRR 120
++ P DR HG +CE LA G I Y R+ R+
Sbjct: 46 LSAPPDDRWYHGKLDRKTCEERLAADGRIGAYLVRESDRK 85
>SB_59015| Best HMM Match : Arif-1 (HMM E-Value=0.62)
Length = 526
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1
Query: 273 VLLSHTDHHGPDGGAFPRSRGTRREEHHLLRNRPCTYRS 157
V L +T HH P G A R H L RN T RS
Sbjct: 252 VRLYNTIHHRPTGNAAQTMICASRNSHTLSRNDHSTSRS 290
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 239
+++D GS KAGFA ++A + + S++G H
Sbjct: 485 IIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_34833| Best HMM Match : E6 (HMM E-Value=7.2)
Length = 135
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 189 LLRNRPCTYRSHCLLP 142
L R R C YRSH LLP
Sbjct: 52 LFRGRYCQYRSHNLLP 67
>SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038)
Length = 274
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 187 PAKPALHIPEPLSTTKRGNXFVAH 116
P P IP PLS TKR + V H
Sbjct: 33 PVTPTTPIPLPLSATKRDSTRVYH 56
>SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1)
Length = 644
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 101 KTNSTMCDEXVAALGSRQWLRYVQGXXXXXXXXXXXVPLDRGKA 232
K++S +CD +A L R + Y +PLD+GK+
Sbjct: 398 KSSSDLCD-ALALLTRRLYTEYTDPMTIEPILASRLIPLDKGKS 440
>SB_5505| Best HMM Match : ResIII (HMM E-Value=0.55)
Length = 1346
Score = 26.2 bits (55), Expect = 8.0
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 327 VFEGQDTSFALCLISYIRVLLSHTDHHGPDGGAFPRSRG 211
V EG D FA C++SY+ LL + H G P++RG
Sbjct: 238 VREGGDV-FANCVVSYVARLLRNRGHSRSLG--LPKTRG 273
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,814,062
Number of Sequences: 59808
Number of extensions: 243854
Number of successful extensions: 617
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 570200590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -