Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_J20
         (551 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DN26 Cluster: Chromosome undetermined scaffold_57, wh...    33   3.3  
UniRef50_Q23AX3 Cluster: Hypothetical repeat containing protein;...    32   7.7  

>UniRef50_A0DN26 Cluster: Chromosome undetermined scaffold_57, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_57,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 697

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
 Frame = +3

Query: 15  IITQKNTLYYISSFHFFITN*LHI----LFSSSVLIVNDFRAFGISLYFNFIFREIYQ*L 182
           +IT  NT  +I  F     + +H+    L S +VL  N    +  +LY N ++ ++YQ L
Sbjct: 292 LITNPNTSRHIIKFKNISIDCIHLKNNRLTSPTVLFCNPNAFYYETLYHNSLWIKVYQDL 351

Query: 183 KLSFFL*YLVTFNNSTFLV*LPTNLLK 263
           K++  L     + +ST  V  PT L++
Sbjct: 352 KINLILWNYSEYGSSTGTV-SPTKLIE 377


>UniRef50_Q23AX3 Cluster: Hypothetical repeat containing protein; n=1;
            Tetrahymena thermophila SB210|Rep: Hypothetical repeat
            containing protein - Tetrahymena thermophila SB210
          Length = 3011

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = -1

Query: 224  VVKSN*VLQKKTKFKLLINFSEYKIKIKRNTKSSKIVXXXXXXXXKYVQLVS----YKEV 57
            VV++N +  ++TKF  +    EY +K  +N K+S++          Y+ ++S    Y++V
Sbjct: 2436 VVQANQIFIQQTKFLNIQRLKEYYLKSLQNEKNSEMTETLLKKQDYYLNIISDAKYYQQV 2495

Query: 56   KRGNII 39
            K   +I
Sbjct: 2496 KNSLVI 2501


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,039,185
Number of Sequences: 1657284
Number of extensions: 6315253
Number of successful extensions: 10750
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10748
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)