Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_K06
(637 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g38040.2 68415.m04670 acetyl co-enzyme A carboxylase carboxyl... 36 0.017
At2g38040.1 68415.m04669 acetyl co-enzyme A carboxylase carboxyl... 36 0.017
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 32 0.37
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 31 0.64
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 31 0.64
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 30 1.1
At5g54670.1 68418.m06807 kinesin-like protein C (KATC) 30 1.5
At3g24010.1 68416.m03016 PHD finger family protein contains Pfam... 29 2.6
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 28 4.5
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 28 4.5
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 28 6.0
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 28 6.0
At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacu... 28 6.0
At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacu... 28 6.0
At5g06160.1 68418.m00687 splicing factor-related contains some s... 28 6.0
At4g18780.1 68417.m02774 cellulose synthase, catalytic subunit (... 28 6.0
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 27 7.9
At4g27595.1 68417.m03964 protein transport protein-related low s... 27 7.9
At2g43040.1 68415.m05341 calmodulin-binding protein similar to p... 27 7.9
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 27 7.9
>At2g38040.2 68415.m04670 acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit family contains Pfam
profile: PF03255: Acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit
Length = 769
Score = 36.3 bits (80), Expect = 0.017
Identities = 19/89 (21%), Positives = 42/89 (47%)
Frame = +2
Query: 338 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKVSSNVQXTNX 517
L+ +QN + TAE++ A+ ++++ L +++ + ++ V+ + V+
Sbjct: 627 LDAVKQNQKDTAEQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKA 686
Query: 518 KLAPKIXAAYDDFAXNTQEVIKKIQEAAN 604
P + AY Q++ +KI EA N
Sbjct: 687 SKTPGVTEAYQKIEALEQQIKQKIAEALN 715
>At2g38040.1 68415.m04669 acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit family contains Pfam
profile: PF03255: Acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit
Length = 769
Score = 36.3 bits (80), Expect = 0.017
Identities = 19/89 (21%), Positives = 42/89 (47%)
Frame = +2
Query: 338 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKVSSNVQXTNX 517
L+ +QN + TAE++ A+ ++++ L +++ + ++ V+ + V+
Sbjct: 627 LDAVKQNQKDTAEQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKA 686
Query: 518 KLAPKIXAAYDDFAXNTQEVIKKIQEAAN 604
P + AY Q++ +KI EA N
Sbjct: 687 SKTPGVTEAYQKIEALEQQIKQKIAEALN 715
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +2
Query: 311 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKV 490
+A GKA E + +++N+E+ E R+ ++ L+E+ A Q Q++
Sbjct: 284 EAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTRESTESG 343
Query: 491 SSNVQXTNXKLA 526
+ + T A
Sbjct: 344 AQKAEETKDSAA 355
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 31.1 bits (67), Expect = 0.64
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +2
Query: 323 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKVSSNV 502
KA + + +IE EELR HPD + N L+ K+ V+ +Q S +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 503 QXTNXKLAPK 532
+ L PK
Sbjct: 246 EFNQEPLLPK 255
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 31.1 bits (67), Expect = 0.64
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +2
Query: 323 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKVSSNV 502
KA + + +IE EELR HPD + N L+ K+ V+ +Q S +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 503 QXTNXKLAPK 532
+ L PK
Sbjct: 246 EFNQEPLLPK 255
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 1/100 (1%)
Frame = +2
Query: 308 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESHXLAX 484
G+ GKA+E Q+ + AEE R K + E Q+A T Q +
Sbjct: 11 GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70
Query: 485 KVSSNVQXTNXKLAPKIXAAYDDFAXNTQEVIKKIQEAAN 604
K Q K + A TQ +K +A +
Sbjct: 71 KAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEKTSQAGD 110
>At5g54670.1 68418.m06807 kinesin-like protein C (KATC)
Length = 754
Score = 29.9 bits (64), Expect = 1.5
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +2
Query: 302 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLA 481
A D+ GK KEA + EEL KA D++ TA +++Q +V + + L
Sbjct: 151 AANDSLGKEKEARLSVEKAQAGLTEELGKAQGDLQ---TA-NQRIQ-----SVNDMYKLL 201
Query: 482 XKVSSNVQXTNXKLAPKIXAAYDDFAXNTQEVIKKIQEAANAK 610
+ +S++Q N KL + A++ +E I+ N K
Sbjct: 202 QEYNSSLQLYNSKLQGDLDEAHETIKRGEKERTAIIENIGNLK 244
>At3g24010.1 68416.m03016 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 234
Score = 29.1 bits (62), Expect = 2.6
Identities = 25/103 (24%), Positives = 43/103 (41%)
Frame = +2
Query: 299 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXL 478
A L D + +E Q+ Q E+ E++R+ T+L + + A+
Sbjct: 23 ALLRDLDKSLQENQRQNEQRCEKEIEDIRRGRAGNITPNTSLTKFSEEALDEQKHSVRIA 82
Query: 479 AXKVSSNVQXTNXKLAPKIXAAYDDFAXNTQEVIKKIQEAANA 607
KV+ +Q + L D + + EVI+K +EAA A
Sbjct: 83 DEKVTLAMQAYD--LVDMHVQQLDQYMKKSDEVIRKEKEAAAA 123
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 341 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKVSSNVQ 505
+++ + + AEEL+ D++ EKL Q E+ +A KVSS+V+
Sbjct: 66 QKTVKEFKERAEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSVK 120
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/101 (19%), Positives = 42/101 (41%)
Frame = +2
Query: 335 ALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKVSSNVQXTN 514
ALE ++ E + D+ K T+ EKLQ+ + + +E++ + S +
Sbjct: 476 ALEAEKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQ 535
Query: 515 XKLAPKIXAAYDDFAXNTQEVIKKIQEAANAKQ*ASILNSH 637
+A K+ + ++ +I++ S+L SH
Sbjct: 536 SVIA-KLEEQLTVESSKADTLVSEIEKLRAVAAEKSVLESH 575
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 1060
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 353 QNIERTAEELRKAHPDVEKNATALREKLQAA---VQNTVQE 466
+++E+ +E RKAH + A AL +LQAA V N QE
Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQE 916
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 332 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 463
EAL+ S Q + AE LRKA + E + L +L+ A + Q
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQ 1040
>At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 26 SALSLSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSP 205
+A + ++A + + R+ +++ RS PR DG RRS L +R+P +++ + LT +P
Sbjct: 88 AAAASASAPYEVESRTVVKVARSEPR-DGE-RRSPLPLVYRSPSLPTTVSSSDPHLTHAP 145
Query: 206 SQRTHRTSARLGR 244
R A+ GR
Sbjct: 146 VPMEPRDGAKDGR 158
>At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 26 SALSLSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSP 205
+A + ++A + + R+ +++ RS PR DG RRS L +R+P +++ + LT +P
Sbjct: 88 AAAASASAPYEVESRTVVKVARSEPR-DGE-RRSPLPLVYRSPSLPTTVSSSDPHLTHAP 145
Query: 206 SQRTHRTSARLGR 244
R A+ GR
Sbjct: 146 VPMEPRDGAKDGR 158
>At5g06160.1 68418.m00687 splicing factor-related contains some
similarity to splicing factor SP:Q12874 from [Homo
sapiens]
Length = 504
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 20 ISSALSLSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTR 199
+SS L T + +V RL + + + + RL+QGHR H SI L L
Sbjct: 1 MSSTLLEQTRSNHEEVERLERLVVEDLQKEPPSSKDRLVQGHRVRHMIESIMLTTEKLVE 60
Query: 200 S 202
+
Sbjct: 61 T 61
>At4g18780.1 68417.m02774 cellulose synthase, catalytic subunit
(IRX1) nearly identical to gi:12836997
Length = 985
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 246 VLPSLAEVLCVL*LGERVKLLF*SLMELPWCGV 148
++P+L+ + +L LG + ++ S++EL W GV
Sbjct: 787 IIPTLSNLASMLFLGLFISIILTSVLELRWSGV 819
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 347 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLAXKVSSN 499
S N+ RT ++ HP+ + + +RE + + ++E+ L V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 27.5 bits (58), Expect = 7.9
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 311 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHXLA 481
D K KE+L E QNI + AEELR D K E+L AA ++ V++ L
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702
Query: 482 XKVSSNVQXTNXKLA 526
V + +LA
Sbjct: 703 STVQEAEELRRRELA 717
>At2g43040.1 68415.m05341 calmodulin-binding protein similar to
pollen-specific calmodulin-binding protein MPCBP
GI:10086260 from [Zea mays]; contains Pfam profile
PF00515: TPR Domain
Length = 704
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +3
Query: 198 AHQVKGRTGLQQG-LEGRLRV-----RAATAQRLRQESPXQRSETRTARPR 332
A + GR Q+G LEG LRV A QRL+ P ++ T+ RPR
Sbjct: 60 ARALLGRLEYQRGNLEGALRVFEGIDLQAAIQRLQVSVPLEKPATKKNRPR 110
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 299 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 433
AAL + + +AL + ER AEE R AH + K A RE+
Sbjct: 370 AALNEGKLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,534,103
Number of Sequences: 28952
Number of extensions: 151048
Number of successful extensions: 679
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -