Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_J23
         (607 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666...   295   1e-80
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414...    29   2.2  
08_01_0346 - 3063440-3064189                                           28   6.6  
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877...    27   8.7  
04_04_0634 - 26777889-26778452,26778526-26778797,26778905-267791...    27   8.7  

>07_03_1220 -
           24966169-24966327,24966421-24966552,24966639-24966693,
           24967496-24967667,24967771-24967918,24968015-24968050
          Length = 233

 Score =  295 bits (725), Expect = 1e-80
 Identities = 147/180 (81%), Positives = 157/180 (87%)
 Frame = +3

Query: 66  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 245
           ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 7   ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66

Query: 246 RIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 425
           RIRELTSV QKRFN P   V LYAEKV  RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 67  RIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126

Query: 426 FIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQXVLRI 605
           F+MESGA+GCEV+VSGKLR QRAKSMKF  G MI SG P N Y+++A RHVLLRQ VL I
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGI 186


>05_04_0322 +
           20239793-20240127,20240176-20240728,20241317-20241425,
           20244456-20244723,20244943-20245197,20245594-20246539
          Length = 821

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 323 GGYSWSLRYRPG-RISKIQAYRRSRCTSCLLWC 418
           G  SWS RY+    ISK   Y   RC  C++ C
Sbjct: 665 GALSWSRRYQIAIGISKGLPYLHERCRDCIIHC 697


>08_01_0346 - 3063440-3064189
          Length = 249

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 357 AESLRYKLIGGLAVRRACYGVLR 425
           A S    L+GG A   ACYGVLR
Sbjct: 221 ARSAARVLLGGWAAMAACYGVLR 243


>08_01_0892 -
           8778097-8778236,8778390-8778486,8778568-8778747,
           8779138-8779247,8781153-8781294,8782298-8782686,
           8782752-8782834,8783524-8785244,8785894-8786040,
           8786121-8786264,8786669-8786741,8787413-8787633
          Length = 1148

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/76 (21%), Positives = 34/76 (44%)
 Frame = -3

Query: 596 YSLPEKHMSGSSVDVVIARVSRVDHESXYKLH*FGTLTTQLARYNNFTTTGARFHDETEN 417
           + L +  + GS  +++   V R D ++ Y+    G ++     +NN +++G   HD   N
Sbjct: 739 FKLNQVCIDGSRDELLETDVIRQDIKALYQSIDMGLVSEATVCFNNVSSSGLSVHDTGGN 798

Query: 416 TIASTTYSETSDKLVS 369
            I         ++ +S
Sbjct: 799 VIGQGDQDSEKNRYLS 814


>04_04_0634 -
           26777889-26778452,26778526-26778797,26778905-26779117,
           26779497-26779578
          Length = 376

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 383 DKLVS*RFGLGDSAKTTSSHLFSIQXYRLLWNVESLLXYGS 261
           DKLV+ +FG GDS     S+   +Q +++    E  L Y S
Sbjct: 323 DKLVASQFGHGDSTAKEPSYCNPVQVFQVEGKQEDSLDYVS 363


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,664,873
Number of Sequences: 37544
Number of extensions: 334850
Number of successful extensions: 827
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)