Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_I23
         (353 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944           56   6e-09
02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254     56   6e-09
02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907     56   6e-09
01_05_0120 - 18349131-18349880,18349972-18350259,18350383-18350568     30   0.45 
07_01_1026 - 8865924-8866225,8867051-8867297,8867561-8867587           30   0.60 
07_03_0054 + 12848425-12848593,12850106-12850278                       27   5.6  
01_03_0025 + 11739930-11740493,11740820-11741020,11741143-117412...    27   5.6  
10_08_0262 + 16307003-16308416,16309501-16309595,16309954-163099...    26   9.8  
01_06_0916 + 32950575-32950656,32952061-32952272,32952408-329524...    26   9.8  

>06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944
          Length = 51

 Score = 56.4 bits (130), Expect = 6e-09
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = +2

Query: 101 PFLSWVRMRTGNTIRYNAKRRHWRRTKL 184
           P   W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 22  PIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254
          Length = 51

 Score = 56.4 bits (130), Expect = 6e-09
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = +2

Query: 101 PFLSWVRMRTGNTIRYNAKRRHWRRTKL 184
           P   W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 22  PIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907
          Length = 51

 Score = 56.4 bits (130), Expect = 6e-09
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = +2

Query: 101 PFLSWVRMRTGNTIRYNAKRRHWRRTKL 184
           P   W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 22  PIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>01_05_0120 - 18349131-18349880,18349972-18350259,18350383-18350568
          Length = 407

 Score = 30.3 bits (65), Expect = 0.45
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +3

Query: 57  IINAQIGQKAETKQTHSSAG*GCAQETLFDITLRGVTGEGQSSSCKLV 200
           +  A   +K+E K   S+ G   A  T+FDIT  G   +G++ S K V
Sbjct: 18  VYGAAYAKKSEAKVA-SAPGLAAAVNTVFDITELGAVADGKTDSTKAV 64


>07_01_1026 - 8865924-8866225,8867051-8867297,8867561-8867587
          Length = 191

 Score = 29.9 bits (64), Expect = 0.60
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 115 PAEEWVCFVSAFWPICALIINVLWADILNNQ 23
           P EEW   V+A WP+ A++I   W  IL+ Q
Sbjct: 164 PEEEWSMVVAAGWPVNAILI---WFKILDPQ 191


>07_03_0054 + 12848425-12848593,12850106-12850278
          Length = 113

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 211 FNTFTSLQLELCPSPVTPLSVISNSVSCA 125
           F T+ S+  +L PSP + L V   S+SC+
Sbjct: 8   FTTYVSIVPDLRPSPRSHLCVNHGSISCS 36


>01_03_0025 +
           11739930-11740493,11740820-11741020,11741143-11741235,
           11741355-11742125
          Length = 542

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 110 SWVRMRTGNTIRYNAKRRHWRRTKLKL 190
           S ++ R    +R +  RRHWRR  L L
Sbjct: 73  SSIKARNSPLLRVSPFRRHWRRLSLSL 99


>10_08_0262 +
           16307003-16308416,16309501-16309595,16309954-16309959,
           16310567-16310671
          Length = 539

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 98  DPFLSWVRMRTGNTIRYNAKRRHWRRTKLKL 190
           DPFL W+R R    ++       W+ T  ++
Sbjct: 309 DPFLEWLRRRECKDLKRTLVHGRWKATTWRM 339


>01_06_0916 +
           32950575-32950656,32952061-32952272,32952408-32952448,
           32952916-32952959,32953259-32953561,32954145-32954302,
           32954849-32954965,32955562-32955747,32955872-32956031,
           32956079-32956151,32958613-32958889,32959024-32959099,
           32960653-32960720,32961270-32961361,32961505-32961578,
           32961777-32961820,32962155-32962206,32962585-32962704,
           32962777-32962889,32963023-32963110,32963492-32963577,
           32964172-32964258,32964491-32964594,32964996-32965098,
           32965250-32965345,32965456-32965645,32965777-32965838,
           32966014-32966118,32966782-32966983,32967092-32967300,
           32968510-32968673,32968799-32968850,32968935-32969021,
           32969319-32969441,32969567-32969605,32969606-32969860
          Length = 1447

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 166 VTPLSVISNSVSCAHPYPAEEWV 98
           V P+S ++++VS    +P EEW+
Sbjct: 837 VHPISYVTDTVSTMRLFPPEEWL 859


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,810,711
Number of Sequences: 37544
Number of extensions: 94332
Number of successful extensions: 216
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)