Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_K10
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical pr... 200 7e-52
AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4 ... 30 1.0
AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin pro... 30 1.0
Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical pr... 29 2.3
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 28 5.4
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 28 5.4
AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical... 28 5.4
Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical pr... 27 9.5
U80453-12|AAN63454.1| 419|Caenorhabditis elegans Hypothetical p... 27 9.5
>Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical
protein T01C3.6 protein.
Length = 144
Score = 200 bits (487), Expect = 7e-52
Identities = 87/130 (66%), Positives = 113/130 (86%)
Frame = +3
Query: 57 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 236
+Q+VQ FGRKKTATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F V
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64
Query: 237 DIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVXEASKKEIKDILXQYDRSLLVADPRR 416
DIR+ V GGGHV Q+YA+RQA++KAL+A+Y KYV E SK+E+K+I YD+SLLVADPRR
Sbjct: 65 DIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRR 124
Query: 417 CEPKKFGGPG 446
E KKFGGPG
Sbjct: 125 RESKKFGGPG 134
>AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4
protein.
Length = 348
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -1
Query: 272 YMTTTLDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGG 93
YMTT+ + NHR + L E ++ L + S + + AP Q T A G
Sbjct: 148 YMTTSTGKANGTNHRMYGLCESQNMRLSMKVSASQPHPTRRAPTRRQEDFVTTASAELMG 207
Query: 92 G 90
G
Sbjct: 208 G 208
>AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin
protein 4 protein.
Length = 348
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -1
Query: 272 YMTTTLDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGG 93
YMTT+ + NHR + L E ++ L + S + + AP Q T A G
Sbjct: 148 YMTTSTGKANGTNHRMYGLCESQNMRLSMKVSASQPHPTRRAPTRRQEDFVTTASAELMG 207
Query: 92 G 90
G
Sbjct: 208 G 208
>Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical
protein BE10.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 333 YVXEASKKEIKDILXQYDRSLLVADPRRCE 422
+ E +KE+ D+ QYDRS+ + D R E
Sbjct: 151 FCDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 266 TTTLDCHSDVNHREFFLAEQKD-RF--LKFVLQQSG 168
TT LDC + H EF+ AE D RF + F+ +Q G
Sbjct: 146 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 181
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 266 TTTLDCHSDVNHREFFLAEQKD-RF--LKFVLQQSG 168
TT LDC + H EF+ AE D RF + F+ +Q G
Sbjct: 21 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 56
>AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical
protein Y37A1B.9 protein.
Length = 520
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 212 RQGKILYG*HQSDSQ---GWWSCXTSLRYQTSYFKGSDRLLPEICXRSLK 352
R+ +I+ H + GW S L Y+T+Y + L P+ C L+
Sbjct: 259 RENEIIINIHDNPEMTRLGWTSLEYKLGYRTTYIMNLENLHPDFCLSFLE 308
>Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical protein
F16D3.4 protein.
Length = 1232
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +3
Query: 129 MLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISK 308
++ + P+D + R + ++L+ P+L LG E + + + + V GG Q +K
Sbjct: 1004 LMNIYSEPMDFISDRTV-FQLK-PLLDLGSEYYEQLILGIVVSAGGLAEGT----QKTAK 1057
Query: 309 ALIAFYQKYVXE 344
L+ +Q+ + E
Sbjct: 1058 QLLLDHQREICE 1069
>U80453-12|AAN63454.1| 419|Caenorhabditis elegans Hypothetical
protein C23H3.9c protein.
Length = 419
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 268 MXHKFTLSDKLFQRL*SPSTRNMXTKPQRRKSKTS 372
+ HK ++++ QR SP TR P + SKTS
Sbjct: 203 LPHKSSMNNNNGQRFLSPETREQSLDPSGQGSKTS 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,702,957
Number of Sequences: 27780
Number of extensions: 268363
Number of successful extensions: 633
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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