Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_K06
(637 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 33 0.14
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 32 0.44
04_01_0180 + 2034021-2034023,2034741-2035088 31 1.0
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 30 1.8
05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824 29 3.1
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401 28 5.4
02_05_0939 + 32914936-32915055,32916674-32916823,32917160-329173... 28 5.4
11_04_0218 + 14983132-14984658,14984762-14984869,14984964-149851... 28 7.1
03_05_0373 + 23581812-23583293 28 7.1
02_04_0315 - 21969416-21970756 28 7.1
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 27 9.4
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 299 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXL 478
AA+ DA G+ ++A+E ++ E+L A+PDVE L E L+ A ++ ++ L
Sbjct: 514 AAIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSL 573
Query: 479 AXKVSSNVQ 505
+N Q
Sbjct: 574 ENLFVTNSQ 582
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 31.9 bits (69), Expect = 0.44
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +2
Query: 311 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKV 490
DA G+ EA+E + E+L A+PDV+ L E L+ A + +++ L
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSL---- 692
Query: 491 SSNVQXTNXKLAPKIXAAYD 550
N+ TN K A YD
Sbjct: 693 -ENLLETNPYTVTKRVAKYD 711
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +2
Query: 332 EALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQN 454
EALE+ QN+ R EE +K H +++K L K L AA +N
Sbjct: 52 EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 329 KEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESHXLAXKVSSNVQ 505
K+ +QS ERT E + KAH ++ K E +QAA +QE VQ
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQEEQFPMSLADQKVQ 475
Query: 506 XT 511
T
Sbjct: 476 AT 477
>05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824
Length = 200
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/100 (23%), Positives = 38/100 (38%)
Frame = +2
Query: 308 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXK 487
G G +K+ +++ +R +E A + A +EK QAA + + + K
Sbjct: 24 GQVMGASKDKASEAK---DRASEAAGHAAGKGQDTKEATKEKAQAAKERASETAQAAKDK 80
Query: 488 VSSNVQXTNXKLAPKIXAAYDDFAXNTQEVIKKIQEAANA 607
SS Q K A T++ +K E A A
Sbjct: 81 TSSTSQAARDKAAESKDQTGGFLGEKTEQAKQKAAETAGA 120
>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
Length = 500
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 308 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 439
GD G+ + A+ +R E A LR+A ++ A ALR +++
Sbjct: 47 GDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90
>02_05_0939 + 32914936-32915055,32916674-32916823,32917160-32917305,
32917396-32917552,32917695-32917753,32918180-32918291,
32918901-32919050,32919180-32919316,32919977-32920123,
32920197-32920298,32920674-32920731,32920840-32920941,
32921905-32921942,32922031-32922157,32922228-32922401,
32922542-32922628,32923838-32923947,32924654-32924714,
32925338-32925515,32925628-32925833,32926108-32926227,
32927202-32927423,32927708-32927847,32927976-32928087,
32928254-32928304,32928384-32928473,32928630-32928800,
32928897-32929049,32929860-32930036,32930131-32930268,
32930363-32930433,32930837-32930936,32931156-32931212,
32931301-32931357,32931451-32931531,32931614-32931696,
32931831-32931966
Length = 1459
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +2
Query: 305 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALRE---KLQAAVQNTVQESHX 475
L ++ K +LE + + +++ K DVE L++ KLQ + N E+H
Sbjct: 923 LVESLSKRNSSLEYELTSARKGSDDTMKKLKDVEGKCNHLQQNLDKLQEKLTNLENENHV 982
Query: 476 LAXKVSSNVQXTNXKLAPK 532
L K + N +A K
Sbjct: 983 LRQKALNMSPLNNMSMATK 1001
>11_04_0218 +
14983132-14984658,14984762-14984869,14984964-14985125,
14985270-14985275
Length = 600
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 62 QVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSARLG 241
+ ++LRLHR+G R + +R L H+ + S + L +L+ + HR + R G
Sbjct: 13 EAEAALRLHRNGRRDEALSRAMDLAIQHK---RSSPLAL---NLSGDLNMAAHRRNRRRG 66
Query: 242 RTA 250
R A
Sbjct: 67 RGA 69
>03_05_0373 + 23581812-23583293
Length = 493
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 365 ARCSASTVPKPPW 327
+RCSAST PK PW
Sbjct: 66 SRCSASTPPKSPW 78
>02_04_0315 - 21969416-21970756
Length = 446
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 311 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXL 478
D NG + ALE++ + + E L A + K A+ EK ++A++ QE+ L
Sbjct: 246 DENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ESAMEALRQENESL 300
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 323 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXL 478
KA LE+ ++E E A+ ++++ L+EK + V+N + H L
Sbjct: 391 KANGNLEKQLLSLEEKYENATHANGELKEELLFLKEKFVSVVENNTRLEHQL 442
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,607,305
Number of Sequences: 37544
Number of extensions: 208234
Number of successful extensions: 934
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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