Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_K05
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 136 2e-32
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 136 2e-32
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 116 1e-26
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 116 1e-26
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 101 6e-22
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 101 6e-22
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 101 6e-22
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 79 4e-15
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 79 4e-15
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 65 5e-11
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 65 5e-11
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 65 5e-11
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 60 2e-09
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 56 2e-08
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 56 3e-08
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 56 3e-08
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 55 5e-08
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 54 7e-08
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 54 9e-08
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 54 9e-08
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 54 9e-08
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 54 9e-08
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 54 9e-08
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 52 5e-07
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 52 5e-07
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 52 5e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 52 5e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 52 5e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 52 5e-07
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 50 1e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 50 1e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 50 1e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 50 1e-06
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 50 1e-06
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 50 1e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 50 1e-06
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 48 6e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 48 8e-06
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 48 8e-06
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 47 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 5e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 7e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 1e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 1e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 2e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 2e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 43 2e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 43 2e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 42 5e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 9e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 40 0.002
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 40 0.002
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 40 0.002
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 40 0.002
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 38 0.008
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 37 0.011
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 37 0.014
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 37 0.014
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.019
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 36 0.025
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.025
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 36 0.033
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.033
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 36 0.033
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 36 0.033
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 36 0.033
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 35 0.044
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 35 0.044
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 31 0.54
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.54
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 0.54
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.54
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 2.2
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 29 2.2
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 2.9
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 28 6.6
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 28 6.6
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF101318-12|AAC69350.2| 400|Caenorhabditis elegans Hypothetical... 27 8.7
AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine re... 27 8.7
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical ... 27 8.7
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 136 bits (328), Expect = 2e-32
Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 1/178 (0%)
Frame = +3
Query: 117 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI 296
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 297 NVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARHG-KIFVGGLX 473
VK D GRSRGFAF+ F E +AA E TI V AK+R K+FVGGL
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118
Query: 474 XEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKTPKRTIG 647
+ S+ ++ + F +FG + +E PFDK R+ F FI FE E+ + K+T G
Sbjct: 119 SDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFG 176
Score = 57.6 bits (133), Expect = 7e-09
Identities = 31/88 (35%), Positives = 47/88 (53%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
+++K+FVGGL + ++++LR HF +G++ I D T R FAFIVF+ ES K
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 381 MAAGEHTINNXKVXPXKAKARHGKIFVG 464
+ + T + KA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 54.4 bits (125), Expect = 7e-08
Identities = 20/67 (29%), Positives = 43/67 (64%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKT 629
KIFVGG+ E++++++ + F+++G + Q ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 630 PKRTIGG 650
++TI G
Sbjct: 90 REQTIKG 96
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 136 bits (328), Expect = 2e-32
Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 1/178 (0%)
Frame = +3
Query: 117 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI 296
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 297 NVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARHG-KIFVGGLX 473
VK D GRSRGFAF+ F E +AA E TI V AK+R K+FVGGL
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118
Query: 474 XEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKTPKRTIG 647
+ S+ ++ + F +FG + +E PFDK R+ F FI FE E+ + K+T G
Sbjct: 119 SDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFG 176
Score = 57.6 bits (133), Expect = 7e-09
Identities = 31/88 (35%), Positives = 47/88 (53%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
+++K+FVGGL + ++++LR HF +G++ I D T R FAFIVF+ ES K
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 381 MAAGEHTINNXKVXPXKAKARHGKIFVG 464
+ + T + KA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 54.4 bits (125), Expect = 7e-08
Identities = 20/67 (29%), Positives = 43/67 (64%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKT 629
KIFVGG+ E++++++ + F+++G + Q ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 630 PKRTIGG 650
++TI G
Sbjct: 90 REQTIKG 96
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 116 bits (280), Expect = 1e-26
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 9/162 (5%)
Frame = +3
Query: 192 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESI 371
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 372 XKVMAAGEHTINNXKVXP---------XKAKARHGKIFVGGLXXEISDDEIXNFFSEFGT 524
KV+ EH ++ K+ P K + K+F+GGL + +++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 525 ILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKTPKRTIGG 650
+ + FDK + +GF F+TF+S++ + + + I G
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEING 201
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMA 386
+K+F+GGLS +T ++++ +F YG++ + D T R RGF F+ F + E KV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 387 AGEHTINNXKVXPXKAKAR 443
H IN V KA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 116 bits (280), Expect = 1e-26
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 9/162 (5%)
Frame = +3
Query: 192 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESI 371
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 372 XKVMAAGEHTINNXKVXP---------XKAKARHGKIFVGGLXXEISDDEIXNFFSEFGT 524
KV+ EH ++ K+ P K + K+F+GGL + +++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 525 ILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKTPKRTIGG 650
+ + FDK + +GF F+TF+S++ + + + I G
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEING 201
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMA 386
+K+F+GGLS +T ++++ +F YG++ + D T R RGF F+ F + E KV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 387 AGEHTINNXKVXPXKAKAR 443
H IN V KA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 101 bits (241), Expect = 6e-22
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Frame = +3
Query: 141 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNT 320
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 321 GRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARHGK-----------IFVGG 467
RSRGF F+ F + M H I+ V P +A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 468 LXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKTPKRTIG 647
+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ + +
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVN 180
Query: 648 G 650
G
Sbjct: 181 G 181
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMA 386
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+ + +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 387 AGEHTINNXKVXPXKAKAR 443
H +N + K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 101 bits (241), Expect = 6e-22
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Frame = +3
Query: 141 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNT 320
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 321 GRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARHGK-----------IFVGG 467
RSRGF F+ F + M H I+ V P +A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 468 LXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKTPKRTIG 647
+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ + +
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVN 180
Query: 648 G 650
G
Sbjct: 181 G 181
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMA 386
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+ + +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 387 AGEHTINNXKVXPXKAKAR 443
H +N + K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 101 bits (241), Expect = 6e-22
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Frame = +3
Query: 141 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNT 320
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 321 GRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARHGK-----------IFVGG 467
RSRGF F+ F + M H I+ V P +A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 468 LXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKTPKRTIG 647
+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ + +
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVN 180
Query: 648 G 650
G
Sbjct: 181 G 181
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMA 386
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+ + +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 387 AGEHTINNXKVXPXKAKAR 443
H +N + K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 78.6 bits (185), Expect = 4e-15
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Frame = +3
Query: 255 LRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKA 434
+R+ + +GEI I V DP T RSRGF F+ F + M H I+ V P +A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 435 KARHGK-----------IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFC 581
R K ++V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 582 FITFESEQXVNDLLKTPKRTIGG 650
F+TF+ V+ + + G
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNG 143
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMA 386
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+ + +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 387 AGEHTINNXKVXPXKAKAR 443
H +N + K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 78.6 bits (185), Expect = 4e-15
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Frame = +3
Query: 255 LRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKA 434
+R+ + +GEI I V DP T RSRGF F+ F + M H I+ V P +A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 435 KARHGK-----------IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFC 581
R K ++V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 582 FITFESEQXVNDLLKTPKRTIGG 650
F+TF+ V+ + + G
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNG 143
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMA 386
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+ + +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 387 AGEHTINNXKVXPXKAKAR 443
H +N + K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 64.9 bits (151), Expect = 5e-11
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMA 386
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 387 AGEHTINNXKVXPXKAKARHG------------------KIFVGGLXXEI-SDDEIXNFF 509
H + V +A R K+ + G+ + S D + +F
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 168
Query: 510 SEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLL 623
FGT+ QVE+ Q +G F+ +E ++ + L
Sbjct: 169 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCL 201
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKT 629
K+F+GGL + +D+++ N+FS++G ++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 630 PKRTIGG 650
+GG
Sbjct: 110 RPHKLGG 116
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 64.9 bits (151), Expect = 5e-11
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMA 386
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 387 AGEHTINNXKVXPXKAKARHG------------------KIFVGGLXXEI-SDDEIXNFF 509
H + V +A R K+ + G+ + S D + +F
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 188
Query: 510 SEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLL 623
FGT+ QVE+ Q +G F+ +E ++ + L
Sbjct: 189 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCL 221
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKT 629
K+F+GGL + +D+++ N+FS++G ++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 630 PKRTIGG 650
+GG
Sbjct: 130 RPHKLGG 136
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 64.9 bits (151), Expect = 5e-11
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMA 386
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 387 AGEHTINNXKVXPXKAKARHG------------------KIFVGGLXXEI-SDDEIXNFF 509
H + V +A R K+ + G+ + S D + +F
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189
Query: 510 SEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLL 623
FGT+ QVE+ Q +G F+ +E ++ + L
Sbjct: 190 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCL 222
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKT 629
K+F+GGL + +D+++ N+FS++G ++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 630 PKRTIGG 650
+GG
Sbjct: 131 RPHKLGG 137
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Frame = +3
Query: 195 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESI- 371
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 372 XKVMAAGEHTINNXKVXPXKAKARH------GKIFVGGLXXEISDDEIXNFFSEFGTILQ 533
+ + + KA A IFVG L E+ + + + FS FG ILQ
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
Query: 534 V-EMPFDKTKNQRKGFCFITFES 599
V ++ D KGF FI F S
Sbjct: 129 VPKIMRDVDSGTSKGFAFINFAS 151
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 177 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI-NVKTDPNTGRSRGFAFIVF 353
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 354 KAPESIXKVMAA 389
+ E+ + A
Sbjct: 150 ASFEASDTALEA 161
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 423 PXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESE 602
P + + I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E
Sbjct: 5 PIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGE 64
Query: 603 QXVNDLLK 626
+ + +K
Sbjct: 65 EDADYAIK 72
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Frame = +3
Query: 195 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESI- 371
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 372 XKVMAAGEHTINNXKVXPXKAKARH------GKIFVGGLXXEISDDEIXNFFSEFGTILQ 533
+ + + KA A IFVG L E+ + + + FS FG ILQ
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
Query: 534 V-EMPFDKTKNQRKGFCFITFES 599
V ++ D KGF FI F S
Sbjct: 139 VPKIMRDVDSGTSKGFAFINFAS 161
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 177 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI-NVKTDPNTGRSRGFAFIVF 353
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 354 KAPESIXKVMAA 389
+ E+ + A
Sbjct: 160 ASFEASDTALEA 171
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 423 PXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESE 602
P + + I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E
Sbjct: 15 PIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGE 74
Query: 603 QXVNDLLK 626
+ + +K
Sbjct: 75 EDADYAIK 82
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/81 (28%), Positives = 42/81 (51%)
Frame = +3
Query: 177 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFK 356
+AE + D R ++VG + W++T E+ +HF G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 357 APESIXKVMAAGEHTINNXKV 419
ES+ + N K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAG 392
L+VG L + + L + F A G + SI V D T S G+A++ F+ P + M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 393 EHTINNXKV--------XPXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPF 548
+ K P ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 549 DKTKNQRKGFCFITFESEQXVNDLLK 626
D+ KG+ F+ FE+E+ + ++
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQ 178
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +3
Query: 168 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 347
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 348 VFKAPE 365
F+ PE
Sbjct: 363 CFEKPE 368
Score = 33.1 bits (72), Expect = 0.18
Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 26/139 (18%)
Frame = +3
Query: 267 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESI-XKVMAAGEHTINNXKV-----XPX 428
F +G I S V T G+S+GF F+ F PE V A + TI +
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 429 KAKARHGK--------------------IFVGGLXXEISDDEIXNFFSEFGTILQVEMPF 548
K RH + ++V L + DD + F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 549 DKTKNQRKGFCFITFESEQ 605
D+ + KGF F+ FE +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAG 392
L+VG L + + L + F A G + SI V D T S G+A++ F+ P + M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 393 EHTINNXKV--------XPXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPF 548
+ K P ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 549 DKTKNQRKGFCFITFESEQXVNDLLK 626
D+ KG+ F+ FE+E+ + ++
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQ 178
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +3
Query: 168 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 347
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 348 VFKAPE 365
F+ PE
Sbjct: 363 CFEKPE 368
Score = 33.1 bits (72), Expect = 0.18
Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 26/139 (18%)
Frame = +3
Query: 267 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESI-XKVMAAGEHTINNXKV-----XPX 428
F +G I S V T G+S+GF F+ F PE V A + TI +
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 429 KAKARHGK--------------------IFVGGLXXEISDDEIXNFFSEFGTILQVEMPF 548
K RH + ++V L + DD + F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 549 DKTKNQRKGFCFITFESEQ 605
D+ + KGF F+ FE +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 54.8 bits (126), Expect = 5e-08
Identities = 36/161 (22%), Positives = 65/161 (40%), Gaps = 5/161 (3%)
Frame = +3
Query: 153 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSR 332
GG D +++VG + + + L F G+I + + DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241
Query: 333 GFAFIVFKAPESIXKVMAAGE-HTINNXKVXPXKAKARHGKIFVGGLXXEISDDEIXNFF 509
G+AF+ + E + H I+ K + ++F+G + S DEI
Sbjct: 242 GYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEEL 301
Query: 510 SEFG----TILQVEMPFDKTKNQRKGFCFITFESEQXVNDL 620
++ +P D K + +GFCF+ F + +D+
Sbjct: 302 KTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTASDI 341
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +3
Query: 162 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRG 335
+Q N+ G D K+FVGGL + T+DK L ++F +G+I V TD NT +SRG
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 336 FAFIVFK 356
+ F+ K
Sbjct: 78 YGFVTMK 84
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKT 629
KIFVGGL SD + +F +FG I + + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 630 PKRTIGG 650
P I G
Sbjct: 96 PNPIIDG 102
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 54.0 bits (124), Expect = 9e-08
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Frame = +3
Query: 186 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGR-SRGFAFIVFKAP 362
APG +D R +FV L + TT+ E+R A + SI N+ RGFA++V +
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 363 ESIXKVMAAGEHTINNXKVX-----PXK-------AKARHGKIFVGGLXXEISDDEIXNF 506
+ + + + + P K K+FV + + +DDE+
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Query: 507 FSEFGTILQVEMPFDKTKNQRKGFCFITFESE 602
FS+FGT+ V K + KG F+ F++E
Sbjct: 703 FSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTE 733
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 54.0 bits (124), Expect = 9e-08
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAG 392
L++G L + ++ L + F G + SI V D + S G+A++ F+ P + +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 393 EHTINNXKV--------XPXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPF 548
+ + + P +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 549 DKTKNQRKGFCFITFESE 602
D N KG+ F+ FE+E
Sbjct: 179 DDEGNS-KGYGFVHFETE 195
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 45.2 bits (102), Expect = 4e-05
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 14/153 (9%)
Frame = +3
Query: 186 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
A R + +F+ L +K + D F +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 366 S----IXKV--MAAGEHTINNXKVXPXKAKAR--------HGKIFVGGLXXEISDDEIXN 503
S I KV M + + K P + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 504 FFSEFGTILQVEMPFDKTKNQRKGFCFITFESE 602
FS+FG I + D + + KGF F+ F +
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQ 288
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
++V + +++DD + + FS FGTI ++ D+ + KGF F+ FE +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPE 394
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 54.0 bits (124), Expect = 9e-08
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAG 392
L++G L + ++ L + F G + SI V D + S G+A++ F+ P + +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 393 EHTINNXKV--------XPXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPF 548
+ + + P +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 549 DKTKNQRKGFCFITFESE 602
D N KG+ F+ FE+E
Sbjct: 179 DDEGNS-KGYGFVHFETE 195
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 45.2 bits (102), Expect = 4e-05
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 14/153 (9%)
Frame = +3
Query: 186 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
A R + +F+ L +K + D F +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 366 S----IXKV--MAAGEHTINNXKVXPXKAKAR--------HGKIFVGGLXXEISDDEIXN 503
S I KV M + + K P + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 504 FFSEFGTILQVEMPFDKTKNQRKGFCFITFESE 602
FS+FG I + D + + KGF F+ F +
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQ 288
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
++V + +++DD + + FS FGTI ++ D+ + KGF F+ FE +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPE 394
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 54.0 bits (124), Expect = 9e-08
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
Frame = +3
Query: 210 KLFVGGLSWETTDKELRDHFGAYGEIX-SINVKTDPNT-GRS-----RGFAFIVFKAPES 368
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 369 IXKVMAAGEHTINNX------------KVXPX--------KAKARHGKI-------FVGG 467
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 468 LXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLK 626
L ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 37.5 bits (83), Expect = 0.008
Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 8/133 (6%)
Frame = +3
Query: 264 HFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKAR 443
HFG++ + + N + R K+ + A HT+ +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 444 HGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQR--------KGFCFITFES 599
K+FVGG+ ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 600 EQXVNDLLKTPKR 638
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 54.0 bits (124), Expect = 9e-08
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
Frame = +3
Query: 210 KLFVGGLSWETTDKELRDHFGAYGEIX-SINVKTDPNT-GRS-----RGFAFIVFKAPES 368
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 369 IXKVMAAGEHTINNX------------KVXPX--------KAKARHGKI-------FVGG 467
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 468 LXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLK 626
L ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 37.5 bits (83), Expect = 0.008
Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 8/133 (6%)
Frame = +3
Query: 264 HFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKAR 443
HFG++ + + N + R K+ + A HT+ +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 444 HGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQR--------KGFCFITFES 599
K+FVGG+ ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 600 EQXVNDLLKTPKR 638
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 54.0 bits (124), Expect = 9e-08
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
Frame = +3
Query: 210 KLFVGGLSWETTDKELRDHFGAYGEIX-SINVKTDPNT-GRS-----RGFAFIVFKAPES 368
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 369 IXKVMAAGEHTINNX------------KVXPX--------KAKARHGKI-------FVGG 467
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 468 LXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLK 626
L ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 37.5 bits (83), Expect = 0.008
Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 8/133 (6%)
Frame = +3
Query: 264 HFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKAR 443
HFG++ + + N + R K+ + A HT+ +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 444 HGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQR--------KGFCFITFES 599
K+FVGG+ ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 600 EQXVNDLLKTPKR 638
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +3
Query: 183 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAP 362
EA ++ + +++ + W T +L +F YG I S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 363 ESIXKVMAAGEHTINNXKV 419
+ K + H I+ +V
Sbjct: 77 DGANKAIEQRPHVIDGDRV 95
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +3
Query: 399 TINNXKVXPXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGF 578
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 579 CFITFESEQXVNDLLKTPKRTIGG 650
ITF+S+ N ++ I G
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDG 92
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAA- 389
L + L T +E+R F + GEI S + D TG+S G+ F+ + E + +++
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 390 -----GEHTINNXKVXPXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDK 554
TI P + + ++V G+ ++ E+ + F FG I+ + D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163
Query: 555 TKNQRKGFCFITFESEQXVNDLLKT 629
KG F+ F+ + + +KT
Sbjct: 164 VTGLSKGVGFVRFDKKDEADVAIKT 188
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES 599
+FV L + D + FS+FG I+ V++ D T+ Q KG+ F++ +
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSN 423
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/77 (37%), Positives = 38/77 (49%)
Frame = +3
Query: 135 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDP 314
G GGG + + + L V LS TT+K+LRD FG +GEI ++ D
Sbjct: 52 GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDR 111
Query: 315 NTGRSRGFAFIVFKAPE 365
+G SRGF FI F E
Sbjct: 112 PSGNSRGFGFIYFNLIE 128
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 483 SDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
++ ++ + F EFG I + ++ +D+ +GF FI F
Sbjct: 88 TEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 51.6 bits (118), Expect = 5e-07
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 24/171 (14%)
Frame = +3
Query: 174 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVK---------------- 305
++A A ++ +FVG + +K +R F +G I S+ ++
Sbjct: 132 SNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHL 191
Query: 306 TDPNTGRSRGFAFIV-FKAPESIXKVMAAG-----EHTINNXKVXPXKAK-ARHGKIFVG 464
T + F V F A ES+ K + +H I KV K + + IFVG
Sbjct: 192 TGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVG 251
Query: 465 GLXXEISDDEIXNFFS-EFGTILQVEMPFDKTKNQRKGFCFITFESEQXVN 614
L EI++D + FFS + G + V + DK + KGF F+ F+ + V+
Sbjct: 252 NLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Frame = +3
Query: 96 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 266
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 267 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARH 446
F +G++ +++KT NT +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVDQ--AIQAKAEEQDRPIRAGGSRMKIGY 244
Query: 447 GK------IFVGGLXXEISDDEIXNFFSEFGTILQVE 539
GK +FVGGL + + F EFG + ++
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Frame = +3
Query: 96 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 266
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 267 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARH 446
F +G++ +++KT NT +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVDQ--AIQAKAEEQDRPIRAGGSRMKIGY 244
Query: 447 GK------IFVGGLXXEISDDEIXNFFSEFGTILQVE 539
GK +FVGGL + + F EFG + ++
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Frame = +3
Query: 96 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 266
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 106 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 165
Query: 267 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARH 446
F +G++ +++KT NT +AF++F+ + + A E + + K +
Sbjct: 166 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVDQ--AIQAKAEEQDRPIRAGGSRMKIGY 221
Query: 447 GK------IFVGGLXXEISDDEIXNFFSEFGTILQVE 539
GK +FVGGL + + F EFG + ++
Sbjct: 222 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 51.6 bits (118), Expect = 5e-07
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Frame = +3
Query: 210 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAP-------ES 368
+++VG +S+E + LR F +G I SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 369 IXKVMAAGEH-------------TINNXKVXP-----XKAKARHGKIFVGGLXXEISDDE 494
+ M G + N + P K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 495 IXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES 599
+ + F FG I++ ++ T +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 51.6 bits (118), Expect = 5e-07
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Frame = +3
Query: 210 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAP-------ES 368
+++VG +S+E + LR F +G I SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 369 IXKVMAAGEH-------------TINNXKVXP-----XKAKARHGKIFVGGLXXEISDDE 494
+ M G + N + P K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 495 IXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES 599
+ + F FG I++ ++ T +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 51.6 bits (118), Expect = 5e-07
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Frame = +3
Query: 210 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAP-------ES 368
+++VG +S+E + LR F +G I SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 369 IXKVMAAGEH-------------TINNXKVXP-----XKAKARHGKIFVGGLXXEISDDE 494
+ M G + N + P K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 495 IXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES 599
+ + F FG I++ ++ T +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/105 (27%), Positives = 53/105 (50%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
D +++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S +
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TI 93
Query: 381 MAAGEHTINNXKVXPXKAKARHGKIFVGGLXXEISDDEIXNFFSE 515
+A N + + H + + E +DDE + E
Sbjct: 94 LAV--DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEE 136
Score = 42.3 bits (95), Expect = 3e-04
Identities = 14/51 (27%), Positives = 32/51 (62%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
I++GGL +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 50.0 bits (114), Expect = 1e-06
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Frame = +3
Query: 168 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 341
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 342 FIVFKAPESIXKVMAAGEHTI-------NNXKVXPXKAKARH-GKIFVGGLXXEISDDEI 497
F+ F + + A H I + ++ P + R+ K+F+G L + +++ +
Sbjct: 100 FVTFYHRKDAIEAQGA-LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENL 158
Query: 498 XNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
F++FG I + D+ R G F+TF
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 50.0 bits (114), Expect = 1e-06
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Frame = +3
Query: 168 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 341
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 342 FIVFKAPESIXKVMAAGEHTI-------NNXKVXPXKAKARH-GKIFVGGLXXEISDDEI 497
F+ F + + A H I + ++ P + R+ K+F+G L + +++ +
Sbjct: 100 FVTFYHRKDAIEAQGA-LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENL 158
Query: 498 XNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
F++FG I + D+ R G F+TF
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 174 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 347
N AE P +D R LFVG +++ET++ +LR F AYG+I + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 348 VF 353
+
Sbjct: 150 EY 151
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 50.0 bits (114), Expect = 1e-06
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Frame = +3
Query: 168 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 341
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 342 FIVFKAPESIXKVMAAGEHTI-------NNXKVXPXKAKARH-GKIFVGGLXXEISDDEI 497
F+ F + + A H I + ++ P + R+ K+F+G L + +++ +
Sbjct: 100 FVTFYHRKDAIEAQGA-LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENL 158
Query: 498 XNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
F++FG I + D+ R G F+TF
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 50.0 bits (114), Expect = 1e-06
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Frame = +3
Query: 168 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 341
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 342 FIVFKAPESIXKVMAAGEHTI-------NNXKVXPXKAKARH-GKIFVGGLXXEISDDEI 497
F+ F + + A H I + ++ P + R+ K+F+G L + +++ +
Sbjct: 100 FVTFYHRKDAIEAQGA-LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENL 158
Query: 498 XNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
F++FG I + D+ R G F+TF
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 50.0 bits (114), Expect = 1e-06
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Frame = +3
Query: 168 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 341
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 342 FIVFKAPESIXKVMAAGEHTI-------NNXKVXPXKAKARH-GKIFVGGLXXEISDDEI 497
F+ F + + A H I + ++ P + R+ K+F+G L + +++ +
Sbjct: 100 FVTFYHRKDAIEAQGA-LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENL 158
Query: 498 XNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
F++FG I + D+ R G F+TF
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 50.0 bits (114), Expect = 1e-06
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Frame = +3
Query: 168 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 341
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 342 FIVFKAPESIXKVMAAGEHTI-------NNXKVXPXKAKARH-GKIFVGGLXXEISDDEI 497
F+ F + + A H I + ++ P + R+ K+F+G L + +++ +
Sbjct: 100 FVTFYHRKDAIEAQGA-LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENL 158
Query: 498 XNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
F++FG I + D+ R G F+TF
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/97 (21%), Positives = 45/97 (46%)
Frame = +3
Query: 129 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKT 308
+N N + SQ + E D + ++VG + + T +E+ HF G + + ++
Sbjct: 52 MNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQC 111
Query: 309 DPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKV 419
D +G +GFA++ F E + +A + + ++
Sbjct: 112 DRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQI 148
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +3
Query: 429 KAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQX 608
KA+A ++VG + + +EI F G++ +V + D+ KGF ++ F ++
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEG 131
Query: 609 VNDLL 623
+ + L
Sbjct: 132 MQNAL 136
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF 353
++VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEF 53
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESE 602
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 48.0 bits (109), Expect = 6e-06
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Frame = +3
Query: 189 PGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ + +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 366 SIXKVMAA--GEHTINNX----KVXPXKAKARHG---------KIFVGGLXXEISDDEIX 500
S + A + T+ +V P +R K+F+G L + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVR 141
Query: 501 NFFSEFGTILQVEMPFDKTKNQRKGFCFITFE 596
F+ FG + +V + KG F+ ++
Sbjct: 142 ALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 168 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 347
D A + DD+KLF+G LS + ++ E+R F +GE+ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 348 VFK 356
+K
Sbjct: 170 KYK 172
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 48.0 bits (109), Expect = 6e-06
Identities = 41/187 (21%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Frame = +3
Query: 126 QLNGNAENGGGDSQDHNSAEAPGRDDDRK---LFVGGLSWETTDKELRDHFGAYGEIXSI 296
++ + ++ D +D S + D + L V G+ ++TTD+ + +F G +
Sbjct: 143 KVGSSDDSDSDDGRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFC 202
Query: 297 NVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTIN----NXKVXPXKAKARH---GKI 455
+K + G S+GF F+ + KV+A +H I+ + KV + K +I
Sbjct: 203 EIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRI 261
Query: 456 FVGGLXXEISDDEIXNFF-SEFGTILQVEMPFDK-TKNQRKGFCFITFESEQXVNDLLKT 629
FVG L ++ + ++ F E + ++ + D +GF F+T S + ++
Sbjct: 262 FVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAERIVSK 321
Query: 630 PKRTIGG 650
T+ G
Sbjct: 322 GSLTVNG 328
Score = 37.1 bits (82), Expect = 0.011
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 192 GRDDDRKLFVGGLSWETTDKELRDHFGAYGE-IXSINVKTDPNTGRS-RGFAFIVFKAPE 365
GR ++FVG L+ + + +LR FG + V TD + RGFAF+ + E
Sbjct: 254 GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAE 313
Query: 366 SIXKVMAAGEHTINNXKVXPXKAKAR 443
+ ++++ G T+N V A+ R
Sbjct: 314 AAERIVSKGSLTVNGLSVGLSIAQPR 339
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 48.0 bits (109), Expect = 6e-06
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Frame = +3
Query: 189 PGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ + +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 366 SIXKVMAA--GEHTINNX----KVXPXKAKARHG---------KIFVGGLXXEISDDEIX 500
S + A + T+ +V P +R K+F+G L + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVR 141
Query: 501 NFFSEFGTILQVEMPFDKTKNQRKGFCFITFE 596
F+ FG + +V + KG F+ ++
Sbjct: 142 ALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 168 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 347
D A + DD+KLF+G LS + ++ E+R F +GE+ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 348 VFK 356
+K
Sbjct: 170 KYK 172
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 47.6 bits (108), Expect = 8e-06
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Frame = +3
Query: 192 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF------ 353
G D+ R L+VG L T+ + F G + V D G + +AF+ F
Sbjct: 41 GSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQA 97
Query: 354 -KAPESIXKVMAAGEHTINNXKVXPXKAKA-----RHGKIFVGGLXXEISDDEIXNFFSE 515
+A +++ K + N V P + ++ RH +FVG L E+ + ++ F
Sbjct: 98 SQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP 157
Query: 516 FGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
FG + ++ D + KG+ F+++ +
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 187
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF-KAPESIXKVMAA 389
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + K E+ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 390 GEHTINNXKVXPXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQ- 566
+ + A + G E S DEI N S T + V T+++
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI 256
Query: 567 RKGF 578
R+GF
Sbjct: 257 RQGF 260
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 47.6 bits (108), Expect = 8e-06
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 82
Query: 381 MAAGEHTINNXKVXPXKAKARHGK----------------------IFVGGLXXEISDDE 494
+A + + + A + + V L +I +
Sbjct: 83 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 142
Query: 495 IXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES 599
I + F FG I ++++ D + R GF ITF +
Sbjct: 143 IRDIFESFGRIEKIDLEVDSNRENR-GFATITFRN 176
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 186 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
APG + V L + +K +RD F ++G I I+++ D N +RGFA I F+ +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 366 SIXK 377
K
Sbjct: 179 DAQK 182
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 492 EIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXV 611
++ FFS G + V + D + KG C++ F E+ V
Sbjct: 40 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 47.6 bits (108), Expect = 8e-06
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 227
Query: 381 MAAGEHTINNXKVXPXKAKARHGK----------------------IFVGGLXXEISDDE 494
+A + + + A + + V L +I +
Sbjct: 228 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 287
Query: 495 IXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES 599
I + F FG I ++++ D + R GF ITF +
Sbjct: 288 IRDIFESFGRIEKIDLEVDSNRENR-GFATITFRN 321
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 186 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
APG + V L + +K +RD F ++G I I+++ D N +RGFA I F+ +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 366 SIXK 377
K
Sbjct: 324 DAQK 327
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 492 EIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXV 611
++ FFS G + V + D + KG C++ F E+ V
Sbjct: 185 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +3
Query: 444 HGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLL 623
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 624 K 626
+
Sbjct: 164 E 164
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF 353
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESE 602
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +3
Query: 168 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 347
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 348 VFKAPE 365
F+ PE
Sbjct: 303 CFEKPE 308
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVM 383
L+VG L + + L + F A G + SI V D T S G+A++ F+ P + M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 33.1 bits (72), Expect = 0.18
Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 26/139 (18%)
Frame = +3
Query: 267 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESI-XKVMAAGEHTINNXKV-----XPX 428
F +G I S V T G+S+GF F+ F PE V A + TI +
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 429 KAKARHGK--------------------IFVGGLXXEISDDEIXNFFSEFGTILQVEMPF 548
K RH + ++V L + DD + F +G I ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 549 DKTKNQRKGFCFITFESEQ 605
D+ + KGF F+ FE +
Sbjct: 291 DE-NGRSKGFGFVCFEKPE 308
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +3
Query: 168 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFI 347
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 348 VFKAPE 365
F+ PE
Sbjct: 300 CFEKPE 305
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 423 PXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESE 602
P ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+E
Sbjct: 49 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETE 107
Query: 603 QXVNDLLK 626
+ + ++
Sbjct: 108 EAAQNAIQ 115
Score = 33.1 bits (72), Expect = 0.18
Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 26/139 (18%)
Frame = +3
Query: 267 FGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESI-XKVMAAGEHTINNXKV-----XPX 428
F +G I S V T G+S+GF F+ F PE V A + TI +
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 429 KAKARHGK--------------------IFVGGLXXEISDDEIXNFFSEFGTILQVEMPF 548
K RH + ++V L + DD + F +G I ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 549 DKTKNQRKGFCFITFESEQ 605
D+ + KGF F+ FE +
Sbjct: 288 DE-NGRSKGFGFVCFEKPE 305
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 195 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIX 374
R D+ V L E + ELRD FG G + I + D TG +GFAF+ F++ +
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 375 KVMA 386
+ +A
Sbjct: 232 RAIA 235
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 459 VGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES 599
V L E+++DE+ + F + G ++++ + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF 353
++VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESE 602
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 44.8 bits (101), Expect = 5e-05
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Frame = +3
Query: 168 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFA 341
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 342 FIVFKAPESIXKVMAAGEHTI-------NNXKVXPXKAKARH-GKIFVGGLXXEISDDEI 497
F+ F + + A H I + ++ P + R+ K+F+G L + +++ +
Sbjct: 100 FVTFYHRKDAIEAQGA-LHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENL 158
Query: 498 XNFFSEFGTI 527
F++FG I
Sbjct: 159 REIFAKFGHI 168
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
K+FVG + + ++ + F ++G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRG 335
++RKLF+G LS + ++ LR+ F +G I +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
R L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE 63
Score = 36.7 bits (81), Expect = 0.014
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +3
Query: 441 RHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFE 596
R ++VGG ++++ + F FG ++ + +P D + +GF F+ F+
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
+FVG + ++S+D I + FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 192 GRD-DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF 353
G D R +FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF-KAPESIXKVMAA 389
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + K E+ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 390 GEHTINNXKVXPXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQ- 566
+ + A + G E S DEI N S T + V T+++
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI 143
Query: 567 RKGF 578
R+GF
Sbjct: 144 RQGF 147
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 441 RHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
RH +FVG L E+ + ++ F FG + ++ D + KG+ F+++ +
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF-KAPESIXKVMAA 389
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + K E+ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 390 GEHTINNXKVXPXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQ- 566
+ + A + G E S DEI N S T + V T+++
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI 153
Query: 567 RKGF 578
R+GF
Sbjct: 154 RQGF 157
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 441 RHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
RH +FVG L E+ + ++ F FG + ++ D + KG+ F+++ +
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVF-KAPESIXKVMAA 389
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + K E+ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 390 GEHTINNXKVXPXKAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQ- 566
+ + A + G E S DEI N S T + V T+++
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEI 224
Query: 567 RKGF 578
R+GF
Sbjct: 225 RQGF 228
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 441 RHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
RH +FVG L E+ + ++ F FG + ++ D + KG+ F+++ +
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTK 560
++VG L +++D I F++ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLK- 626
+IFVGG ++ E+ F +F + V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 627 TPKR 638
TPK+
Sbjct: 126 TPKQ 129
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +3
Query: 210 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
++FVGG TT+ ELR+HF + + + + + G+S+G+ FI F+ + ++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 122
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLK- 626
+IFVGG ++ E+ F +F + V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 627 TPKR 638
TPK+
Sbjct: 127 TPKQ 130
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +3
Query: 210 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
++FVGG TT+ ELR+HF + + + + + G+S+G+ FI F+ + ++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 123
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 210 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAA 389
+LF+ L + T + +L+ F YGE+ + V D TG +GFA + F PE+ +A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +3
Query: 210 KLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAA 389
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 390 GEHTINNXK 416
T N K
Sbjct: 63 SNQTFFNSK 71
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +3
Query: 141 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNT 320
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 321 GRSRGFAFIVF 353
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +3
Query: 141 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNT 320
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 321 GRSRGFAFIVF 353
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 192 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFK 356
G +D+K++VG L + +KE+ D F YG I +++K +GR FAF+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 192 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFK 356
G +D+K++VG L + +KE+ D F YG I +++K +GR FAF+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 42.3 bits (95), Expect = 3e-04
Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Frame = +3
Query: 171 HNSAEAPG--RDDDRK---LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRG 335
H+++E P R D K +FVG LS + +++ L+ F +GE+ V D T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 336 FAFIVFKAPESIXKVMAA------GEHTI------------NNXKVXPXK----AKARHG 449
+ F+ F ++ +A G+ + N K+ + KA +
Sbjct: 178 YGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNT 237
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
++VG + + +D ++ + FS +G I +V + K QR + F+ +E ++
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRI----FKTQR--YAFVRYEKKE 283
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/62 (24%), Positives = 38/62 (61%)
Frame = +3
Query: 438 ARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVND 617
++H +FVG L ++S++ + + F++FG + + ++ D + KG+ F++F ++Q +
Sbjct: 132 SKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAEN 191
Query: 618 LL 623
+
Sbjct: 192 AI 193
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
D+ ++VG +S +TTD +LRD F YG+I + + +++ +AF+ ++ E K
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKA 288
Query: 381 M 383
+
Sbjct: 289 I 289
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
D + +F+G + + +T +E+ +HF G+I + D T + + FA+I F SI
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Query: 381 M 383
+
Sbjct: 113 L 113
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.7 bits (91), Expect = 9e-04
Identities = 14/57 (24%), Positives = 33/57 (57%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLL 623
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAI 113
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 159 DSQDHNSAEAPGRDDDRKL-FVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRG 335
D + ++ AP R + + FV + E T+ ++ D F YG+I +I++ D TG +G
Sbjct: 38 DEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKG 97
Query: 336 FAFIVFKAPESIXKVMAAGEHT 401
+A + ++ + + + T
Sbjct: 98 YALVEYETQKEANEAIDQSNDT 119
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
D + +F+G + + +T +E+ +HF G I + D T + + FA+I F SI
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
Query: 381 M 383
+
Sbjct: 119 L 119
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 15/151 (9%)
Frame = +3
Query: 186 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
A G +D R LFV L TD+ L F G + + + G + +AF+ F
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHN 89
Query: 366 SIXKVMAA--GEHTINNX----------KVXPXKAK---ARHGKIFVGGLXXEISDDEIX 500
+ + G + + ++K +RH +FVG L EI ++
Sbjct: 90 QATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLR 149
Query: 501 NFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
F +FG + + ++ D N+ KG+ F+++
Sbjct: 150 EAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVM 383
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E + +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 429 KAKARHGKIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES-EQ 605
+A A + ++VG + + +DEI F FG I +V + +G+ F+ FE+ E
Sbjct: 250 QAAADNTSVYVGNIA-NLGEDEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKES 302
Query: 606 XVNDLLKTPKRTIGG 650
+++ IGG
Sbjct: 303 AARAIVQMNNADIGG 317
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 189 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPES 368
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 369 IXKVMAA 389
K AA
Sbjct: 103 CEKARAA 109
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 189 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPES 368
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 369 IXKVMAA 389
K AA
Sbjct: 103 CEKARAA 109
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
+++ GL +DD + S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQ 605
+++ GL +DD + S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +3
Query: 204 DRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVM 383
+R L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I
Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAK 71
Query: 384 AAGEH 398
A EH
Sbjct: 72 TACEH 76
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 37.1 bits (82), Expect = 0.011
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYG 281
RK+FVGG+ W+ T+ L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMP 545
KIFVGG+ +I++ + + F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +3
Query: 225 GLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
GL WE T++ELRD FG G I S+ + GR+ G A +VF E
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEE 54
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +3
Query: 225 GLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
GL WE T++ELRD FG G I S+ + GR+ G A +VF E
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEE 54
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLKTP 632
++VG L +D++ F G + +V M D+ K GFCF+ + + + L+
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQNI 98
Query: 633 KRT 641
T
Sbjct: 99 SNT 101
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPE 365
L+VG LS+ T + ++ + FG G++ + + D GF F+ + E
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.9 bits (79), Expect = 0.025
Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 2/165 (1%)
Frame = +3
Query: 135 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEIXSINVKT 308
G + NG ++ E P + + LFVG L E + EL++ F +G+I +
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148
Query: 309 DPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARHGKIFVGGLXXEISD 488
+GFAF+ A + I + + + I V L +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202
Query: 489 DEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLL 623
+ + + FS FG + + D+ K + G + FE + N+ +
Sbjct: 203 EMLYHAFSHFGDVERAVHIVDE-KGRPTGEGIVEFERKPNCNEAM 246
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.9 bits (79), Expect = 0.025
Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 2/165 (1%)
Frame = +3
Query: 135 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEIXSINVKT 308
G + NG ++ E P + + LFVG L E + EL++ F +G+I +
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148
Query: 309 DPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARHGKIFVGGLXXEISD 488
+GFAF+ A + I + + + I V L +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202
Query: 489 DEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLL 623
+ + + FS FG + + D+ K + G + FE + N+ +
Sbjct: 203 EMLYHAFSHFGDVERAVHIVDE-KGRPTGEGIVEFERKPNCNEAM 246
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +3
Query: 198 DDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXK 377
D K+F+GGL T+ ++++ ++G + + ++ D + G S+G+AF + P +
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 378 VMA 386
+A
Sbjct: 347 AIA 349
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
KIF+GGL +++D++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMP 545
K+FVGGL + + +I NFFS +G LQV+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +3
Query: 198 DDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXK 377
D K+F+GGL T+ ++++ ++G + + ++ D + G S+G+AF + P +
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 378 VMA 386
+A
Sbjct: 347 AIA 349
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
KIF+GGL +++D++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +3
Query: 198 DDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXK 377
D K+F+GGL T+ ++++ ++G + + ++ D + G S+G+AF + P +
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 378 VMA 386
+A
Sbjct: 322 AIA 324
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
KIF+GGL +++D++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +3
Query: 198 DDDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXK 377
D K+F+GGL T+ ++++ ++G + + ++ D + G S+G+AF + P +
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 378 VMA 386
+A
Sbjct: 325 AIA 327
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITF 593
KIF+GGL +++D++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 35.1 bits (77), Expect = 0.044
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Frame = +3
Query: 132 NGNAENGGG-DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI---- 296
+G+A +GG D D + A DDRK+ V +S + T +L+ F YG+I S
Sbjct: 86 DGDAFDGGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
Query: 297 -NVKTD-----PNTGRSRGFAFIVFKAPE 365
KT P R+ G A I FK E
Sbjct: 146 EEKKTSVFGTLPKHSRNCGTATITFKKSE 174
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITF-ESEQXVNDLLK 626
++F G L E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 627 TPKRTIG 647
+ +G
Sbjct: 264 MDGKYVG 270
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPES 368
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 294
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES 599
+FV L +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPES 368
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 294
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES 599
+FV L +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 213 LFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPES 368
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 225
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFES 599
+FV L +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Frame = +3
Query: 378 VMAAGEHTINNXKVXPXKAKARHG-KIFVGGLXXEISDDEIXNFFSEFGTIL-------- 530
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPE 280
Query: 531 ----QVEMPFDKTKNQR--KGFCFITFESEQXVNDLL 623
+ E K R G+ F+ F E+ V +L+
Sbjct: 281 HNAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELV 317
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +3
Query: 198 DDDRKLFVGGLSWETTDKEL-RDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIX 374
D R +F+GG+ T ++L R G YG++ + + DP +G A + F ++
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 375 KVMAAG----EHTINNXKV 419
+ ++ H NN +V
Sbjct: 422 RAISGRFVQVNHAENNKRV 440
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +3
Query: 207 RKLFVGGLSWETTDKELRDHFGAYGEI 287
RK+F+GGL + +++++ FGA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAP 362
+ + +F+ LS++T ++ +++ +G+I + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +3
Query: 213 LFVGGL----SWETTDKELRDHFGAYGEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKV 380
L++G L + + T+K+L D F YG+I + V T+ +G AFI F E+ +
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER- 289
Query: 381 MAAGEHTINNXKVXPXKAKARHGK 452
A E + N + + R G+
Sbjct: 290 --AAERSFNKTFIKGKRLTIRWGE 311
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLK 626
K++VGGL + + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLK 626
K++VGGL + + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVNDLLK 626
K++VGGL + + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXN------FFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXV 611
K F+GGL + +I F E + + D+ KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 612 N 614
N
Sbjct: 67 N 67
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +3
Query: 201 DDRKLFVGGLSWETTDKEL-RDHFGAYGEIXSI-----NVKTDPNTGRSRGFAFIVFK 356
++R+++VG + ++ T+KEL D Y I ++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 29.9 bits (64), Expect = 1.6
Identities = 8/39 (20%), Positives = 24/39 (61%)
Frame = +3
Query: 486 DDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESE 602
+ E+ +F +FG +L++ + ++ KG+ ++ F+++
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNK 83
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVND 617
++++G L SD ++ +FF +G + V M + GF F+ F+ ++ +D
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADD 50
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVND 617
+I++G L +S+ +I +FF +G I V + + GF F+ F+ ++ D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAED 51
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVND 617
+I++G L +S+ +I +FF +G I V + + GF F+ F+ ++ D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAED 51
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 450 KIFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDKTKNQRKGFCFITFESEQXVND 617
+I++G L +S+ +I +FF +G I V + + GF F+ F+ ++ D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAED 51
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -3
Query: 302 YINTXYFTVCSKMITELLICGLPAQPTNKKFSVVIASWGLSTVMILRITATVL 144
Y NT TV +K + E + + PT K ++ SW +S V + + T L
Sbjct: 1864 YANTTVGTVAAKFLREAALL-MDTPPTTPKERLLQCSWAMSKVPFINMILTCL 1915
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 201 DDRKLFVGGLSWET-TDKELRDHFGAYGEIXSINVKTD 311
+ ++LFV + T KEL+ +FGAYG+I + +D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD 66
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +3
Query: 279 GEIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVMAAGEHTINNXKVXPXKAKARH 446
G I I +T P SRGF IVF A ++ +V G H +N+ K K K H
Sbjct: 475 GVIGGICFRTFP----SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +3
Query: 117 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIXSI 296
T+N + N GG + N P +L G + WE K+++D F +YG I
Sbjct: 41 TENTRQRSNSNAGGSPDEQN----PQFGMQAQL--GKMMWEAGSKQVQDTFQSYGRIDLF 94
Query: 297 N--VKTDPNTGRSRGFAFIVFKAPESI 371
DP R+R + + P I
Sbjct: 95 RPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +3
Query: 216 FVGGLSWETTDKELRDHFGAYG----EIXSINVKTDPNTGRSRGFAFIVFKAPESIXKVM 383
+VG L W TTD +L + G + + + G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 87 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 212
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 87 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 212
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 108 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 206
D+ N+ N ++ + GGDS + E DDD
Sbjct: 416 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 108 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 206
D+ N+ N ++ + GGDS + E DDD
Sbjct: 432 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +3
Query: 453 IFVGGLXXEISDDEIXNFFSEFGTILQVEMPFDK 554
++VG L +++D I F++ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 637 LLGVLSKSFTXCSDSNVMKQKPFLWFFVLSKGISTCKI 524
L+G L S+ ++ PF +FF+ S+G ST KI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>AF101318-12|AAC69350.2| 400|Caenorhabditis elegans Hypothetical
protein Y73C8C.10 protein.
Length = 400
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 270 GAYGEIXSINVKTDPNTGRSRGFAFIVFKAPES 368
G YG I + NV DP S G A I+FK ES
Sbjct: 71 GKYGVILTSNVLVDPTNLESAGNA-IIFKEGES 102
>AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine
receptor, class w protein95 protein.
Length = 363
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 166 CESPPPFSAFPLSWLSVVIS 107
CE P P S F + W++VVI+
Sbjct: 107 CEPPAPLSFFYMYWINVVIN 126
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 304 RQIQTQADHEGLPSLCLR 357
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
>AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical
protein Y110A2AL.5 protein.
Length = 246
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -3
Query: 245 CGLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISIKLVVGG 114
C P QP + S+V+ W + + R A CI L + G
Sbjct: 143 CPAPGQPFRRTESLVVCIWTFNETVATREEAKTFCIGKGLKLTG 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,702,225
Number of Sequences: 27780
Number of extensions: 291689
Number of successful extensions: 1006
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -