Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_I23
         (353 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   1.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   1.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   6.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   6.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   6.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = -2

Query: 175 PSPVTPLSVISNSVSCAHPY 116
           PSP T  SV S SVS A PY
Sbjct: 702 PSPST--SVASPSVSVASPY 719


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = -2

Query: 175 PSPVTPLSVISNSVSCAHPY 116
           PSP T  SV S SVS A PY
Sbjct: 594 PSPST--SVASPSVSVASPY 611


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 79  WPICALIINVLWADILN 29
           WP  A +  VLW++  N
Sbjct: 536 WPRAAALGEVLWSEPTN 552


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 101 PFLSWVRMRTGNTIRY 148
           PF++   ++ GNT RY
Sbjct: 216 PFVTQCPIQQGNTFRY 231


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 101 PFLSWVRMRTGNTIRY 148
           PF++   ++ GNT RY
Sbjct: 216 PFVTQCPIQQGNTFRY 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,671
Number of Sequences: 336
Number of extensions: 889
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)