Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_J01
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia t... 29 2.9
Z81459-1|CAB03827.3| 731|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z79604-6|CAB97241.2| 731|Caenorhabditis elegans Hypothetical pr... 28 5.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.0
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 28 6.7
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 173 QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 349
QH ++Y ++A ++ + E +A+ + F SFP + I + LC++ D+V I +
Sbjct: 4013 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4071
Query: 350 A 352
A
Sbjct: 4072 A 4072
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 173 QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 349
QH ++Y ++A ++ + E +A+ + F SFP + I + LC++ D+V I +
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060
Query: 350 A 352
A
Sbjct: 4061 A 4061
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 173 QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 349
QH ++Y ++A ++ + E +A+ + F SFP + I + LC++ D+V I +
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060
Query: 350 A 352
A
Sbjct: 4061 A 4061
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 173 QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 349
QH ++Y ++A ++ + E +A+ + F SFP + I + LC++ D+V I +
Sbjct: 4013 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4071
Query: 350 A 352
A
Sbjct: 4072 A 4072
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 173 QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 349
QH ++Y ++A ++ + E +A+ + F SFP + I + LC++ D+V I +
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060
Query: 350 A 352
A
Sbjct: 4061 A 4061
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 173 QHEKEYLEILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCED-DDVAIRKQ 349
QH ++Y ++A ++ + E +A+ + F SFP + I + LC++ D+V I +
Sbjct: 4002 QHARKY-RLIARIRHAGDEDEVAAHKLHPVFYSFPAVQYSGILEKTALCKEVDEVPIGRF 4060
Query: 350 A 352
A
Sbjct: 4061 A 4061
>AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia
telangectasia mutated)family protein 1 protein.
Length = 649
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +2
Query: 224 KEKRLASQFIAKFFNSFPTLSEQAIEAQFD--LC----EDDDVAIRKQAIKDLPVLCKEH 385
KE + + K NS + + +A+ + FD LC EDDD AIR ++ P++ +
Sbjct: 76 KEHQFEKNDLEKVDNSLNSAARKAVSSGFDALLCISQLEDDDEAIRASSLIIFPLIDVIY 135
Query: 386 KXHT 397
K T
Sbjct: 136 KYET 139
>Z81459-1|CAB03827.3| 731|Caenorhabditis elegans Hypothetical
protein C03H12.1 protein.
Length = 731
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Frame = +3
Query: 504 ELCLVSSH-KFITTXMVNYQMKLLHKDVSSFYL------LKFXNYEQKYHQTKL 644
+L LVSS K +TT + M+ +HKD+ F ++F N +++H T+L
Sbjct: 318 DLVLVSSELKLLTTHYKGWVMENVHKDLVKFSQEAAMKNVEFLNLGRRFHSTQL 371
>Z79604-6|CAB97241.2| 731|Caenorhabditis elegans Hypothetical
protein C03H12.1 protein.
Length = 731
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Frame = +3
Query: 504 ELCLVSSH-KFITTXMVNYQMKLLHKDVSSFYL------LKFXNYEQKYHQTKL 644
+L LVSS K +TT + M+ +HKD+ F ++F N +++H T+L
Sbjct: 318 DLVLVSSELKLLTTHYKGWVMENVHKDLVKFSQEAAMKNVEFLNLGRRFHSTQL 371
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +2
Query: 197 ILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLC 376
I + + +R + F +KF + L +E + +L +DD K KD +
Sbjct: 13858 ISSKTSSEGRRRRRRTGFASKFASDTLALRGDNVEIEAELLAEDDTVTWKVNGKDADLNS 13917
Query: 377 KEHK-XHTQRIADILAQLLQSEDSTEINVV--TNSLVTILK 490
+ H+ HT I+ ++ ++ EI T S TILK
Sbjct: 13918 RCHEMSHTFFRTLIIDEVEPTDSGMEITATCGTESHTTILK 13958
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +2
Query: 197 ILAAVKGSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAIKDLPVLC 376
I + + +R + F +KF + L +E + +L +DD K KD +
Sbjct: 13858 ISSKTSSEGRRRRRRTGFASKFASDTLALRGDNVEIEAELLAEDDTVTWKVNGKDADLNS 13917
Query: 377 KEHK-XHTQRIADILAQLLQSEDSTEINVV--TNSLVTILK 490
+ H+ HT I+ ++ ++ EI T S TILK
Sbjct: 13918 RCHEMSHTFFRTLIIDEVEPTDSGMEITATCGTESHTTILK 13958
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 92 HKKMAGDNIX--KLYKNYDILAAAKDEISQHEKEY 190
H+K A +N+ KLYK + L A D+IS +E+ +
Sbjct: 827 HRKNAIENLLTKKLYKTKESLTARVDDISDNERRH 861
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,480,163
Number of Sequences: 27780
Number of extensions: 269580
Number of successful extensions: 648
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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