Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_K09
(645 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VUR1 Cluster: CG7764-PA; n=16; Eumetazoa|Rep: CG7764-... 225 9e-58
UniRef50_Q92759 Cluster: TFIIH basal transcription factor comple... 175 6e-43
UniRef50_Q4T9L6 Cluster: Chromosome undetermined SCAF7537, whole... 170 2e-41
UniRef50_Q59FI1 Cluster: Valyl-tRNA synthetase-like protein; n=5... 131 1e-29
UniRef50_UPI000069F4D5 Cluster: UPI000069F4D5 related cluster; n... 126 6e-28
UniRef50_Q5BXW7 Cluster: SJCHGC02916 protein; n=1; Schistosoma j... 106 5e-22
UniRef50_Q2PIU7 Cluster: RNA polymerase II transcription initiat... 85 1e-15
UniRef50_Q2GT67 Cluster: Putative uncharacterized protein; n=4; ... 84 3e-15
UniRef50_Q6BGW8 Cluster: RNA polymerase II transcription factor ... 83 6e-15
UniRef50_Q680U9 Cluster: MRNA, complete cds, clone: RAFL22-33-O0... 80 5e-14
UniRef50_Q02939 Cluster: RNA polymerase II transcription factor ... 77 5e-13
UniRef50_P87303 Cluster: RNA polymerase II transcription factor ... 75 1e-12
UniRef50_Q0UJE9 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q259V6 Cluster: B0213E10.4 protein; n=2; Oryza sativa|R... 67 4e-10
UniRef50_Q259E1 Cluster: H0801D08.21 protein; n=4; Oryza sativa|... 57 4e-07
UniRef50_Q7RBX7 Cluster: Drosophila melanogaster LD30622p-relate... 41 0.029
UniRef50_Q8I4Y8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.051
UniRef50_Q9NA35 Cluster: Putative uncharacterized protein; n=2; ... 40 0.068
UniRef50_A4S452 Cluster: Predicted protein; n=1; Ostreococcus lu... 38 0.16
UniRef50_Q4UII0 Cluster: TFIIH subunit, Tf2b homologue, putative... 38 0.16
UniRef50_A5K8U5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_P13873 Cluster: Polymerase acidic protein; n=274; Influ... 37 0.36
UniRef50_A3BKJ7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_Q7QT69 Cluster: GLP_13_1698_1147; n=2; Giardia lamblia ... 37 0.48
UniRef50_A5P1H4 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 36 0.63
UniRef50_Q75RY2 Cluster: Protein PAIR1; n=5; Oryza sativa|Rep: P... 36 0.63
UniRef50_UPI0000EBDB83 Cluster: PREDICTED: hypothetical protein ... 35 1.5
UniRef50_A0TSJ1 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q6NN60 Cluster: RH61815p; n=3; Sophophora|Rep: RH61815p... 35 1.5
UniRef50_UPI0000D8E35E Cluster: PREDICTED: hypothetical protein;... 35 1.9
UniRef50_UPI000069F76B Cluster: UPI000069F76B related cluster; n... 35 1.9
UniRef50_Q6ENY6 Cluster: Putative uncharacterized protein P0603H... 35 1.9
UniRef50_Q7R3Z4 Cluster: GLP_68_37985_35016; n=1; Giardia lambli... 35 1.9
UniRef50_UPI0000E80C91 Cluster: PREDICTED: hypothetical protein;... 34 2.6
UniRef50_Q4SRQ3 Cluster: Chromosome undetermined SCAF14504, whol... 34 2.6
UniRef50_Q657A3 Cluster: Putative uncharacterized protein P0022F... 34 2.6
UniRef50_Q5K741 Cluster: Putative uncharacterized protein; n=2; ... 34 2.6
UniRef50_Q5P3Z8 Cluster: Putative uncharacterized protein; n=1; ... 29 3.9
UniRef50_Q0FWR4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q67VH2 Cluster: Putative uncharacterized protein OSJNBa... 33 4.5
UniRef50_Q0SG89 Cluster: Possible transcriptional regulator; n=1... 33 5.9
UniRef50_Q5KF22 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_Q8A1J0 Cluster: Putative outer membrane protein, probab... 33 7.8
UniRef50_Q5GWM6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q3JNQ9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_A5NQR2 Cluster: Transposase, IS4 family protein; n=4; M... 33 7.8
UniRef50_A0TK10 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q54C29 Cluster: General transcription factor IIH, polyp... 33 7.8
UniRef50_A7ARI7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q2H8P1 Cluster: Predicted protein; n=1; Chaetomium glob... 33 7.8
UniRef50_Q86UN2 Cluster: Reticulon-4 receptor-like 1 precursor; ... 33 7.8
>UniRef50_Q9VUR1 Cluster: CG7764-PA; n=16; Eumetazoa|Rep: CG7764-PA
- Drosophila melanogaster (Fruit fly)
Length = 499
Score = 225 bits (549), Expect = 9e-58
Identities = 103/174 (59%), Positives = 134/174 (77%), Gaps = 6/174 (3%)
Frame = +2
Query: 140 LQCKDLHEYLKSR-SPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVT 316
L+CKD EYL++R +P+ LE LYNYP ICLAV+RELPE+AR F+IR+LFV+QPVPQAVVT
Sbjct: 32 LECKDFQEYLRTRQTPESLEKLYNYPPICLAVFRELPEIARQFIIRILFVDQPVPQAVVT 91
Query: 317 SWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGGGRAWSMS 496
SW +Q AKEQA+A + L+ L+VW+ IPGG+ W L+ +FKK+++ LLGGG+ W M+
Sbjct: 92 SWGAQRCAKEQAEATSCLTALNVWRVTAIPGGLSAWELSPTFKKSVRQVLLGGGKPWPMT 151
Query: 497 SSLEPDGKARDVSFLDAYALERWECVLHYMVGS-----AQTEGISADAVRILLH 643
++L+ D K RD++FLD YA+ RW CVLHYMVG+ E IS DAVRILLH
Sbjct: 152 NTLDKDSKPRDIAFLDTYAMSRWRCVLHYMVGTGNRNGTDAEAISPDAVRILLH 205
>UniRef50_Q92759 Cluster: TFIIH basal transcription factor complex
p52 subunit; n=13; Mammalia|Rep: TFIIH basal
transcription factor complex p52 subunit - Homo sapiens
(Human)
Length = 462
Score = 175 bits (427), Expect = 6e-43
Identities = 83/167 (49%), Positives = 117/167 (70%), Gaps = 1/167 (0%)
Frame = +2
Query: 140 LQCKDLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTS 319
LQC++L E+L SP L+ LY +P CLAV+RELP LA+++V+R+LF+EQP+PQA V
Sbjct: 14 LQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAAVAL 73
Query: 320 WVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGGGRAWS-MS 496
WV + ++K Q ++ LS L +W +PGG+ G +L F++NL+++LLGGG+AWS +
Sbjct: 74 WVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRIALLGGGKAWSDDT 133
Query: 497 SSLEPDGKARDVSFLDAYALERWECVLHYMVGSAQTEGISADAVRIL 637
S L PD ARDV LD YA ERWE VLH+MVGS + +S D ++L
Sbjct: 134 SQLGPDKHARDVPSLDKYAEERWEVVLHFMVGS-PSAAVSQDLAQLL 179
>UniRef50_Q4T9L6 Cluster: Chromosome undetermined SCAF7537, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7537,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 471
Score = 170 bits (414), Expect = 2e-41
Identities = 84/183 (45%), Positives = 117/183 (63%), Gaps = 15/183 (8%)
Frame = +2
Query: 140 LQCKDLHEYLKSRSPQFLETLYNYPTICLAVYR--------------ELPELARHFVIRL 277
LQCK+LH+YLK SP+ L+ LYN+P CLAVYR ELP L+++FV+R+
Sbjct: 23 LQCKNLHQYLKELSPEVLDRLYNHPATCLAVYRWPGRGPRRPRVLAPELPSLSKNFVMRM 82
Query: 278 LFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLK 457
LF+EQP+PQA V WV + ++ + L+ L +W + GG+ G++L FK+NLK
Sbjct: 83 LFLEQPLPQAAVALWVGKDSQRDHDECVCVLAGLRLWHSQHLQGGLQGYVLNPVFKENLK 142
Query: 458 VSLLGGGRAWS-MSSSLEPDGKARDVSFLDAYALERWECVLHYMVGSAQTEGISADAVRI 634
+LLGGGRAW+ +L PD ARD+ LD YA ERWE +LH+MVGS +S D ++
Sbjct: 143 TALLGGGRAWAEEGGALGPDRHARDIGSLDRYATERWEVILHFMVGS-PCAAVSQDLAQL 201
Query: 635 LLH 643
L+H
Sbjct: 202 LVH 204
>UniRef50_Q59FI1 Cluster: Valyl-tRNA synthetase-like protein; n=54;
Coelomata|Rep: Valyl-tRNA synthetase-like protein - Homo
sapiens (Human)
Length = 1653
Score = 131 bits (317), Expect = 1e-29
Identities = 63/132 (47%), Positives = 91/132 (68%), Gaps = 1/132 (0%)
Frame = +2
Query: 245 PELARHFVIRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGW 424
P L +++V+R+LF+EQP+PQA V WV + ++K Q ++ LS L +W +PGG+ G
Sbjct: 96 PILGKNWVMRMLFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGL 155
Query: 425 MLAQSFKKNLKVSLLGGGRAWS-MSSSLEPDGKARDVSFLDAYALERWECVLHYMVGSAQ 601
+L F++NL+++LLGGG+AWS +S L PD ARDV LD YA ERWE VLH+MVGS
Sbjct: 156 ILNPIFRQNLRIALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGS-P 214
Query: 602 TEGISADAVRIL 637
+ +S D ++L
Sbjct: 215 SAAVSQDLAQLL 226
>UniRef50_UPI000069F4D5 Cluster: UPI000069F4D5 related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069F4D5 UniRef100 entry -
Xenopus tropicalis
Length = 419
Score = 126 bits (303), Expect = 6e-28
Identities = 55/112 (49%), Positives = 80/112 (71%)
Frame = +2
Query: 140 LQCKDLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTS 319
L+CK+LHE+L+ SP L+ LYN+P CLAV+RELP LA+++V+R+LF+EQP+PQA V
Sbjct: 8 LKCKNLHEFLQELSPGVLDQLYNHPATCLAVFRELPGLAKNYVMRMLFLEQPLPQAAVAL 67
Query: 320 WVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGG 475
WV + KE + L+ L +W +PGG+ G +L F++NLK++LLGG
Sbjct: 68 WVKKENFKEHEENTQVLTGLRLWHTQQLPGGLQGLILNPIFRENLKIALLGG 119
>UniRef50_Q5BXW7 Cluster: SJCHGC02916 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02916 protein - Schistosoma
japonicum (Blood fluke)
Length = 141
Score = 106 bits (254), Expect = 5e-22
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Frame = +2
Query: 155 LHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQT 334
+ EYLK+ L+ LY +P CL V+RELPELA+H V+RLLF+EQP+P+++V+ WV +
Sbjct: 9 IFEYLKNVGAHMLDELYTHPPTCLVVFRELPELAKHIVMRLLFIEQPIPKSIVSGWVEKG 68
Query: 335 YAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGGGRAWSMSSSLEPD 514
+ +C+ L+ L +W W L + +++++++SL GGG+ + +
Sbjct: 69 SSALLNDSCSALTVLRIWHSTDTNVSGGSWSLNKKYQESIRISLFGGGKPLLGDLGIVTN 128
Query: 515 GK-ARDVSFLDAY 550
K ++ V FL +Y
Sbjct: 129 DKYSKSVDFLKSY 141
>UniRef50_Q2PIU7 Cluster: RNA polymerase II transcription
initiation/nucleotide excision repair factor TFIIH;
n=11; Pezizomycotina|Rep: RNA polymerase II
transcription initiation/nucleotide excision repair
factor TFIIH - Aspergillus oryzae
Length = 480
Score = 85.0 bits (201), Expect = 1e-15
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Frame = +2
Query: 161 EYLKSRSPQFLETLYNYPTICLAVYRE-LPELARHFVIRLLFVEQPVPQAVVTSWVSQTY 337
+YL+S LY P+ LA++R LP+LA+ FV+ LL+++ P+P + +WV
Sbjct: 12 DYLESLPGTTFYKLYQQPSTALAIFRRMLPDLAKCFVMALLYLKDPLPATDLEAWVKAES 71
Query: 338 AKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGGGRAWSMSSSLE-PD 514
KE+ A + L L + I + + + F +L+ +L G + S D
Sbjct: 72 LKERDNALSILGRLHILSNTVITDNVRAYKVTDPFASSLRQALTGAEKTQSFGVLWHISD 131
Query: 515 GKARDVSFLDAYALERWECVLHYMVGSAQTEGISADA 625
G A ++ LD YA +WE VL YMVG++ GI DA
Sbjct: 132 GAAVSIAELDEYARRQWEGVLGYMVGTSGL-GIQRDA 167
>UniRef50_Q2GT67 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 503
Score = 83.8 bits (198), Expect = 3e-15
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 6/162 (3%)
Frame = +2
Query: 143 QCKDLHEYLKSRSPQFLETLYNYPTICLAVYRE-LPELARHFVIRLLFVEQPVPQAVVTS 319
Q L EYL+ LY P+ A++R LP LA+ FV LL++ P+ A +
Sbjct: 6 QSYQLSEYLEKLPGTTFRKLYQQPSTAFAIFRRMLPPLAKVFVQALLYMPSPLLLAELDV 65
Query: 320 WVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWM-LAQSFKKNLKVSLLGGG--RAWS 490
WV ++ +A + L L + Q P P M L +FK +L+++L GGG ++
Sbjct: 66 WVRAEGKMQRDRALSILRSLHIIQITPPGKDKPQEMQLTTNFKNSLRLALEGGGSHNSFG 125
Query: 491 MSSSLEPDGKARDVSFLDAYALERWECVLHYMVGS--AQTEG 610
+ S+L P D++ LD YA ++WE +LHY+V S AQ+EG
Sbjct: 126 VPSTL-PVAPRIDIAHLDGYARKKWEDILHYVVNSVPAQSEG 166
>UniRef50_Q6BGW8 Cluster: RNA polymerase II transcription factor B
subunit 2; n=4; Saccharomycetales|Rep: RNA polymerase II
transcription factor B subunit 2 - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 515
Score = 83.0 bits (196), Expect = 6e-15
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +2
Query: 155 LHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQT 334
++E+L+ Q LY P CL++YR LP +A+ +++ +LF E PV + W T
Sbjct: 11 VNEHLEGLPKQVQSRLYEAPATCLSIYRLLPPIAKFYIMTMLFYETPVALKDLDKWCKPT 70
Query: 335 YAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGG-GRAWSMSSSLEP 511
K Q + L L + +E + L +F++N + L G R + S P
Sbjct: 71 SRKFQFDSLKRLRALHLIEEDSSGSHI---RLHPTFRQNFRDCLTGSQARNAFGNLSTTP 127
Query: 512 DGKARDVSFLDAYALERWECVLHYMVGS 595
D ++ + FLD++AL++WE +LH+MVG+
Sbjct: 128 DEQSVSIKFLDSFALQKWESILHFMVGT 155
>UniRef50_Q680U9 Cluster: MRNA, complete cds, clone: RAFL22-33-O09;
n=9; Magnoliophyta|Rep: MRNA, complete cds, clone:
RAFL22-33-O09 - Arabidopsis thaliana (Mouse-ear cress)
Length = 452
Score = 79.8 bits (188), Expect = 5e-14
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Frame = +2
Query: 191 LETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTL 370
L+ LYN IC A+ R LP LA+ +V+++L+++ PVP ++ WV + A L
Sbjct: 23 LDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPATMMEEWVLADGTSKHRVAIDRL 82
Query: 371 SELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGGGRAWSMSSSLEPDGKARDVSFLDAY 550
+L ++ E + L +F+ NL+ ++ GG + + K + L+ Y
Sbjct: 83 IQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVLPREPMNSDNAIKLPSLQELETY 142
Query: 551 ALERWECVLHYMVGSAQTE---GISADAVRI 634
AL++WEC L ++ S Q E GIS+ ++I
Sbjct: 143 ALKQWECFLLQLINSGQGEKLTGISSSMMKI 173
>UniRef50_Q02939 Cluster: RNA polymerase II transcription factor B
subunit 2; n=7; Saccharomycetales|Rep: RNA polymerase II
transcription factor B subunit 2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 513
Score = 76.6 bits (180), Expect = 5e-13
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Frame = +2
Query: 161 EYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQTYA 340
+YL+ Q LY P CLA+YR LP LA+ F++ ++F E VP + WV+
Sbjct: 12 QYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLLDLDKWVNSNGK 71
Query: 341 KEQAKACTTLSELSVWQEAPIPGGMPGWM---LAQSFKKNLKVSLLGGGRAWSMSSSLEP 511
+ A ++ L + IP G + L +FK +L+ +L GG S +E
Sbjct: 72 LQFQNAIKSMKSLHLL----IPNKSSGTLMINLNPTFKISLRNALTGGEVQNSFGVVVEE 127
Query: 512 DGKARDVSFLDAYALERWECVLHYMVGSAQTEGISADAVRILLH 643
+ + D+ LD Y+ +WE +LH+MVG+ + S + +L H
Sbjct: 128 NVVSLDL--LDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKH 169
>UniRef50_P87303 Cluster: RNA polymerase II transcription factor B
subunit 2; n=3; Dikarya|Rep: RNA polymerase II
transcription factor B subunit 2 - Schizosaccharomyces
pombe (Fission yeast)
Length = 447
Score = 75.4 bits (177), Expect = 1e-12
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Frame = +2
Query: 200 LYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSEL 379
LY P CLAV+R LP LAR +V+ +LF PV + W+ + Q+++ L +
Sbjct: 22 LYQKPAACLAVFRLLPILARQYVMSMLFNPMPVALSDFDLWIKLSSKVYQSESFNKLVRM 81
Query: 380 SVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGGGRAWSMS-SSLEPDGKARDVSFLDAYAL 556
++Q G L F+K +L GGG S + D V FLDAYA
Sbjct: 82 HIFQ---FDGQY--ITLNSEFRKQFITALTGGGNHNSFGVPCTDEDKHLVTVDFLDAYAK 136
Query: 557 ERWECVLHYMVGSAQTE 607
E WE +LH+MVG+ + +
Sbjct: 137 ETWETILHFMVGTPEAK 153
>UniRef50_Q0UJE9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 473
Score = 70.9 bits (166), Expect = 2e-11
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Frame = +2
Query: 161 EYLKSRSPQFLETLYNYPTICLAVYR-ELPELARHFVIRLLFVEQPVPQAVVTSWVSQTY 337
EYL+ Q LY P+ LAV+R LP LA+ V+ +L++ P A + +W +
Sbjct: 11 EYLQGLPLQTHRKLYEAPSTVLAVFRCMLPHLAKSIVMAMLYMPSSFPAADLEAWFKPSA 70
Query: 338 AKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGGG--RAWSMSSSLEP 511
E+ +A L L + + L F+++L+ ++ G G R + + +S
Sbjct: 71 RSERVQALDILERLHILGSKREDDKSLSYSLIPGFQRSLRHAIEGSGTHRTFGVPASKAE 130
Query: 512 DGKAR-DVSFLDAYALERWECVLHYMVGSA 598
G+ R + FLDA+A E+WE +L +MV A
Sbjct: 131 RGEKRLSIEFLDAHAREQWEGILFFMVSGA 160
>UniRef50_Q259V6 Cluster: B0213E10.4 protein; n=2; Oryza sativa|Rep:
B0213E10.4 protein - Oryza sativa (Rice)
Length = 470
Score = 66.9 bits (156), Expect = 4e-10
Identities = 38/126 (30%), Positives = 63/126 (50%)
Frame = +2
Query: 191 LETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTL 370
L+ LY+ IC AV R LP LA+ + +++L+V PV A + WV YA + A L
Sbjct: 23 LDMLYDSAFICEAVLRSLPPLAKKYALQMLYVSAPVAAAAMEEWVLDEYAAKHRVAIDRL 82
Query: 371 SELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGGGRAWSMSSSLEPDGKARDVSFLDAY 550
+L V+ E + + Q F+ N++ L+ GG + ++ L+++
Sbjct: 83 LQLRVFVEVRDRRKEVSYKMNQKFQGNMQKYLVDGGSLPREPIPSSVTARLPTLAELESF 142
Query: 551 ALERWE 568
ALE+WE
Sbjct: 143 ALEQWE 148
>UniRef50_Q259E1 Cluster: H0801D08.21 protein; n=4; Oryza
sativa|Rep: H0801D08.21 protein - Oryza sativa (Rice)
Length = 119
Score = 56.8 bits (131), Expect = 4e-07
Identities = 31/95 (32%), Positives = 49/95 (51%)
Frame = +2
Query: 191 LETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTL 370
L+ LY+ IC AV R LP LA+ + +++L+V PV A + WV YA + A L
Sbjct: 23 LDMLYDSAFICEAVLRSLPPLAKKYALQMLYVSAPVAAAAMEEWVLDEYAAKHRVAIDRL 82
Query: 371 SELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGG 475
+L V+ E + + Q F+ N++ L+ G
Sbjct: 83 LQLRVFVEVRDRRKEVSYKMNQKFQGNMQKYLVDG 117
>UniRef50_Q7RBX7 Cluster: Drosophila melanogaster LD30622p-related;
n=3; Plasmodium (Vinckeia)|Rep: Drosophila melanogaster
LD30622p-related - Plasmodium yoelii yoelii
Length = 926
Score = 40.7 bits (91), Expect = 0.029
Identities = 17/82 (20%), Positives = 44/82 (53%)
Frame = +2
Query: 152 DLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQ 331
++++Y+K + E L++ ++ L EL + + RLLF++Q V + + W++
Sbjct: 12 EIYDYMKEMDEKVWEYLFDDSLAHETIFSSLNELEQIIISRLLFIQQVVSERAMRLWINP 71
Query: 332 TYAKEQAKACTTLSELSVWQEA 397
+ K+ +++ L ++ + E+
Sbjct: 72 NFLKKLSESIKNLVDVKILVES 93
>UniRef50_Q8I4Y8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 945
Score = 39.9 bits (89), Expect = 0.051
Identities = 19/82 (23%), Positives = 41/82 (50%)
Frame = +2
Query: 152 DLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQ 331
+L++Y+K + ++ +Y L EL + + RLLF++Q V + + W++
Sbjct: 12 ELYDYMKELNENVWCYFFDDSLAHETIYHSLNELEQIIISRLLFIQQVVSERAMRLWINP 71
Query: 332 TYAKEQAKACTTLSELSVWQEA 397
Y K+ +++ L E + E+
Sbjct: 72 NYLKKLSESIKNLVEAKILVES 93
>UniRef50_Q9NA35 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 481
Score = 39.5 bits (88), Expect = 0.068
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Frame = +2
Query: 161 EYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQTYA 340
++L + P+ + L P+ +YR LP +A+ I+L++ + P A S V +T
Sbjct: 25 DFLITIPPKTRQRLLQKPSCAFFIYRMLPPIAQQTTIQLIW-KGSFPTA---SDVEET-- 78
Query: 341 KEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKN-LKVSLLGGGRAWSMSSSLEPDG 517
KE L +L + G + + +K++ + ++LG + S+ LEP+
Sbjct: 79 KEIEDQVKLLKDLGLVHRQTTDGKLN---IDTDYKRSYMYAAMLGAAQISSLV--LEPNE 133
Query: 518 KARDVSFLDAYALERWECVLHYM 586
R ++ A+ERW+C+L Y+
Sbjct: 134 GNRRGKDVEKKAVERWDCILRYL 156
>UniRef50_A4S452 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 495
Score = 38.3 bits (85), Expect = 0.16
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Frame = +2
Query: 164 YLKSRSPQFLETLY-NYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQTYA 340
+L + +P+ L+ LY + P LAV R +A+ ++RL +V+ W +
Sbjct: 22 FLCALAPRELDALYASSPWSALAVLRACDSIAKQIILRLAYVDDGADARECAKWCGDGAS 81
Query: 341 KEQA--KACTTLSELSVWQEAPIPGGMPGWMLA-QSFKKNLKVSL------LGGGRAWSM 493
+A +A L+ L V + G ++A ++F NL+ +L L G
Sbjct: 82 DARALERAMARLARLRV--TTALGEGEDARVVANEAFANNLRRALERGFVNLDDGDGADA 139
Query: 494 SSSLEPDGKARDVSFLDAYALERWECVLHYMVGSA 598
K D + L+AYA +WE +L + G++
Sbjct: 140 REDAGVAAKVPDRATLNAYAKAKWEDLLLTLTGAS 174
>UniRef50_Q4UII0 Cluster: TFIIH subunit, Tf2b homologue, putative;
n=3; Theileria|Rep: TFIIH subunit, Tf2b homologue,
putative - Theileria annulata
Length = 645
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 149 KDLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWV 325
++ YLK Q E L+ +A++R L EL + + RLL+++Q + + + W+
Sbjct: 23 ENFFNYLKELDEQVWERLFRVKACLVALFRSLGELEKLIIFRLLYIDQSISEKPLRLWM 81
>UniRef50_A5K8U5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 960
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/82 (23%), Positives = 40/82 (48%)
Frame = +2
Query: 152 DLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQ 331
++++Y+K S + L+ A+ L EL + + RLLF++Q V + + W++
Sbjct: 12 EIYDYMKEMSEKIWTYLFEDSLAHEAILHSLNELEQIIISRLLFIQQVVSERAMRLWINP 71
Query: 332 TYAKEQAKACTTLSELSVWQEA 397
K+ ++ L E + E+
Sbjct: 72 NSLKKLSECIKNLVEAKILVES 93
>UniRef50_P13873 Cluster: Polymerase acidic protein; n=274;
Influenza B virus|Rep: Polymerase acidic protein -
Influenza B virus (strain B/Ann Arbor/1/1966
[cold-adapted])
Length = 726
Score = 37.1 bits (82), Expect = 0.36
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +2
Query: 512 DGKARDVSFLDAYALERWECVLHYMVGSAQTEGISADAVRILL 640
+GK SF A + +C++HY+ G+AQ EG SA++ R+LL
Sbjct: 621 EGKLVKGSFGKALRVIFTKCLMHYVFGNAQLEGFSAESRRLLL 663
>UniRef50_A3BKJ7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 181
Score = 36.7 bits (81), Expect = 0.48
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +3
Query: 477 AGRGACRRRWSRTGRPGTCRS 539
AG G RRW R GRPG CRS
Sbjct: 125 AGEGGTERRWGRDGRPGRCRS 145
>UniRef50_Q7QT69 Cluster: GLP_13_1698_1147; n=2; Giardia lamblia
ATCC 50803|Rep: GLP_13_1698_1147 - Giardia lamblia ATCC
50803
Length = 183
Score = 36.7 bits (81), Expect = 0.48
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = -3
Query: 592 AHHVVQHALPALQRVRVQERHVPGLPVRLQRRRHAPRPASPKQ*HFEVLFK----RLCEH 425
+HH+V ALP + R R P P L RRRHA R +P+ + RL H
Sbjct: 55 SHHLVPGALPQARTARPGSRRDP--PRTLCRRRHARRSCTPEWRRAGTRLRMHSTRLHRH 112
Query: 424 PARHAPRYGGLLP 386
R +PR+ L P
Sbjct: 113 RGRRSPRWRHLRP 125
>UniRef50_A5P1H4 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 122
Score = 36.3 bits (80), Expect = 0.63
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = +3
Query: 318 PGSRKHMPKNKQKHALHCQSSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACR 497
PG+ + P + A C+++P GR RG AG R + + GR R
Sbjct: 33 PGAARSRPVRQPSGA--CRAAPRGRAAGIRGRGAAGSPWRRTRPAPRSRPGSRPGR---R 87
Query: 498 RRWSRTGRPGTCRS 539
RRW + RPG RS
Sbjct: 88 RRWGGSARPGPRRS 101
>UniRef50_Q75RY2 Cluster: Protein PAIR1; n=5; Oryza sativa|Rep:
Protein PAIR1 - Oryza sativa subsp. japonica (Rice)
Length = 492
Score = 36.3 bits (80), Expect = 0.63
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = -1
Query: 576 STHSQRSSAYASRNDTSRAFPSGSSDDDMLHALPPPSNDTLRFFLNDCASIQPGMPPGMG 397
S S A AS + F S DD++L LP P+ D RF L+D +S + P
Sbjct: 50 SQQSFSQGASASLLHSQSQFSQVSLDDNLLTLLPSPTRDQ-RFGLHDDSSKRMSSLPASS 108
Query: 396 ASCHTESS 373
ASC E S
Sbjct: 109 ASCAREES 116
>UniRef50_UPI0000EBDB83 Cluster: PREDICTED: hypothetical protein
LOC528601; n=1; Bos taurus|Rep: PREDICTED: hypothetical
protein LOC528601 - Bos taurus
Length = 519
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 375 SSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAG-RGACRRRWSRTGRPGTCRSWTRT 551
S+ C RRP GAC C+ +R +S C C G G C SRT R SW
Sbjct: 212 SATCXRRPSRGGAC-CTCA-ARSXGSSPCPCRASGGSXGWCSWTPSRTWRXTAPGSWLGR 269
Query: 552 RWSAGSACC 578
+ CC
Sbjct: 270 MGNLRGCCC 278
>UniRef50_A0TSJ1 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 599
Score = 35.1 bits (77), Expect = 1.5
Identities = 27/71 (38%), Positives = 32/71 (45%)
Frame = +3
Query: 318 PGSRKHMPKNKQKHALHCQSSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACR 497
P R P+ A S GRR P R A A + S R+S G + R A R
Sbjct: 254 PACRPRSPRRTA--ACRPMRSRRGRRRPRR-APPANAARSACARSSTP---GASARAAAR 307
Query: 498 RRWSRTGRPGT 530
RRW R+ RPGT
Sbjct: 308 RRWRRSRRPGT 318
>UniRef50_Q6NN60 Cluster: RH61815p; n=3; Sophophora|Rep: RH61815p -
Drosophila melanogaster (Fruit fly)
Length = 765
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 396 PPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWSRTGRPGTCRSWTRTRWSA 563
PP +G G S ++C G G G R TG+PG+ W R++W +
Sbjct: 676 PPGQGGLHVGGGGSGSLCGTECSSSGGGGGGGFRSGRRTTGQPGSQCGWLRSKWGS 731
>UniRef50_UPI0000D8E35E Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 663
Score = 34.7 bits (76), Expect = 1.9
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +3
Query: 372 QSSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWSRTGRPGTCRSWTRT 551
Q P + PY G HS + R CH L +G+ RRW RTG+P + T
Sbjct: 509 QPGPSHYQSPYSGE---NPPHSHMNRCRVCHNLFTYNQGS--RRWDRTGQPSSTE--RNT 561
Query: 552 RWSAGSA 572
W S+
Sbjct: 562 PWQPSSS 568
>UniRef50_UPI000069F76B Cluster: UPI000069F76B related cluster; n=2;
Xenopus tropicalis|Rep: UPI000069F76B UniRef100 entry -
Xenopus tropicalis
Length = 588
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 465 CLGEAGRGACRRRWSRTGRPGTCRSWTRTRWSA 563
C GE G G CR +W G +W RW A
Sbjct: 347 CSGEQGAGGCRGKWGSREMEGAVGNWGAGRWRA 379
>UniRef50_Q6ENY6 Cluster: Putative uncharacterized protein
P0603H10.45; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0603H10.45 - Oryza sativa subsp. japonica (Rice)
Length = 233
Score = 34.7 bits (76), Expect = 1.9
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Frame = +3
Query: 351 QKHALHCQSSPCGRRPPYRGA--------CRAGCSHSRLKRTSKCHCLGEAGRGACRRRW 506
++HA+H Q P PP GA CR C R+ R K G G RRRW
Sbjct: 126 RRHAIHLQPPP-PLPPPPEGAFAAGSARRCRRHCHRRRIHRRRKVR-----GGGGSRRRW 179
Query: 507 SRTGRPGTCRSWTRTRWSAGSA 572
+R P + T AGSA
Sbjct: 180 TRLPPPDLPAAATDAATVAGSA 201
>UniRef50_Q7R3Z4 Cluster: GLP_68_37985_35016; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_68_37985_35016 - Giardia lamblia ATCC
50803
Length = 989
Score = 34.7 bits (76), Expect = 1.9
Identities = 22/53 (41%), Positives = 26/53 (49%)
Frame = -1
Query: 426 IQPGMPPGMGASCHTESSDSVVHAFACSLAYVCETQDVTTACGTGCSTNSKRI 268
IQPG P G SC S FAC LAY C+T + AC G S S ++
Sbjct: 858 IQPGPLPNNG-SCKHASHSYRWFRFACGLAYPCDTCH-SKACACGNSVASMQV 908
>UniRef50_UPI0000E80C91 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 291
Score = 34.3 bits (75), Expect = 2.6
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +3
Query: 339 PKNKQKHALHCQSSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWSRTG 518
P+ +++ AL C+ P RP RG S R +C L + + ACRR + ++G
Sbjct: 78 PRCRRRGALRCRPQPSRSRPGARGLPGRRSSDRR-----RCFVLLLSRKHACRRSYEKSG 132
Query: 519 RPGT 530
R G+
Sbjct: 133 RAGS 136
>UniRef50_Q4SRQ3 Cluster: Chromosome undetermined SCAF14504, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14504,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1719
Score = 34.3 bits (75), Expect = 2.6
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Frame = +3
Query: 405 RGACRAGCSHSRLKRTSKCHCLGEAGRGAC----RRRWS---RTGRPGTCRSWTRTRWSA 563
R A +GC + +RT G R C + W+ T RP TC S RW A
Sbjct: 74 RAATTSGCQSTTTRRTHAPSSAGPGTRAWCWSWPPKSWTGRAATARPWTCASAAPARWDA 133
Query: 564 GSA 572
G+A
Sbjct: 134 GAA 136
>UniRef50_Q657A3 Cluster: Putative uncharacterized protein
P0022F12.35; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0022F12.35 - Oryza sativa subsp. japonica (Rice)
Length = 144
Score = 34.3 bits (75), Expect = 2.6
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 196 DSLQLPHYMSRCISRITRASTSLRNPLAVR*AASPTGSCHILGLANICQRTSKSMHYTVR 375
DSL +PHY+ C+SR + R+ + A SPT S L + + H +
Sbjct: 44 DSLTMPHYVLHCLSRCQSLGSWTRSEDQILSARSPTESSSTLPMVGDHPSPVNTTHQLLH 103
Query: 376 ALRVAG--GPHT 405
+ + GPH+
Sbjct: 104 LVSIVAFFGPHS 115
>UniRef50_Q5K741 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 34.3 bits (75), Expect = 2.6
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 9/131 (6%)
Frame = +2
Query: 230 VYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPG 409
+YR LP + R ++ L+ P+ + V + Q + C + ++ ++ P
Sbjct: 38 LYRLLPPVCRQIILHALWSHHPL-RTVDVKLLLQMDVHAPLEECDEVMRPAIDRKVLHPM 96
Query: 410 GMPG----WMLAQSFKKNLKVSLLGGGRAWSMSSSLEPDGKARDVSF-----LDAYALER 562
W L SFKK L+ +L G G + S E +A D+ L AY +
Sbjct: 97 HYKKQRMQWSLNDSFKKGLRNALTGLGTSNSFGVPFERH-QATDLDLPSEDELVAYGEDT 155
Query: 563 WECVLHYMVGS 595
+E +L YMV S
Sbjct: 156 FESILKYMVSS 166
>UniRef50_Q5P3Z8 Cluster: Putative uncharacterized protein; n=1;
Azoarcus sp. EbN1|Rep: Putative uncharacterized protein
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 383
Score = 29.5 bits (63), Expect(2) = 3.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 499 RRHAPRPASPKQ*HFEVLFKRLCEHPARHAPRYGGLL 389
RR PRP SP+ E +F+ + HAPR+ G +
Sbjct: 156 RRFNPRPPSPRGDAIECVFRYRTRTVSIHAPRHRGAM 192
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 415 HAPRYGGLLPHGE 377
HAPR+ G +PH +
Sbjct: 232 HAPRHRGAMPHDQ 244
>UniRef50_Q0FWR4 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
protein - Roseovarius sp. HTCC2601
Length = 78
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +3
Query: 375 SSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWSRTGRPGTCRS--WTR 548
+S C RP A C +R RTS C GA R SR R + RS WTR
Sbjct: 19 ASTCASRPVSCSRNTASCGAARSCRTSSTGCSALRAAGAPSRTASRPSRGASARSRRWTR 78
>UniRef50_Q67VH2 Cluster: Putative uncharacterized protein
OSJNBa0001B11.21; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0001B11.21 - Oryza sativa subsp. japonica (Rice)
Length = 303
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 381 PCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRRR 503
PCG+RP ACR + + +++CH E GR ACR R
Sbjct: 243 PCGQRP---NACRT--RQTTVMPSAECHPAEEGGRRACRHR 278
>UniRef50_Q0SG89 Cluster: Possible transcriptional regulator; n=1;
Rhodococcus sp. RHA1|Rep: Possible transcriptional
regulator - Rhodococcus sp. (strain RHA1)
Length = 503
Score = 33.1 bits (72), Expect = 5.9
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 254 ARHFVIRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMP 418
AR F + LL VP +T W+ A+E+ +A ELS A G P
Sbjct: 99 AREFGVPLLIAPDSVPFIAITKWIFSRIAEEEKRALEDAIELSYQLTAVAAGPSP 153
>UniRef50_Q5KF22 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1389
Score = 33.1 bits (72), Expect = 5.9
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 318 PGSRKHMPKNKQKHALHCQSSPCGRRPPYRGACRAGCSHSRLKRTSKCH-CLGEAGRGAC 494
P +R H P NK++H + P +P + G CR C + R H G+G+C
Sbjct: 179 PPARTHTPGNKRQHTDKRRCVPVWNQPGH-GYCREKCMENGRIRIEIGHDDRVPDGQGSC 237
Query: 495 RRRWSRTGRPGTC 533
RR S + +C
Sbjct: 238 RRTKSSSPSSRSC 250
>UniRef50_Q8A1J0 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Bacteroides
thetaiotaomicron|Rep: Putative outer membrane protein,
probably involved in nutrient binding - Bacteroides
thetaiotaomicron
Length = 691
Score = 32.7 bits (71), Expect = 7.8
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 399 PYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWSRT--GRPGTCRSWTRTRWSAGSA 572
P RGA A + RL++ S + G+A R A W RT G +++ TRW+ +A
Sbjct: 224 PSRGAAFALIARLRLQQASPLYNGGQAARTAF-GNWKRTVDGANYVNQNYDETRWAVAAA 282
Query: 573 CC 578
C
Sbjct: 283 AC 284
>UniRef50_Q5GWM6 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 458
Score = 32.7 bits (71), Expect = 7.8
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 369 CQSSPCGRRPPY-RGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWSRTGRPG 527
C+S C PP+ R A L+R + H L GRG C R R R G
Sbjct: 294 CRSDVCVPSPPHQRRRGHASGGSQGLERVGRRHQLSARGRGLCHRARGRAFRSG 347
>UniRef50_Q3JNQ9 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 544
Score = 32.7 bits (71), Expect = 7.8
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 324 SRKHMPKNKQKHALH-CQSSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRR 500
+ + P+ + +L C++ P GR PP RA S RT L A R CR
Sbjct: 465 ANRRSPRRRSSRSLRACRARPPGRMPPRTARARAARCSSPRSRTRLPSRLSRAARCRCRG 524
Query: 501 R 503
R
Sbjct: 525 R 525
>UniRef50_A5NQR2 Cluster: Transposase, IS4 family protein; n=4;
Methylobacterium sp. 4-46|Rep: Transposase, IS4 family
protein - Methylobacterium sp. 4-46
Length = 271
Score = 32.7 bits (71), Expect = 7.8
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Frame = +3
Query: 324 SRKHMPKNKQKHALHCQSSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGRGAC--- 494
+R P+ K + C S C R P R RA + S G C
Sbjct: 17 ARAGRPRITGKSSTACCGS-CARARPGRICRRATALSEPYRAGSMAGARRACSTGCCSAC 75
Query: 495 -RRRWSRTGRPGTCRSWTRTRWSA 563
RRR GTC SWTR RW A
Sbjct: 76 RRRRMLAATSTGTCTSWTR-RWCA 98
>UniRef50_A0TK10 Cluster: Putative uncharacterized protein; n=1;
Burkholderia ambifaria MC40-6|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 206
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 405 RGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWSRTG 518
RGACRAG +R+ R ++ + AGRG RRR + G
Sbjct: 22 RGACRAGRRAARVLRRARRGGVSGAGRGGKRRRSAARG 59
>UniRef50_Q54C29 Cluster: General transcription factor IIH,
polypeptide 4; n=1; Dictyostelium discoideum AX4|Rep:
General transcription factor IIH, polypeptide 4 -
Dictyostelium discoideum AX4
Length = 483
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 440 FKKNLKVSLLGGGRA-WSMSSSLEPDGKARDVSFLDAYALERWECVLHYM 586
F+ N+K SL+ + +S +SS++ + K + LD+Y+ +WE VL+++
Sbjct: 127 FQDNIKRSLVQVNQVIFSNNSSIKDNHKPPSIDDLDSYSKSQWEKVLYFL 176
>UniRef50_A7ARI7 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 586
Score = 32.7 bits (71), Expect = 7.8
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 227 AVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTL 370
A++R L EL + ++RL+ + Q VP+ + W++ T + +A + L
Sbjct: 29 AIFRSLGELEQLIILRLVNINQAVPERALRLWMNPTSFTDFRRALSLL 76
>UniRef50_Q2H8P1 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 179
Score = 32.7 bits (71), Expect = 7.8
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 594 LPTM*CSTHSQRSSAYASRNDTS-RAFPSGSSDDDMLHALPPPSNDTLRFFLNDCASIQ 421
L M ST SQR + SRND R FP+ S+ LPP S + R L+ SI+
Sbjct: 108 LAWMQSSTQSQRLPTHQSRNDKPVRPFPAPSAASASRKVLPPKSVASTRVTLSWSTSIE 166
>UniRef50_Q86UN2 Cluster: Reticulon-4 receptor-like 1 precursor;
n=23; Euteleostomi|Rep: Reticulon-4 receptor-like 1
precursor - Homo sapiens (Human)
Length = 441
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -3
Query: 604 GLRAAHHVVQHALPALQRVRVQERHVPGLPVRLQRRRHAPRPASPK 467
G + H + H L R +E H P P R + H PRP K
Sbjct: 306 GPASPHQIKSHTLTTTDRAARKEHHSPHGPTRSKGHPHGPRPGHRK 351
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,597,836
Number of Sequences: 1657284
Number of extensions: 13034472
Number of successful extensions: 46004
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 43629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45946
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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