Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_K01
(338 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0303 + 28324155-28325045,28326208-28326321 40 4e-04
05_07_0039 - 27239362-27239478,27240570-27241463 40 7e-04
08_01_0255 + 2089543-2089583,2089696-2090089,2090797-2090862,209... 36 0.011
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 32 0.100
03_05_0802 - 27823213-27823701,27823911-27823959,27824053-278241... 31 0.17
09_02_0319 + 7217262-7217372,7218026-7218121,7218642-7218771,721... 31 0.23
08_02_1540 + 27694565-27694579,27696364-27696447,27696599-276967... 30 0.40
11_01_0086 + 646609-647791,648838-649115,650502-650735 29 1.2
12_01_0087 + 692180-693361,695920-696150 28 1.6
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388... 28 1.6
02_02_0017 - 6131265-6131284,6131654-6131774,6132011-6132146,613... 27 2.8
02_02_0016 - 6118739-6118758,6119116-6119236,6119478-6119613,611... 27 2.8
08_01_0253 + 2072766-2072954,2073526-2073591,2073755-2073877,207... 27 3.8
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 27 3.8
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232... 27 3.8
03_02_0614 + 9863622-9863675,9864353-9864604,9865125-9865268,986... 27 3.8
06_03_0850 - 25354002-25354391,25354480-25354575,25355352-253556... 26 6.6
02_05_1085 + 33989863-33991179 26 6.6
02_01_0721 - 5373449-5373603,5373912-5373981,5374473-5374620,537... 26 6.6
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 26 8.7
04_01_0471 + 6099768-6100094,6100384-6100416 26 8.7
>01_06_0303 + 28324155-28325045,28326208-28326321
Length = 334
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +3
Query: 132 ETLKLRGTLXGHNGWVTQIATNPKYPDMILSSSRDKTLIAVEKLDPXE 275
E+L L G + GHN VT IAT I+SSSRDK+L+ + +P +
Sbjct: 6 ESLVLAGVMHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQ 53
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 162 GHNGWVTQIATNPK-YPDMILSSSRDKTL 245
GHNGWV+ + +P + I+S S D+T+
Sbjct: 163 GHNGWVSCVRFSPNTFQPTIVSGSWDRTV 191
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 141 KLRGTLXGHNGWVTQIATNP 200
KLR L GH G+V +A +P
Sbjct: 200 KLRCNLEGHGGYVNAVAVSP 219
>05_07_0039 - 27239362-27239478,27240570-27241463
Length = 336
Score = 39.5 bits (88), Expect = 7e-04
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +3
Query: 132 ETLKLRGTLXGHNGWVTQIATNPKYPDMILSSSRDKTLIAVEKLDP 269
E+L L G L GHN VT IA I+SSSRDK+L+ + +P
Sbjct: 5 ESLTLAGVLRGHNDMVTAIAAPIDNSPFIVSSSRDKSLLVWDITNP 50
Score = 29.1 bits (62), Expect = 0.93
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 141 KLRGTLXGHNGWVTQIATNPKYPDMILSSSRDKTLI 248
KLR L GHNG+V +A +P + S +D T +
Sbjct: 201 KLRTKLEGHNGYVNAVAVSPD-GSLCASGGKDGTTL 235
>08_01_0255 +
2089543-2089583,2089696-2090089,2090797-2090862,
2091067-2091189,2091605-2091685,2091765-2091857,
2092103-2092178,2092255-2092334,2092433-2092504,
2092937-2092996,2093177-2093273,2093498-2093561,
2093706-2093765,2093942-2094035
Length = 466
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/53 (30%), Positives = 33/53 (62%)
Frame = +3
Query: 87 ASGXSSLFKPFSKMSETLKLRGTLXGHNGWVTQIATNPKYPDMILSSSRDKTL 245
A+G + + + + +E K+ +L GH G V +I + P P +I+S+S+D+++
Sbjct: 189 AAGSTGIIRVINCATE--KIYKSLVGHGGSVNEIKSQPSNPSLIISASKDESI 239
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 32.3 bits (70), Expect = 0.100
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 153 TLXGHNGWVTQIATNPKYPDMILSSSRDKTL 245
TL GH G V ++ NP P M+ S+S D T+
Sbjct: 482 TLPGHTGTVNCVSWNPANPHMLASASDDHTI 512
>03_05_0802 -
27823213-27823701,27823911-27823959,27824053-27824120,
27824208-27824276,27824391-27824460,27824556-27824635,
27824706-27824784,27824949-27825025,27825110-27825176,
27825285-27825381,27825478-27825574,27825701-27825739,
27825843-27825907,27826034-27826142,27826275-27826487
Length = 555
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 132 ETLKLRGTLXGHNGWVTQIATNPKYPDMILSSSRDKTLIAVE-KLDP 269
E K G L GH G V ++ + P++I++ SRD + + ++DP
Sbjct: 149 ENKKCLGVLSGHTGSVKSLSCHSSNPELIVTGSRDGSFALWDLRIDP 195
>09_02_0319 +
7217262-7217372,7218026-7218121,7218642-7218771,
7219137-7219225,7219764-7219832,7220229-7220286,
7220374-7220489
Length = 222
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 156 LXGHNGWVTQIATNPKYPDMILSSSRDKTL 245
L GH V Q+ +PK+PD + +++ DK++
Sbjct: 77 LKGHTDCVDQLCWDPKHPDTVATAAADKSI 106
>08_02_1540 +
27694565-27694579,27696364-27696447,27696599-27696731,
27696840-27696951,27697530-27697629,27697810-27697937,
27698046-27698115,27698548-27698636,27698719-27698764,
27698854-27698924,27699002-27699075,27699341-27699433,
27699539-27699572,27699704-27699789,27702147-27702223,
27702445-27702533,27702630-27702813,27703068-27703249,
27703962-27704064,27704159-27704490,27704577-27705018,
27705749-27705846,27706988-27707081,27707666-27707787,
27708025-27708078,27708185-27708304,27708595-27708799,
27708889-27709059,27709155-27709310,27709375-27709431,
27709474-27709580,27709708-27709798,27709931-27710072,
27710149-27710305,27710400-27710516,27710596-27710722,
27710844-27711066,27711460-27711466,27711656-27711788
Length = 1574
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 156 LXGHNGWVTQIATNPKYPDMILSSSRDKTL 245
L GH+ W + NP++ +ILS+ D T+
Sbjct: 238 LPGHSHWTWAVRHNPEHDQLILSAGTDSTV 267
>11_01_0086 + 646609-647791,648838-649115,650502-650735
Length = 564
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 12 ISSSRSMVGHHRRFRVLLTRATGPDA 89
ISSS+ V HH+ + V+L + T P A
Sbjct: 161 ISSSKPSVNHHKDYSVVLKKLTTPSA 186
>12_01_0087 + 692180-693361,695920-696150
Length = 470
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 12 ISSSRSMVGHHRRFRVLLTRATGPDA 89
ISSS+ V HH+ + ++L + T P A
Sbjct: 161 ISSSKPSVNHHKDYSIVLKKLTTPSA 186
>02_04_0624 +
24538095-24538183,24538429-24538612,24538725-24538886,
24538988-24539225,24539301-24539370,24539439-24539530,
24539799-24539836,24540018-24540039,24540462-24540618,
24540702-24540753,24542144-24542207,24542279-24542362,
24543418-24543543,24543622-24543818,24543903-24544091,
24544186-24544434,24544507-24544556,24544977-24545059,
24545164-24545449,24545751-24545794,24545878-24546626
Length = 1074
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 189 ATNPKYPDMILSSSRDKTLIAVEKLDPXERKTKPPLP 299
++ Y DM++ S D ++ EK++P K P P
Sbjct: 663 SSKQNYADMVVGSEEDNAILFHEKINPYSVKLYVPCP 699
>02_02_0017 -
6131265-6131284,6131654-6131774,6132011-6132146,
6132423-6132529,6133006-6133099,6133199-6133395,
6134401-6134472,6135128-6135304,6135393-6135467,
6135557-6135697,6136439-6136627,6136969-6137034,
6137118-6137268,6137596-6137664,6138751-6138899,
6138969-6139100,6139198-6139523,6139599-6139635,
6139765-6139803,6140196-6140250,6140363-6140424,
6140512-6140532,6140820-6140822
Length = 812
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 162 GHNGWVTQIATNPKYPDMILSSSRDKTL 245
GH+ +V Q+ NPK + S+S D+T+
Sbjct: 153 GHSHYVMQVTFNPKDTNTFASASLDRTV 180
>02_02_0016 -
6118739-6118758,6119116-6119236,6119478-6119613,
6119887-6119993,6120316-6120409,6120509-6120705,
6121872-6121943,6122597-6122773,6122862-6122936,
6123027-6123167,6123837-6124025,6124415-6124480,
6124564-6124714,6125040-6125200,6126279-6126410,
6126508-6126833,6126906-6126942,6127056-6127088,
6127500-6127554,6127666-6127753,6127817-6127862
Length = 807
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 162 GHNGWVTQIATNPKYPDMILSSSRDKTL 245
GH+ +V Q+ NPK + S+S D+T+
Sbjct: 167 GHSHYVMQVTFNPKDTNTFASASLDRTV 194
>08_01_0253 +
2072766-2072954,2073526-2073591,2073755-2073877,
2073913-2074017,2074555-2074635,2074715-2074807,
2075023-2075098,2075182-2075261,2075359-2075430,
2075553-2075612,2075775-2075871,2076137-2076200,
2076303-2076362,2076539-2076608
Length = 411
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 153 TLXGHNGWVTQIATNPKYPDMILSSSRDKTL 245
T GH + +I T P +I+S+S+D+++
Sbjct: 162 TFVGHGDSINEIRTQALKPSLIISASKDESV 192
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 212 HDLIFLSRQNSHRCGKA*PXRTKNQTPFTGYYPP 313
H LSRQNS RCG A P +P + PP
Sbjct: 83 HSPFMLSRQNSGRCGTA-PSPLSVSSPSSWAPPP 115
>06_01_0320 -
2320317-2320336,2320791-2320902,2321092-2321236,
2321353-2321459,2321572-2321665,2321752-2321948,
2322311-2322382,2322504-2322618,2323060-2323176,
2323253-2323344,2323445-2323621,2323746-2323820,
2323911-2324051,2324671-2324859,2325298-2325363,
2325445-2325595,2325718-2325786,2326293-2326441,
2326526-2326657,2326756-2327081,2327167-2327203,
2327926-2327980,2328242-2328309,2328464-2328466
Length = 902
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 162 GHNGWVTQIATNPKYPDMILSSSRDKT 242
GH+ +V Q+ NPK + S+S D+T
Sbjct: 135 GHSHYVMQVTFNPKDTNTFASASLDRT 161
>03_02_0614 +
9863622-9863675,9864353-9864604,9865125-9865268,
9865350-9866024,9866117-9866317,9866446-9866646
Length = 508
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 150 GTLXGHNGWVTQIATNPKYPDMILSSSRDKTLIAVEKLDPXERKTKP 290
G L GH+G V ++ NP ++++S S D +I + L +R P
Sbjct: 28 GKLRGHDGCVNTVSFNPA-GNLLVSGSDDMDIILWDWLAKTQRLIYP 73
>06_03_0850 -
25354002-25354391,25354480-25354575,25355352-25355634,
25357213-25357799
Length = 451
Score = 26.2 bits (55), Expect = 6.6
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +3
Query: 72 ATGPDASGXSSLFKPFSKMSETLKLRGT--LXGHNGWVTQIATNPKYPDMILSSSRDKTL 245
A P A+ SL + F ++ L HN W + A Y S+ D +
Sbjct: 7 ARAPPAAEAQSLVESFCGVTSATPQEAAFFLESHN-WALESAVRSFYD----SADGDASA 61
Query: 246 IAVEKLDPXERKTKPPLP 299
A + DP R+ PP P
Sbjct: 62 AAADAADPPPRQPPPPPP 79
>02_05_1085 + 33989863-33991179
Length = 438
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 76 PDLTLQGSRRSSNHFQKCLKH 138
P +L+G RRS+ HF KC H
Sbjct: 341 PVYSLRGPRRSAAHFGKCGLH 361
>02_01_0721 -
5373449-5373603,5373912-5373981,5374473-5374620,
5374755-5374870,5374955-5375033,5375163-5375233,
5376201-5376344,5376439-5376592,5376906-5376941,
5377145-5377226,5377315-5377408,5377993-5378062,
5378177-5378274,5378745-5378827,5379335-5379428,
5379533-5380036
Length = 665
Score = 26.2 bits (55), Expect = 6.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -2
Query: 289 GLVFRSXGSSFSTAMRVL---SREEDKIMSGYFGLVAI*VTQPLWPXRVPRSFN 137
G+VF GS S+ +V + K SGY V + V PL P R+ +FN
Sbjct: 597 GVVFGDYGSDLSSGPKVPGDPAGARGKPGSGYGYGVGVRVDSPLGPLRLEYAFN 650
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 69 RATGPDASGXSSLFKPFSKMSETLKLRG 152
R GP A+G +S PFS + L L G
Sbjct: 46 RLLGPHAAGAASSHAPFSSIKRLLLLAG 73
>04_01_0471 + 6099768-6100094,6100384-6100416
Length = 119
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 9 GISSSRSMVGHHRRFRVLLTRATGPDAS 92
G + R +V HH+R + LT GP AS
Sbjct: 81 GARACRIVVPHHKRVAINLTALLGPLAS 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,649,890
Number of Sequences: 37544
Number of extensions: 144356
Number of successful extensions: 335
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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