Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_J16
         (631 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0143 - 944169-947273                                             31   1.00 
02_01_0281 - 1879519-1879605,1880761-1880851,1881343-1881849,188...    30   1.7  
11_08_0084 + 28260647-28262575                                         29   4.0  
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464...    28   5.3  

>05_01_0143 - 944169-947273
          Length = 1034

 Score = 30.7 bits (66), Expect = 1.00
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = +1

Query: 202 DINLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAWTRVDTILEYSQNQETKYYALQ 375
           DI L+D +   + +A   +++  QDI   L+E+ + W +  T  +  Q  +TKY  LQ
Sbjct: 786 DIKLIDVVK--MENASPLEEKFRQDIDALLEENLEFWMKFSTSFQQIQGFQTKYEQLQ 841


>02_01_0281 -
           1879519-1879605,1880761-1880851,1881343-1881849,
           1881939-1882009,1882102-1882181,1882287-1882464
          Length = 337

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 157 LEQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRVAQDILTAL 291
           +E   SKL     K D+N LD +VG +  A      +A  IL ++
Sbjct: 187 MENTNSKLGKLGMKTDLNRLDKLVGAIMEAAPISSAIASRILVSV 231


>11_08_0084 + 28260647-28262575
          Length = 642

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 205 INLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAW 312
           ++L + ++ C  +   D +R A ++L  +K+H  AW
Sbjct: 261 VDLHNLLLHCAQAVATDDRRSAHELLRQIKQHSSAW 296


>02_05_0844 -
           32144417-32144764,32145588-32145686,32146218-32146410,
           32147049-32147107,32147189-32147263,32147557-32147670,
           32147776-32147895,32148204-32148216,32148421-32148512,
           32149078-32149164,32149254-32149328,32149630-32149680,
           32149852-32149947,32150135-32150221,32150312-32150368,
           32150475-32150600,32150709-32150949,32151028-32151114,
           32151260-32151637,32152847-32153187
          Length = 912

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +1

Query: 151 ATLEQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRV---AQDILTALKEHPDAWTRV 321
           A  E +AS   + N  +DI     I GC+       Q++   +++ L +   H D  T  
Sbjct: 728 AATEHEASNSGE-NSYIDIGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGHHSDPSTVP 786

Query: 322 DTILEYSQNQETKY 363
           DTIL+ S   E  +
Sbjct: 787 DTILQCSSGDEVSF 800


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,791,381
Number of Sequences: 37544
Number of extensions: 233726
Number of successful extensions: 556
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)