Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_J09
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 185 6e-48
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 91 2e-19
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 88 1e-18
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 87 3e-18
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 83 3e-17
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 79 5e-16
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 64 2e-11
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 62 7e-11
SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|c... 31 0.11
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 27 2.3
SPBC1773.13 |||aromatic aminotransferase |Schizosaccharomyces po... 26 4.1
SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyc... 25 7.2
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 25 7.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.2
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 25 7.2
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 25 9.5
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 185 bits (450), Expect = 6e-48
Identities = 88/186 (47%), Positives = 128/186 (68%)
Frame = +3
Query: 93 MALHVPKAPGVPQMLKDGARMFSGLEEAVYXNINACKQFAQSVRSAYGPNGMNKMIINHI 272
MAL VPKA G PQ+ ++G R+ G+E+AV N NA ++ ++ R++ GPNG NK+++NH+
Sbjct: 1 MALRVPKASG-PQLFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHL 59
Query: 273 DKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXR 452
+ F+T+DA TIIREL+V HPAAKL+V A+Q Q+ E+GD NFV+V +G R
Sbjct: 60 QQTFLTNDAATIIRELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIR 119
Query: 453 LGVTTSEIADGYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFIS 632
+G+T EIA GYE AL +E+L + ++I+ ++ KE+ K I I SKQYG+E F+S
Sbjct: 120 MGLTPLEIAKGYEMALSHTMEVLEEICADKIETVESEKELIKAIRTCISSKQYGNEDFLS 179
Query: 633 ELVTKA 650
+LV KA
Sbjct: 180 DLVAKA 185
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 90.6 bits (215), Expect = 2e-19
Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Frame = +3
Query: 171 EAVYXNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLM 350
+AV +I A K A VR++ GP G++K++I+ + VT+D TI+ +++VEH AKL+
Sbjct: 34 DAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLL 93
Query: 351 VLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALD---KCLEIL 521
V S+ QD E+GDGT V+VL+G G+ IADGYE+A K L+ +
Sbjct: 94 VQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAI 153
Query: 522 PSLICNEIKDTKNI-KEVTKGIVAAIMSKQYGH 617
++ ++T N+ + + + ++SK + H
Sbjct: 154 SDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDH 186
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 87.8 bits (208), Expect = 1e-18
Identities = 56/189 (29%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
Frame = +3
Query: 93 MALHVPKAPGVPQMLKDGARMFSGLEEAVYXNINACKQFAQSVRSAYGPNGMNKMIINHI 272
M+L P+ P + +LK+G G + + NINAC ++R+ GP G +K++++
Sbjct: 1 MSLGGPQIPVI--VLKEGTDDSQGRGQLL-SNINACVAVQDTIRTTLGPLGADKLMVDDR 57
Query: 273 DKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXR 452
+ +++D TI++ LD+ HPAAK +V ++ QDAEVGDGT V+V +G
Sbjct: 58 GEVVISNDGATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVE 117
Query: 453 LGVTTSEIADGYERALDKCLEILPSLICN-EIKDTKNIKE-VTKGIVAAIMSKQY-GHEQ 623
GV++ I GY +A + + + + ++ D +++ +TK A+ SK +
Sbjct: 118 DGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNST 177
Query: 624 FISELVTKA 650
F +++V A
Sbjct: 178 FFTKMVVDA 186
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 86.6 bits (205), Expect = 3e-18
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Frame = +3
Query: 111 KAPGVPQMLKDGARMFSGLEEAVYXNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVT 290
KA VP +D + +E NI A + A ++R++ GP GM+KMI + +T
Sbjct: 3 KAATVPVAFQDREKP----QEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILT 58
Query: 291 SDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTS 470
+D TI++ L V HPAAK++V S QD E GDGT V++L+G + G+ +
Sbjct: 59 NDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPT 118
Query: 471 EIADGYERALDKCLEIL-PSLICNEIKDTKN-IKEVTKGIVAAIMSKQYGH 617
IA+ ++RA ++ + + + E+ D ++ ++ T + + I+S QY +
Sbjct: 119 VIAESFQRAAGFTVDCMKENALAIELSDRESLLRAATTSLNSKIVS-QYSN 168
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 83.0 bits (196), Expect = 3e-17
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 1/181 (0%)
Frame = +3
Query: 111 KAPGVPQMLKDGARMFSGLEEAVYXNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVT 290
+AP + G ++ SG E+ N+ A A V+S+ GP G++KM+++ I VT
Sbjct: 3 QAPRESTLFLSGEKI-SG-EDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVT 60
Query: 291 SDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTS 470
+D TI+ LDVEHPA K++V +Q QD EVGDGT V++++ + + +
Sbjct: 61 NDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPT 120
Query: 471 EIADGYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHE-QFISELVTK 647
I GY A+ + ++ + ++ + D+ + + ++ SK G++ F S +
Sbjct: 121 TIITGYRLAIREAVKFMTDVLSCSV-DSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVD 179
Query: 648 A 650
A
Sbjct: 180 A 180
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 79.0 bits (186), Expect = 5e-16
Identities = 40/120 (33%), Positives = 65/120 (54%)
Frame = +3
Query: 171 EAVYXNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLM 350
+A NI A K A +R+ GP M KM+++ + +T+D I+RE++V HPAAK M
Sbjct: 19 KAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSM 78
Query: 351 VLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL 530
+ ++ QD EVGDGT VI+L+G + + +++AL+ L I+ +
Sbjct: 79 IELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEI 138
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 64.1 bits (149), Expect = 2e-11
Identities = 39/146 (26%), Positives = 69/146 (47%)
Frame = +3
Query: 171 EAVYXNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLM 350
+A+ NI+A ++S GP G KM+++ +T D ++ E+ +++P A +
Sbjct: 16 QALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCI 75
Query: 351 VLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL 530
A+ QD GDGT V +L G R G+ S I+DG+ A ++ L L S
Sbjct: 76 AKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSF 135
Query: 531 ICNEIKDTKNIKEVTKGIVAAIMSKQ 608
+ D + + V K ++ +S +
Sbjct: 136 KTDFEVDREVLLNVAKTSLSTKISSK 161
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 62.1 bits (144), Expect = 7e-11
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = +3
Query: 219 VRSAYGPNGMNKMIINHIDKQFV-TSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGT 395
V+S GP GM+K++ ++ V T+D TI++ + +++ AAK++V S++QD EVGDGT
Sbjct: 36 VKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDGT 95
Query: 396 NFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEIKDTKNIKEVT 575
V V + + I DGY A ++ L + + D +
Sbjct: 96 TSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRASSIDNSSDPAKFRSDL 155
Query: 576 KGIVAAIMSKQ 608
+ I +S +
Sbjct: 156 ENIARTTLSSK 166
>SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 137
Score = 31.5 bits (68), Expect = 0.11
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 232 YAERTLCANCLQALIFXYTASSNPENIRA 146
+AER C NC L F YT NP I A
Sbjct: 65 FAERIFCKNCGTTLYFAYTNGKNPYFINA 93
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 442 NYSAWE*LPVKLLMDMREHLTNVWKSFLLS 531
NYS WE + + L +R L N KSF+L+
Sbjct: 559 NYSLWEAVGISLNYIVRNGLINSHKSFVLT 588
>SPBC1773.13 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 481
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 540 EIKDTKNIK-EVTKGIVAAIMSKQYGHEQFISELV 641
E+ T NIK + ++G++ S QYG Q ISELV
Sbjct: 76 EVNVTFNIKADPSEGLLNFSQSLQYGQCQGISELV 110
>SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 517
Score = 25.4 bits (53), Expect = 7.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 306 WCQHHW*QIAYQY 268
W HHW Q+ YQ+
Sbjct: 421 WAVHHWKQMGYQF 433
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 559 FFVSFISLQMREGRISRHLSSALSYPSAISLVV 461
FF + + + R +RH++S L+YP +I ++
Sbjct: 120 FFYTRDFPKFQSSRTARHITSLLTYPMSIGAIL 152
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.2
Identities = 26/112 (23%), Positives = 52/112 (46%)
Frame = -1
Query: 574 VTSLMFFVSFISLQMREGRISRHLSSALSYPSAISLVVTPKRXXXXXXXXXAPDKTITKL 395
+T++ +S S+ +S LSS+ S PS+ SL ++ +
Sbjct: 557 ITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFS---------SAS 607
Query: 394 VPSPTSASCI*LASTISLAAGCSTSNSLMMVPASLVTNCLSI*LMIILFMPL 239
SP+S S +S+ L++ +++SLM+ +S+++ SI I +P+
Sbjct: 608 TSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPI 659
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1
Query: 391 PSPTSASCI*LASTISLAAGCSTSNSLMMVPASLVTNCLSI*LMIILFMPLGPYAERTLC 212
P PTSAS AS SL G N ++ +V + +++I+F L + +
Sbjct: 69 PEPTSASTPPSASASSLPNGAQKHNHTGVIAGPIVGVLGGLIVLVIIFYCLRHFKRKKFL 128
Query: 211 A 209
A
Sbjct: 129 A 129
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 361 LASTISLAAGCSTSNSLMMVPASLVTNCLSI*LMIILFMP 242
LAST + ST N L ++P+S N L I+ F P
Sbjct: 302 LASTTPTSNSHSTENPLAIIPSSTSKNLLPETPSIVRFNP 341
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,380,295
Number of Sequences: 5004
Number of extensions: 44313
Number of successful extensions: 116
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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