Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_J08
(651 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29837| Best HMM Match : MobC (HMM E-Value=6.8) 33 0.27
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_31639| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_915| Best HMM Match : GIY-YIG (HMM E-Value=0.67) 30 1.4
SB_35605| Best HMM Match : Treacle (HMM E-Value=0.54) 30 1.4
SB_5834| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_9582| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_3417| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 30 1.9
SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29) 30 1.9
SB_45818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 29 2.5
SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_35167| Best HMM Match : zf-HIT (HMM E-Value=0.046) 29 3.3
SB_47093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 29 4.3
SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2) 29 4.3
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 29 4.3
SB_28927| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_20649| Best HMM Match : SpoIIP (HMM E-Value=1.3) 29 4.3
SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14) 29 4.3
SB_28413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_25522| Best HMM Match : Saccharop_dh_N (HMM E-Value=3.9) 28 5.7
SB_22380| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_17583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_59036| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_58849| Best HMM Match : zf-piccolo (HMM E-Value=2.8) 28 5.7
SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_37768| Best HMM Match : SpoVG (HMM E-Value=7.9) 28 5.7
SB_37548| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08) 28 7.6
SB_51880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_50941| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06) 28 7.6
SB_13523| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_9586| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_54| Best HMM Match : Actin (HMM E-Value=0) 28 7.6
SB_37753| Best HMM Match : zf-C2H2 (HMM E-Value=0.0023) 28 7.6
SB_21276| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_29837| Best HMM Match : MobC (HMM E-Value=6.8)
Length = 327
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ + T ++ ++ H+ S T T N + +NKRLSTLSSDRK+
Sbjct: 30 NRNTYQLFTKPNAPLQYVHRESNNPLTITKNIPAS--INKRLSTLSSDRKT 78
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 31.5 bits (68), Expect = 0.62
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 314 NQDSTRRHHHQASQTDSTTTGNDLSCYHLNKR 409
++ ++H HQ + +T TGND + Y +NK+
Sbjct: 1031 DKQQIQQHQHQTTNAATTNTGNDSNSYVINKQ 1062
>SB_31639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +2
Query: 254 HHPYPQRQPQSHQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDR 433
H+ Q+QPQ Q Q +T A+ T +TTT N+ + H N + +
Sbjct: 71 HNNKQQQQPQQQQQQQPQQQQATTTTATTTTATTTTTTTTSNNNNSNHNNSNHNNNKQQQ 130
Query: 434 KSPRQK 451
+ +Q+
Sbjct: 131 QQQQQQ 136
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +2
Query: 269 QRQPQSHQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKR 409
Q+QPQ Q Q ++ Q T +TTT + H NK+
Sbjct: 29 QQQPQQQQQQQQQQQQPQQQQQQQPQQQATTTTTTTTSNNSNHNNKQ 75
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 254 HHPYPQRQPQSHQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYH 397
+HP P +H N+ H P NQ ST H ++ T N L+ H
Sbjct: 628 NHPSNVHTPDNHLNTVHTPDNQPST-VHTPDNQPSNVHTPDNHLNTVH 674
>SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S ST T N + +NKRLSTLSSD+++
Sbjct: 319 NRNTYQPFTKPNAPLQYVHRESNHPSTITKNIPAS--INKRLSTLSSDKET 367
>SB_915| Best HMM Match : GIY-YIG (HMM E-Value=0.67)
Length = 336
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N T ++ ++ H+ S T T N +S +NKRLSTLSSD+++
Sbjct: 28 NRNPYQPSTKPNAPLQYVHRESNLQPTITKN-ISA-SINKRLSTLSSDKET 76
>SB_35605| Best HMM Match : Treacle (HMM E-Value=0.54)
Length = 776
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 303 TSPQTRILRAVITTKRHRPIQPLLATIYPATT*TSDSVHCHQTARA 440
T+PQ R+VIT +RHRPI+ ++ P T +S + C + +A
Sbjct: 703 TTPQVANKRSVITRRRHRPIEG--SSSEPDTPASSCTSSCSKAIKA 746
>SB_5834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 299 QHVPTNQDSTR--RHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
QH+P + R ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 185 QHLPAFHQTERPIQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 231
>SB_9582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N +NKRLSTLSSD+K+
Sbjct: 142 NRNTYQPFTKPNAPLQYVHRESNNPLTITKNIPGS--INKRLSTLSSDKKT 190
>SB_3417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 249 NSIIHIHNDNHKATRTHNTSPQTRILRAVITTKRH 353
N + IHN N TRTHN + TR ++ T+ H
Sbjct: 99 NMVTRIHNHN-MVTRTHNHNMVTRAHNHIMVTRAH 132
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 234 RSGRCNSIIHIHNDNHKATRTHNTSPQTRILRAVITTKRHRPI 362
R+ N + HN N TR HN + TRI ++ T+ H I
Sbjct: 220 RTHNHNMVTRTHNHN-MVTRAHNHNMVTRIHNHIMVTRIHNHI 261
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 234 RSGRCNSIIHIHNDNHKATRTHNTSPQTRILRAVITTKRH 353
R+ N + IHN N TRTHN + TR + T+ H
Sbjct: 202 RAHNHNMVTRIHNHN-MVTRTHNHNMVTRTHNHNMVTRAH 240
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 338 HHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKSPRQKPHCFPSIKNRSSLWLNQ 502
++++S+ DS + G+ + ++ S SS R SPR P PSI R + + Q
Sbjct: 241 YNRSSKYDSQSGGSQRTTPAVSPYQSPSSSARSSPRGSPTASPSISRRRAKFQQQ 295
>SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29)
Length = 594
Score = 29.9 bits (64), Expect = 1.9
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +3
Query: 108 TNIPDN*-RSNFGARSQTASSAF-RLLPPGGHADH--SSP--HGPDG-LRSGRCNSIIHI 266
T+ PD+ + + ++S+ +S F PPG H H S P H P + G CN
Sbjct: 77 TSAPDHGTQESKSSKSKHSSGHFCSTCPPGPHTHHVYSPPNCHPPATFVEHGHCNCQPTA 136
Query: 267 HNDNHKATRTHNTSPQTRILRAVI--TTKRHRPIQP 368
+ DNH H+ S Q R + V RP+QP
Sbjct: 137 YLDNHYHYAHHSQSAQPRPVAVVAHPPPLLLRPLQP 172
>SB_45818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKSPRQKPHCF- 463
H + P S RR Q +++ TTG C L TLSS +S +K C
Sbjct: 63 HSRRKKRPEKTRSFRRTTGQKTRSFRRTTGQKTRCSRRRSDLKTLSSRLRS-GEKTRCSR 121
Query: 464 --PSIKNRSSLWLNQDLNTKIFCRHT 535
+K RSS L D T+ R T
Sbjct: 122 RRSDLKTRSSR-LRSDEKTRCSRRRT 146
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 275 QPQSHQNSQHVPTNQDSTRRHH-HQASQTDSTT--TGNDLSCYHLNKRLSTLSSDRKSPR 445
Q HQ QH + RHH H++S STT +G S + R + L S R
Sbjct: 426 QTSKHQQDQHHHHHHHHHHRHHKHRSSSGHSTTEASGRRASDHSHEMRATPLDS-RHGIA 484
Query: 446 QKPHCFPSIKNRSSL 490
P +P +N L
Sbjct: 485 AVPMKYPQTRNHRPL 499
>SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 356 TDSTTTGNDLSCYHLNKRLSTLSSDR--KSPRQKPHCFPSIKNRSSLWLNQDLNTKIFCR 529
+ T GN L LN +L LSS+R KS KPHC + S ++TK
Sbjct: 45 SSGTCNGNSLRV--LNAQLGILSSERVTKSTSAKPHCDTDVPAVPSGLAGLSMDTKGLSF 102
Query: 530 HTKSKSRAG 556
++ S AG
Sbjct: 103 NSIQHSDAG 111
>SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1925
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 254 HHPYPQRQPQSHQ--NSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSS 427
HH Q P + +Q +PT T+ H+Q QT + + +H + L+T +
Sbjct: 1451 HHHQTQSLPTTPNITKNQSLPTTPTITKHSHYQQHQTSPNPVITNNTHHHQTQSLTTTPN 1510
Query: 428 DRKSPRQKPH 457
K + H
Sbjct: 1511 ITKPSHYQQH 1520
>SB_35167| Best HMM Match : zf-HIT (HMM E-Value=0.046)
Length = 632
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 150 SQTASSAFRLLPPGGHADHSSPHGPDGLRSGRCNSIIHIHNDNHKATRTHNTS 308
S++ + A PGG + PH + +R GRC + ++ N A TH +
Sbjct: 284 SKSRTHAMVACYPGGGTGYK-PHVDNPIRDGRCITTLYYVNPEWNARNTHTVN 335
>SB_47093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 135 NRNTYQPFTKSNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 183
>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1360
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKSPRQ 448
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++ Q
Sbjct: 1265 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKETFNQ 1316
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 251 LHHPYPQRQPQSHQNSQHVPTNQDSTRRHHHQASQTDSTTTGN 379
L H P + + +S+ PT DS+RR + AS STT G+
Sbjct: 1001 LDHTKPPLRKTTSNDSK--PTEPDSSRRTYRAASMDASTTAGS 1041
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 147 RSQTASSAFRLLPPGGHADHSSPHGPDGLRSGRCNSIIHIHNDNHKATRTHNTSPQTRIL 326
RS + S+ L PP +AD+ + H L S + + D ++ HN SP +
Sbjct: 494 RSVSRRSSEVLSPPDMYADNLNSHRDRNLYSDQFRGRQEVFFDQYRTNCYHNDSPPDPLN 553
Query: 327 RA 332
RA
Sbjct: 554 RA 555
>SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2)
Length = 918
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 163 NRNTYQPFTKPNAPLQYVHRESNHQPTITKNIPAS--INKRLSTLSSDKET 211
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +2
Query: 395 HLNKRLSTLSSDRKS 439
H+NKRLSTLSSD+++
Sbjct: 1387 HINKRLSTLSSDKET 1401
>SB_28927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 83 NRNTYQPFTKPNAPLQYVHRESNHQPTITKNIPAS--INKRLSTLSSDKET 131
>SB_20649| Best HMM Match : SpoIIP (HMM E-Value=1.3)
Length = 466
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKSPRQ 448
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++ Q
Sbjct: 371 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKETFNQ 422
>SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14)
Length = 1217
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 924 NRNTYQPFTKPNAPLQYVHRESNHPPTVTKNIPAS--INKRLSTLSSDKET 972
>SB_28413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 83 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 131
>SB_25522| Best HMM Match : Saccharop_dh_N (HMM E-Value=3.9)
Length = 285
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 135 NRNTYQPFTKPNAPLQYVHRESSHPPTITKNIPAS--INKRLSTLSSDKET 183
>SB_22380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 261 HIHNDNHKATRTHNTSPQTRILRAVITTKRHRPIQPLLATIYPATT*TSDSVHCHQTARA 440
H+ H + H T+ + + +TT+RH IQ + T TT + H T R
Sbjct: 383 HVTTQCHVTIQRHVTTQRQVTTQRQVTTQRHVTIQRHVTTQRHVTTQRQVTTQRHVTTRR 442
Query: 441 Q 443
Q
Sbjct: 443 Q 443
>SB_17583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 37 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 85
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 159 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 207
>SB_59036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 30 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 78
>SB_58849| Best HMM Match : zf-piccolo (HMM E-Value=2.8)
Length = 243
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 154 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 202
>SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 30 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 78
>SB_37768| Best HMM Match : SpoVG (HMM E-Value=7.9)
Length = 163
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 83 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 131
>SB_37548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 83 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 131
>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
Length = 595
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 341 HQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKSPRQKPHCFPSIK 475
HQ Q ++T G ++SC ++ +++ +SDRK ++ + P+ K
Sbjct: 515 HQKFQREATRLGRNISC-NIGMSVNSQNSDRKGSTRQSNKTPTWK 558
>SB_51880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD ++
Sbjct: 32 NRNTYQPFTKPNAPLQYVHRESNHQPTITKNIPAS--INKRLSTLSSDEET 80
>SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N + +NKRLSTLSSD ++
Sbjct: 37 NRNTYQPFTKPNAPLQYVHRESNHQPTITKNIPAS--INKRLSTLSSDEET 85
>SB_50941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 183 PPGGHADHSSPHGP 224
PP GHADHS+ GP
Sbjct: 82 PPKGHADHSAKGGP 95
>SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06)
Length = 1826
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S T T N +S +NKRLSTLSS++++
Sbjct: 707 NRNTYQPFTKPNAPLQYVHRESNNPPTITKN-ISA-SINKRLSTLSSNKET 755
>SB_13523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T ++ ++ H+ S +T T N + +NKRLSTLS+D+++
Sbjct: 50 NRNTYQSFTKPNAPLQYVHRESNHPTTITKNIPAS--INKRLSTLSADKET 98
>SB_9586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 287 HQNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
++N+ T + ++ H+ S T T N + +NKRLSTLSSD+++
Sbjct: 987 NRNTYQPFTKPSAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 1035
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +2
Query: 254 HHPYPQRQPQSH-QNSQHVPTNQDSTRRHHHQASQTDSTTTGNDLS---CYHLNK-RLST 418
H P+P S H+PT R+ Q S S ND + H N+ +++
Sbjct: 886 HPPHPGNSMGSACYPDYHLPTPPQKQRQTSGQTSVKVSLNILNDETNRPTEHPNQAKMNN 945
Query: 419 LSSDRKSPRQKPH 457
++D+KSP +PH
Sbjct: 946 PATDKKSPNPRPH 958
>SB_37753| Best HMM Match : zf-C2H2 (HMM E-Value=0.0023)
Length = 650
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 260 PYPQRQPQSHQNSQHVPTNQDSTRRHHHQASQTDSTTTGND 382
P +QP S + QH T+ H QAS + + D
Sbjct: 409 PSTSQQPSSSTSKQHASTSHQRASTSHQQASSSQQQASSVD 449
>SB_21276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 341 HQASQTDSTTTGNDLSCYHLNKRLSTLSSDRKS 439
H+ S T T N + +NKRLSTLSSD+K+
Sbjct: 78 HRESNHPPTITKNIPAS--INKRLSTLSSDKKT 108
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,316,394
Number of Sequences: 59808
Number of extensions: 456044
Number of successful extensions: 1763
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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