Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_K13
         (363 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          80   3e-17
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          80   3e-17
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          80   3e-17
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           80   3e-17
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.22 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   0.87 
EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.          23   3.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   3.5  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 79.8 bits (188), Expect = 3e-17
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +3

Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
           LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43



 Score = 69.7 bits (163), Expect = 3e-14
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = +1

Query: 232 PAIRAVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHG 342
           P  + VMVGMGQKDSYV DEAQSKRGILTLKYPIEHG
Sbjct: 39  PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 79.8 bits (188), Expect = 3e-17
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +3

Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
           LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43



 Score = 69.7 bits (163), Expect = 3e-14
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = +1

Query: 232 PAIRAVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHG 342
           P  + VMVGMGQKDSYV DEAQSKRGILTLKYPIEHG
Sbjct: 39  PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 79.8 bits (188), Expect = 3e-17
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +3

Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
           LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43



 Score = 69.7 bits (163), Expect = 3e-14
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = +1

Query: 232 PAIRAVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHG 342
           P  + VMVGMGQKDSYV DEAQSKRGILTLKYPIEHG
Sbjct: 39  PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 79.8 bits (188), Expect = 3e-17
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +3

Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 245
           LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43



 Score = 66.5 bits (155), Expect = 3e-13
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = +1

Query: 232 PAIRAVMVGMGQKDSYVXDEAQSKRGILTLKYPIEHG 342
           P  + VMVGMG KD+YV DEAQSKRGILTLKYPIEHG
Sbjct: 39  PRHQGVMVGMGNKDAYVGDEAQSKRGILTLKYPIEHG 75


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 177 GFAGDDAPRAVFPSIVGRPRHQGRDGRYGTEGL 275
           G+ G      V P + G P   GRDG  GT+GL
Sbjct: 157 GYPGIPGTNGV-PGVPGAPGLAGRDGCNGTDGL 188



 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 225 GRPRHQGRDGRYGTEGL 275
           G+P  +GRDG +G  GL
Sbjct: 344 GQPGPRGRDGNFGPVGL 360


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 226 PTIEGNTARGASSPAKPALHIPEPLSTTKRGNXFV 122
           P+I  +TA  +SSPA  ++   EP + +   N FV
Sbjct: 230 PSISWSTADPSSSPAYSSITHYEPTARSLANNTFV 264


>EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 230 PSHDRGEHGARSIISC 183
           P+H RGEHG +    C
Sbjct: 121 PNHARGEHGQQPAERC 136


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 213 PSIVGRPRHQGRDGRYGTEGL 275
           P ++G P  +G  G+ G +GL
Sbjct: 196 PGVIGLPGQKGDMGQAGNDGL 216


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,001
Number of Sequences: 2352
Number of extensions: 8164
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)