Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_K04
         (649 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g13710.1 68414.m01611 cytochrome P450 family protein similar ...    28   4.7  

>At1g13710.1 68414.m01611 cytochrome P450 family protein similar to
           cytochrome P450 78A1 (SP:P48420) GI:349717 from [Zea
           mays]
          Length = 517

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -1

Query: 439 NWTDYFFFKRFYDLVTETFKSCXILLYILNFMKNDNME*NEMKMIN 302
           NW+D+F+F R++D      K C  L+  +N      +E ++MK  N
Sbjct: 237 NWSDHFWFLRWFDF-QGVRKRCRALVSEVNTFVGGIIEKHKMKKGN 281


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,689,754
Number of Sequences: 28952
Number of extensions: 204805
Number of successful extensions: 344
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)