Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_J23
(607 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 321 1e-87
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 321 1e-87
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 321 1e-87
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 321 1e-87
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 321 1e-87
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 321 1e-87
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 321 1e-87
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 321 1e-87
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 321 1e-87
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 320 2e-87
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 320 2e-87
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 320 3e-87
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 319 4e-87
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 319 6e-87
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 213 5e-55
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 202 1e-51
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 184 2e-46
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 160 4e-39
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 103 5e-22
BC040232-1|AAH40232.1| 696|Homo sapiens CCDC88B protein protein. 30 7.3
BC030194-1|AAH30194.1| 223|Homo sapiens CCDC88B protein protein. 30 7.3
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 321 bits (788), Expect = 1e-87
Identities = 161/185 (87%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 321 bits (788), Expect = 1e-87
Identities = 161/185 (87%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 321 bits (788), Expect = 1e-87
Identities = 161/185 (87%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 321 bits (788), Expect = 1e-87
Identities = 161/185 (87%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 321 bits (788), Expect = 1e-87
Identities = 161/185 (87%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 321 bits (788), Expect = 1e-87
Identities = 161/185 (87%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 321 bits (788), Expect = 1e-87
Identities = 161/185 (87%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 321 bits (788), Expect = 1e-87
Identities = 161/185 (87%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 321 bits (788), Expect = 1e-87
Identities = 161/185 (87%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 320 bits (786), Expect = 2e-87
Identities = 158/180 (87%), Positives = 166/180 (92%)
Frame = +3
Query: 66 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 245
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 246 RIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 425
RIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 426 FIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQXVLRI 605
FIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ VL I
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 320 bits (786), Expect = 2e-87
Identities = 158/180 (87%), Positives = 166/180 (92%)
Frame = +3
Query: 66 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 245
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 246 RIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 425
RIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 426 FIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQXVLRI 605
FIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ VL I
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 320 bits (785), Expect = 3e-87
Identities = 160/185 (86%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 319 bits (784), Expect = 4e-87
Identities = 160/185 (86%), Positives = 169/185 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 319 bits (783), Expect = 6e-87
Identities = 160/185 (86%), Positives = 168/185 (90%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 410
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAE LRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 411 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQ 590
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 591 XVLRI 605
VL I
Sbjct: 180 GVLGI 184
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 213 bits (519), Expect = 5e-55
Identities = 104/120 (86%), Positives = 109/120 (90%)
Frame = +3
Query: 237 KGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 416
+GRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 417 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQXV 596
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ V
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 202 bits (492), Expect = 1e-51
Identities = 102/118 (86%), Positives = 108/118 (91%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 404
GEKGRRIRELT+V QKRF P SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 184 bits (449), Expect = 2e-46
Identities = 90/99 (90%), Positives = 93/99 (93%)
Frame = +3
Query: 309 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 488
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 489 RAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQXVLRI 605
RAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ VL I
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 99
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 160 bits (388), Expect = 4e-39
Identities = 81/96 (84%), Positives = 86/96 (89%)
Frame = +3
Query: 51 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 230
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 231 GEKGRRIRELTSVXQKRFNIPXQSVXLYAEKVATRG 338
GEKGRRIRELT+V QKRF P SV LYAEKVATRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 103 bits (247), Expect = 5e-22
Identities = 50/58 (86%), Positives = 52/58 (89%)
Frame = +3
Query: 432 MESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLRQXVLRI 605
MESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ VL I
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 58
>BC040232-1|AAH40232.1| 696|Homo sapiens CCDC88B protein protein.
Length = 696
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +1
Query: 139 WPRTATPAWKSGS---LPSARRSLLWPP 213
WP A P W SGS LP +RSL PP
Sbjct: 634 WPPRAAPGWSSGSSRWLPLRQRSLGDPP 661
>BC030194-1|AAH30194.1| 223|Homo sapiens CCDC88B protein protein.
Length = 223
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +1
Query: 139 WPRTATPAWKSGS---LPSARRSLLWPP 213
WP A P W SGS LP +RSL PP
Sbjct: 161 WPPRAAPGWSSGSSRWLPLRQRSLGDPP 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,744,811
Number of Sequences: 237096
Number of extensions: 1787088
Number of successful extensions: 7239
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7238
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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