Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_J01
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0628 + 12365109-12365150,12366315-12366411,12366489-123665... 65 4e-11
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 33 0.15
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746... 32 0.35
01_03_0151 - 13229861-13230347,13230442-13230540,13230701-132309... 32 0.46
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 30 1.4
07_01_0914 - 7693305-7693513,7693613-7694111,7694716-7696316,769... 29 2.4
12_02_0937 - 24568475-24569145,24569215-24569319,24569419-245699... 29 3.2
05_05_0299 - 23930657-23932627 29 3.2
05_01_0414 + 3262886-3262957,3264517-3264597,3265115-3265214,326... 29 3.2
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 28 5.6
12_01_0492 + 3908154-3908678 27 9.9
06_03_0084 - 16386962-16387033,16387124-16387175,16387252-163873... 27 9.9
02_02_0581 + 11770511-11770527,11770754-11771612,11771652-117717... 27 9.9
01_07_0123 + 41206782-41206844,41207701-41207782,41208587-412087... 27 9.9
>02_02_0628 +
12365109-12365150,12366315-12366411,12366489-12366554,
12367884-12367963,12368051-12368125,12368232-12368381,
12369816-12369881,12370141-12370206,12370653-12370763,
12370917-12371003,12371087-12371193,12372141-12372255,
12372472-12372537,12373521-12373615,12373700-12373880
Length = 467
Score = 65.3 bits (152), Expect = 4e-11
Identities = 36/116 (31%), Positives = 67/116 (57%)
Frame = +2
Query: 296 IEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKXHTQRIADILAQLLQSEDSTEINVVTNSL 475
+EA FDL + +++A R QAI+ P+L K+ + +IADIL QLL SE++ E + V +L
Sbjct: 1 MEAMFDLVDMEELATRIQAIRGFPLLAKDAEF-VSKIADILGQLLASEENVERDAVHKAL 59
Query: 476 VTILKSDPKGALSGIFSQIHHNTXGELPNEIVTQRCIKFLSSKIXQLRTEISPNEA 643
+++++ D K +L +F + + + ++ I FL K+ ++ E+ +A
Sbjct: 60 MSLIRQDVKSSLQPLFKHVESGSE-------IREKVICFLKDKVFPVKAELLKPQA 108
>07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +2
Query: 230 KRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLC--KEHKXHTQR 403
+ A + + + S P + + IE + +D V++RK+AIK + LC + T+
Sbjct: 782 REAALELVGRHIASHPDVGLKYIEKVAERIKDTGVSVRKRAIKIIRDLCASNPNTDTTRA 841
Query: 404 IADILAQLLQSEDSTEINV-VTNSLV-TILKSDP 499
+I++++ E S ++ V VT +V + KS P
Sbjct: 842 FVEIISRVNDEESSVQLLVTVTWQIVFHVKKSKP 875
>01_06_0465 -
29573972-29574110,29574300-29574343,29574434-29574602,
29574707-29574894,29575081-29575145,29575257-29575311,
29575502-29575594,29576035-29576130,29576259-29576302,
29576419-29576431
Length = 301
Score = 32.3 bits (70), Expect = 0.35
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 122 KLYKNYDILAAAKDEISQHEKEYLEILAAVKGS--DKEKRLASQFIAKFFNSFPTLSEQA 295
K KN +ILA +EI + ++E L+ L +K D K +F FF++ P Q
Sbjct: 111 KAMKNNEILA---EEIHESDEEALKYLKDIKWCRIDDPKGFKFEF---FFDTNPFFKNQV 164
Query: 296 IEAQFDLCEDDDVAIRKQAI 355
+ + + ++DD I ++AI
Sbjct: 165 LTKTYHMIDEDDEPILEKAI 184
>01_03_0151 -
13229861-13230347,13230442-13230540,13230701-13230918,
13231210-13231317,13231366-13231518,13232962-13233015,
13233276-13233374,13234458-13234551,13234638-13234715,
13237696-13237766,13238321-13238416,13238505-13238582,
13238683-13238751,13238830-13238897,13239038-13239115,
13239190-13239289,13240002-13240061,13240488-13240579,
13241730-13241779,13241870-13241954,13242035-13242134,
13242933-13243013,13244827-13244907
Length = 832
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 404 IADILAQLLQSEDSTEINVVTNSLVTILKSDPKGALSGIFSQIHHNTXGELPNEIVT 574
+ DI++ +LQS+D ++ T+ L+ L DP S I Q ++ G L +VT
Sbjct: 377 VFDIISDVLQSQDRKIVSAGTDVLILFLNQDPNLLRSYIVQQEGNSLLGLLVKGMVT 433
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/68 (20%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +2
Query: 290 QAIEAQFDLCEDDDVAIRKQAI-KDLPVLCKEHKXHTQRI--ADILAQLLQSEDSTEINV 460
+++EA+ ++D +++++Q++ +L + +EHK H +RI +L ++ E + E++
Sbjct: 974 ESLEAKLSSLQED-ISLKEQSLLSELENIFQEHKEHEERIDRVHLLLNKIEKEKTVELSN 1032
Query: 461 VTNSLVTI 484
+ ++++
Sbjct: 1033 LEREVISL 1040
>07_01_0914 -
7693305-7693513,7693613-7694111,7694716-7696316,
7696509-7696530
Length = 776
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 512 SGIFSQIHHNTXGELPNEIVTQRCIKFLSSKIXQLRTEISPNE 640
SG F H L + +T R ++L + QLR EISPN+
Sbjct: 139 SGTFDVPRHTAT--LAQQFITSRTKRWLEDQPMQLRLEISPND 179
>12_02_0937 -
24568475-24569145,24569215-24569319,24569419-24569991,
24570480-24570780,24570867-24572039,24572260-24572328
Length = 963
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 512 SGIFSQIHHNTXGELPNEIVTQRCIKFLSSKIXQLRTEISPNE 640
SG F H L + +T R ++L + QLR EISPN+
Sbjct: 129 SGTFDVPRHTAT--LAQKFITSRTKRWLEDQPMQLRLEISPND 169
>05_05_0299 - 23930657-23932627
Length = 656
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 158 KDEISQHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTL 283
K++ + +KE +IL + G D+E S+F+ KFF P L
Sbjct: 227 KEDDDEEKKETEQILIDIFGKDEELDENSKFLKKFFLERPYL 268
>05_01_0414 +
3262886-3262957,3264517-3264597,3265115-3265214,
3265473-3265522,3265581-3265671,3266636-3266715,
3266940-3267005,3267761-3267860,3267934-3268011,
3268165-3268232,3268305-3268373,3268485-3268562,
3269561-3269631,3270632-3270709,3270808-3270913,
3271475-3271579,3272256-3272387,3272464-3272571,
3272655-3272764,3272868-3272963,3273155-3273617
Length = 733
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 395 TQRIADILAQLLQSEDSTEINVVTNSLVTILKSDP 499
++ + DI++ +LQS+D ++ T+ LV L DP
Sbjct: 339 SEGVFDIMSDVLQSQDKVLVSAGTDILVYFLNQDP 373
>05_05_0136 -
22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 275 PTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKE-HKXHTQRIAD---ILAQLLQSED 442
P L I A + +I++ A+ CK+ K +Q + D +L LLQSED
Sbjct: 238 PCLQAGMITAVLTYIDFFSASIQRVAVSAAANACKKVPKDCSQFVMDSVPVLCNLLQSED 297
Query: 443 STEINVVTNSLVTILKS 493
+ V + L+ I+ S
Sbjct: 298 KMVVEKVASCLINIVDS 314
>12_01_0492 + 3908154-3908678
Length = 174
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 135 FLYNFXILSPAIFLCPLTF 79
FL+ F +L A FLCPL F
Sbjct: 49 FLFFFFVLGSASFLCPLRF 67
>06_03_0084 -
16386962-16387033,16387124-16387175,16387252-16387313,
16387509-16387543,16387637-16387679,16388610-16388692,
16388829-16388917,16390415-16390681,16391370-16391446,
16391546-16391677,16391802-16391870,16392464-16392529,
16392603-16392773,16392848-16392916,16393005-16393086,
16393175-16393219,16393535-16393659,16394271-16394525,
16396561-16396722
Length = 651
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 266 NSFPTLSEQAIEAQFDLCEDDD 331
+SFP+ +A+++ FD+C DDD
Sbjct: 407 SSFPSRPLEALKSCFDVCGDDD 428
>02_02_0581 +
11770511-11770527,11770754-11771612,11771652-11771749,
11772903-11773631,11775159-11775231,11775698-11776066,
11777009-11777038
Length = 724
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 92 HKKMAGDNIXKLYKNYDILAAAKDEISQHEKEYLEILAAVKGSDK 226
HKK+ GDN+ K + K EI+ K Y A V G+DK
Sbjct: 187 HKKLKGDNLLKKLFRREKDMCYKKEITDFLKSYRN--AIVHGTDK 229
>01_07_0123 +
41206782-41206844,41207701-41207782,41208587-41208717,
41208758-41209147
Length = 221
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -3
Query: 319 AQVKLGFYCLFG*SRKTVKKLRNELRCQTFLFVRSLYGCEYFQVLFLV 176
A KLG + G SR T+KK +N R + + + Y Q+LF++
Sbjct: 70 AMQKLGMKTITGVSRVTIKKSKNAHRIVIYHCILLNFSLHY-QILFVI 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,346,256
Number of Sequences: 37544
Number of extensions: 261360
Number of successful extensions: 711
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -