Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_K06
(637 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.18
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 28 1.3
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 28 1.3
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 2.3
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 27 3.0
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 4.0
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 4.0
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 6.9
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 25 6.9
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 6.9
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 9.1
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 25 9.1
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 9.1
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 30.7 bits (66), Expect = 0.18
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 410 NATALREKLQAAVQNTVQESHXLAXKVSSNVQXTNXKLAPKIXAAYDD 553
N ++LRE L VQ V+E H + NV+ T ++ +I A DD
Sbjct: 751 NVSSLREDL--GVQINVEEGHIRIQGIKKNVEETAARIKSQIEALIDD 796
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +2
Query: 323 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKVSSNV 502
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E K+S N+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKEE-----KISRNL 185
Query: 503 QXTNXKLAP 529
+ ++ ++P
Sbjct: 186 RSSSRSISP 194
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 305 LGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAAVQNTVQESHX 475
+ +A KA+++LEQ+ + E L K H + E+ + +EKL A ++ + S
Sbjct: 52 INEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEE 111
Query: 476 L 478
L
Sbjct: 112 L 112
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 326 AKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 430
A E +++ +IER+A K A + E+ ATALRE
Sbjct: 157 ASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 293 SXAALGDANGKAKEALEQSRQNIERTAEE 379
S A G NG+AKE E+ R ++T E+
Sbjct: 468 SSAKQGKGNGRAKETPEEKRARKKKTKED 496
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 4.0
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Frame = +2
Query: 323 KAKEALEQSRQNIERTAEELRKAHPDV---EKNATALREKLQ--AAVQNTVQESHXLAXK 487
K +E ++ +NI+ E+LRK+ + + A LRE + T++
Sbjct: 679 KKQEDVDSLEKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLKGKHETLEAQRNDLHS 738
Query: 488 VSSNVQXTNXKLAPKIXAAYDDFAXNTQEVIKKIQEAANAKQ-*ASILNSH 637
S+ + TN L+ ++ + +D T V Q++ KQ S++NS+
Sbjct: 739 SLSDAKNTNAILSSELTKSSEDVKRLTANVETLTQDSKAMKQSFTSLVNSY 789
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 338 LEQSRQNIERTAEELRKAHPDVEK 409
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.4 bits (53), Expect = 6.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 380 LRKAHPDVEKNATALREKLQAAVQNTVQE 466
L AH D+E T++RE+L++ + +E
Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 6.9
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Frame = +2
Query: 305 LGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAAVQNTVQES 469
L + N + KE +E + RT +E EKN LRE+L+ A + + +
Sbjct: 525 LTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA-RMKLADK 583
Query: 470 HXLAXKVSSNVQXTNXKL 523
+ S N+ L
Sbjct: 584 YPQGDNTSENIDWLKHSL 601
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 25.4 bits (53), Expect = 6.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 317 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 412
N K KE E++ + EELR+A PD E++
Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 432 FSRRAVAFFSTSGWALRSSSAVRSMF 355
FSR V FFS AL+S S + +MF
Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 9.1
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +2
Query: 323 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKVS 493
K KE +E Q ++ +ER E LRK + EK A + ++S K+
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 494 SNVQXTNXKLAPKI 535
+++ N K+
Sbjct: 188 KDMEQENASTIQKL 201
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 311 DANGKAKEALEQSRQNIERTAEE 379
D+ KAK LEQ+R +ERT E
Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,711,887
Number of Sequences: 5004
Number of extensions: 25542
Number of successful extensions: 109
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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