Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_K09
(645 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8123| Best HMM Match : Tfb2 (HMM E-Value=0.00019) 34 0.11
SB_38878| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8) 30 1.9
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 29 3.2
SB_9920| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_57156| Best HMM Match : DUF1456 (HMM E-Value=4.9) 29 4.3
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 28 7.5
SB_57582| Best HMM Match : efhand (HMM E-Value=3.8e-05) 27 9.9
SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28) 27 9.9
SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_8123| Best HMM Match : Tfb2 (HMM E-Value=0.00019)
Length = 448
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 140 LQCKDLHEYLKSRSPQFLETLYNYPTICLAVYR 238
LQ KDL+EYL L+ L+ +P CL V+R
Sbjct: 17 LQRKDLYEYLSGLPVGILDRLFCHPATCLTVFR 49
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 365 TLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGG 475
TL +L +W+E P G + + +F+ N+K +L GG
Sbjct: 57 TLKQLRIWREVP-SGVHKRYEMNATFRTNMKAALCGG 92
>SB_38878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 31.1 bits (67), Expect = 0.80
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 191 LETLYN-YPTICLAVYRELPELARHFVIRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTT 367
L TL+N Y + + L R + ++ V P VV SWVS KEQA A T
Sbjct: 192 LSTLHNEYVVGNWSGIKALFTFERMYSYFVIHVYGPCALIVVVSWVSFLLPKEQAPARIT 251
Query: 368 LSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLG 472
L SV I + M ++ K + L+G
Sbjct: 252 LGVTSVLTVVTILNMLNNSMPKVNYVKTIDKYLIG 286
>SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8)
Length = 551
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 327 RKHMPKNKQKHALHCQSSPCGRRPPYRGACRAGCSH-SRLKRTSKCHCLGE 476
R H+P+ +H LH PC RP +H +R T +C LG+
Sbjct: 157 RPHLPRTPCEHRLHLARIPCEHRPHLAKTPWEHRTHLARTSNTYQCLDLGD 207
>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
Length = 1086
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 570 HSQRSSAYA-SRNDTSRAFPSGSSDDDMLHALPPPSNDTLRFFLNDCASIQ 421
HSQR+ A S+N+T + PSG+ L A P +D ND +S++
Sbjct: 547 HSQRTDNQALSQNNTDQTTPSGTFTPSKLKAASKPVSDRGLAGQNDGSSVR 597
>SB_9920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 29.1 bits (62), Expect = 3.2
Identities = 26/104 (25%), Positives = 41/104 (39%)
Frame = +2
Query: 296 VPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGG 475
VP W + E A ++L + E +PG A+ K + S++
Sbjct: 53 VPDCYAWHWRQTASSAEGAAVMSSLGNQIILTEEDVPG-------AKLLKPAVDCSVIEL 105
Query: 476 GRAWSMSSSLEPDGKARDVSFLDAYALERWECVLHYMVGSAQTE 607
R W + GK RD+ D A+ + + HY+V S Q E
Sbjct: 106 KR-WLECHGEKRTGKKRDLIQRDIPAMYNYGHLYHYLVESLQNE 148
>SB_57156| Best HMM Match : DUF1456 (HMM E-Value=4.9)
Length = 501
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 603 VCALPTM*CSTHSQRSSAYASRNDTSRAFPSGSSDDDMLHALPPPSNDTL 454
+ +LP S S+++ S + SR F SG SD D H + P S+ L
Sbjct: 188 ISSLPLSGTSRSGLSSASFQSSDKPSRPF-SGKSDSDTSHFMAPSSSACL 236
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 324 SRKHMPKNKQKHALHCQSSPCGRRPPYRGACRAGCSHSRLKRTSKCHCLGEAGR 485
SR H KN+ + C+ CGR YRG SH R+ K + GR
Sbjct: 134 SRAHTGKNRTYPSKPCKCKECGRSFRYRGHL---SSHQRIHSGEKPYECDICGR 184
>SB_57582| Best HMM Match : efhand (HMM E-Value=3.8e-05)
Length = 520
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -3
Query: 541 QERHVPGLPVRLQRRRHAPRPASPKQ*HFEVLFKRLCEHPARHAPRYGGL 392
Q P P QR R RPAS Q ++ R PAR A + G+
Sbjct: 307 QRPRSPNRPSSPQRPRSPNRPASTSQSPSSIMLDRPDSSPARPASQMSGV 356
>SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28)
Length = 1006
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 573 THSQRSSAYASRNDTSRAFPSGSSDDDMLHALPPPS 466
T + S+Y SRND +FPS + D H P+
Sbjct: 466 TDNDTKSSYPSRNDPRDSFPSRNHSMDPYHHTNEPT 501
>SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 176 RSPQFLETLYNYPTICLAVYRELP 247
R+P +ETLYN P CL Y E P
Sbjct: 48 RTPVLIETLYNLPVRCL--YSEPP 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,580,322
Number of Sequences: 59808
Number of extensions: 440602
Number of successful extensions: 1308
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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