Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_I12
(627 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 71 5e-13
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 71 8e-13
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 68 6e-12
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 68 6e-12
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 66 1e-11
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 64 7e-11
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 64 1e-10
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 64 1e-10
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 62 2e-10
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 62 4e-10
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 61 5e-10
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 61 7e-10
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 61 7e-10
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 58 5e-09
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 58 5e-09
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 54 6e-08
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 53 1e-07
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 51 5e-07
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 50 1e-06
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 48 4e-06
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 48 7e-06
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 47 1e-05
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 46 3e-05
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 46 3e-05
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 45 5e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 45 5e-05
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 44 1e-04
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 44 1e-04
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 43 1e-04
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 42 3e-04
At5g61340.1 68418.m07697 expressed protein 42 4e-04
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 42 4e-04
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 41 8e-04
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 41 8e-04
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 40 0.001
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 40 0.001
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 40 0.002
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 39 0.003
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 38 0.005
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 38 0.007
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 38 0.007
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 38 0.007
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 38 0.007
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 37 0.010
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 37 0.013
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 37 0.013
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 36 0.022
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 36 0.029
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 36 0.029
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 34 0.067
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 33 0.12
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 33 0.12
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 32 0.27
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 32 0.27
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 32 0.27
At3g03860.1 68416.m00398 expressed protein 32 0.36
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 32 0.36
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 29 2.5
At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase, pu... 28 4.4
At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase, pu... 28 4.4
At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase, pu... 28 4.4
At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /... 28 4.4
At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /... 28 4.4
At4g31240.2 68417.m04435 expressed protein 28 5.8
At4g31240.1 68417.m04434 expressed protein 28 5.8
At4g02330.1 68417.m00317 pectinesterase family protein contains ... 27 7.7
At1g78740.1 68414.m09177 hypothetical protein 27 7.7
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 27 7.7
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +3
Query: 60 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 239
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A +
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
Query: 240 XXXASEYNINSMPTFVFVKNGKKLDEFSGAN 332
A E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 72 QSVAKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 70.5 bits (165), Expect = 8e-13
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +3
Query: 12 PALEIRAFV*KPKMSIHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEI 185
P EI F + IK+ + K+RL D KL+VI+F A WCGPCK + PKL+E+
Sbjct: 25 PRPEIYPFKVNSPCIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEEL 84
Query: 186 AAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 338
AA+ E+N++++P VF+K G+++D G VD
Sbjct: 85 AAKYTDVEFVKIDVDVLMSVW-MEFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +3
Query: 51 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 230
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A +
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDID 332
Query: 231 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 332
AS +NI+S+PTF F+++GK++D+ GA+
Sbjct: 333 KANDVAAS-WNISSVPTFCFIRDGKEVDKVVGAD 365
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 67.7 bits (158), Expect = 6e-12
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +3
Query: 93 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 272
L + DK V++DF ATWCGPC+++ P L+E++ + A++Y I +
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEA 130
Query: 273 MPTFVFVKNGKKLDEFSGA 329
+PTF+ K+GK D F GA
Sbjct: 131 LPTFILFKDGKLWDRFEGA 149
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +3
Query: 108 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 287
+KL+V+DF A+WCGPC+MI P + + A+ A E+N+ +MPTFV
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAM-ADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFV 105
Query: 288 FVKNGKKLDEFSGANVD 338
VK GK+++ GA D
Sbjct: 106 LVKRGKEIERIIGAKKD 122
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 64.1 bits (149), Expect = 7e-11
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = +3
Query: 57 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 236
I K+S D K A+ K+VV +F ATWCGPCK++ P E+ +E
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIEL-SEKHSSLMFLLVDVDE 86
Query: 237 XXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 332
+S ++I + PTF F+KNG+++ + GAN
Sbjct: 87 LSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/96 (33%), Positives = 52/96 (54%)
Frame = +3
Query: 51 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 230
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDT 67
Query: 231 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGANVD 338
AS++ I +MPTF+F+K GK LD+ GA D
Sbjct: 68 DELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKD 103
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +3
Query: 108 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 287
DK V++D+ ATWCGPC+ + P L+E++ + A++Y I ++PTF+
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKYKIEALPTFI 140
Query: 288 FVKNGKKLDEFSGA 329
K+G+ D F GA
Sbjct: 141 LFKDGEPCDRFEGA 154
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/90 (33%), Positives = 43/90 (47%)
Frame = +3
Query: 69 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 248
D D + AGDK+VV+D WCGPCK+I PK E++ +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPL 143
Query: 249 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 338
A E I +PTF +K+ K + E +GA +
Sbjct: 144 AKELGIRVVPTFKILKDNKVVKEVTGAKYE 173
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +3
Query: 99 EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 278
+ +KL+VIDF A WCGPCK + P++ EIA++ A Y ++P
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASK-YSEAVFARVDVDRLMDVAGTYRAITLP 98
Query: 279 TFVFVKNGKKLDEFSGANVD 338
FVFVK G+++D GA D
Sbjct: 99 AFVFVKRGEEIDRVVGAKPD 118
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 61.3 bits (142), Expect = 5e-10
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = +3
Query: 84 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 263
K + A KL+VIDF A+WC PC+ I P E+A + A E+
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKF-TNVVFFKIDVDELQAVAQEFK 77
Query: 264 INSMPTFVFVKNGKKLDEFSGANVD 338
+ +MPTFVF+K G +D GA D
Sbjct: 78 VEAMPTFVFMKEGNIIDRVVGAAKD 102
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = +3
Query: 60 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 239
++ DS+ +T++ E+ D V+++F A WCGPC+MI P +D++A +
Sbjct: 90 NLSDSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDES 147
Query: 240 XXXASEYNINSMPTFVFVKNGKKLDEFSGA 329
A+ Y I S+PT + K G+K D GA
Sbjct: 148 PNTANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/90 (33%), Positives = 42/90 (46%)
Frame = +3
Query: 69 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 248
D D + AG+KLVV+D WCGPCK+I PK ++ +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPL 133
Query: 249 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 338
A E I +PTF +K+ K + E +GA D
Sbjct: 134 AKELGIRVVPTFKILKDNKVVKEVTGAKYD 163
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +3
Query: 84 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 263
K + A KL+VIDF ATWC PC+ I P ++ A+ A E+
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADL-AKKHLDVVFFKVDVDELNTVAEEFK 77
Query: 264 INSMPTFVFVKNGKKLDEFSGA 329
+ +MPTF+F+K G+ + GA
Sbjct: 78 VQAMPTFIFMKEGEIKETVVGA 99
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +3
Query: 72 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA 251
+D L D+ V +DF A WCGPCKMI P ++E+A +
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATP 139
Query: 252 SEYNINSMPTFVFVKNGKKLDEFSGA 329
+Y + S+PT + NG+K D GA
Sbjct: 140 GQYGVRSIPTIMIFVNGEKKDTIIGA 165
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 54.4 bits (125), Expect = 6e-08
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 296
VV+DF A WCGPCKMI P ++++A +Y + S+PT +
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFV 160
Query: 297 NGKKLDEFSGA 329
G+K D GA
Sbjct: 161 GGEKKDTIIGA 171
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 296
V+++F +WCGPC+M+ +DEIA + A EY I ++P + K
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFK 146
Query: 297 NGKKLDEFSG 326
NG+K + G
Sbjct: 147 NGEKRESIMG 156
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 51.2 bits (117), Expect = 5e-07
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 296
V+++F+ATWCGPCK+I P ++ ++ E +E+ + +P F+ K
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFK 149
Query: 297 NGKKL 311
+GK++
Sbjct: 150 DGKEV 154
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 45 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 194
P M I I ++ L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 48.4 bits (110), Expect = 4e-06
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 42 KPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXX 221
KP M + DL L AGDKLVV+DF + CG CK + PK+ +I AE
Sbjct: 92 KPNMK-SVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKI-AEKNPEVEFLQ 149
Query: 222 XXXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFSGAN 332
NI+ +P F F + ++ FS N
Sbjct: 150 VNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTN 187
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +3
Query: 96 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 275
A + K++V++F A+WC P K I P E+A+ + E+N+++
Sbjct: 58 ANSHGKILVVNFKASWCLPSKTILPIYQELAS-TYTSMIFVTIDVEELAEFSHEWNVDAT 116
Query: 276 PTFVFVKNGKKLDEFSGAN 332
PT VF+K+G+++D+ G +
Sbjct: 117 PTVVFLKDGRQMDKLVGGD 135
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 63 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 236
+K ++ +++A D + V F A WCGPC+ I P + E++ +
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPDVTTYKVDIDEG 148
Query: 237 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 335
S+ NI ++PT F K G K E GA+V
Sbjct: 149 GISNTISKLNITAVPTLHFFKGGSKKGEVVGADV 182
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 45 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 224
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 225 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 323
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 45 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 224
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVN 161
Query: 225 XXXXXXXXASEYNINSMPTFVFVKNGK-KLDEFS 323
S N+ +P F F + +L+ FS
Sbjct: 162 FDENKPMCKS-LNVRVLPFFHFYRGADGQLESFS 194
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +3
Query: 63 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 236
+K + + L++A D + V F A WCGPC++I P + E++ +
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPDVTTYKVDIDEG 113
Query: 237 XXXXA-SEYNINSMPTFVFVKNGKKLDEFSGANV 335
A + N++++PT F K G K E G +V
Sbjct: 114 GLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDV 147
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 63 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 242
I + +L L AGDKLVV+DF + CG CK + PK+ + AEM
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDVQFLQVNYEEHK 160
Query: 243 XXASEYNINSMPTFVFVKNGK-KLDEFSGAN 332
++ +P F F + + ++ FS N
Sbjct: 161 SMCYSLGVHVLPFFRFYRGSQGRVCSFSCTN 191
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 57 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 236
+ I+ ++ L L AGD+LVV+DF + CG CK + PK+ ++ AE
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQL-AETNPNVMFLKVNQEE 146
Query: 237 XXXXASEYNINSMPTFVFVKNGK-KLDEFS 323
N++ +P F F + + K+ FS
Sbjct: 147 LRTMCHGLNVHVLPFFKFYRGAEGKVCSFS 176
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 135 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 314
A WC PCK I P ++A+ ++E+N+ + PT VF+K+G+++D
Sbjct: 17 APWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEF-SNEWNVEATPTVVFLKDGRQMD 75
Query: 315 EFSGA 329
+ GA
Sbjct: 76 KLVGA 80
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 105 GDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 278
GD+ V ++DF ATWCGPC ++ +L+ +A E A + + +P
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYEFARDMQVRGLP 150
Query: 279 TFVFV 293
T F+
Sbjct: 151 TLFFI 155
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 296
+V F A WC P + +E+A AS+ + +MPTF+F+K
Sbjct: 27 IVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVDVDEVKEV-ASQLEVKAMPTFLFLK 85
Query: 297 NGKKLDEFSGANVD 338
+G +D+ GAN D
Sbjct: 86 DGNAMDKLVGANPD 99
>At5g61340.1 68418.m07697 expressed protein
Length = 326
Score = 41.5 bits (93), Expect = 4e-04
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = -2
Query: 503 KLISSN-SLQTLKTFFIHLLKTYTC-FFFLIPX*FPSAAAYNFSLYLLVFKDSCFEFVDV 330
KL+S+N S + F++ LLKTY C FFFL+ SA A F+L+ L + + E
Sbjct: 108 KLLSNNHSADSSSVFYLRLLKTYVCNFFFLL-----SANASAFALFFLAY--NTLEAFGF 160
Query: 329 SAREFVQFLAI 297
S+R F FL++
Sbjct: 161 SSRNFYTFLSL 171
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 281
+V++F A WCG C+ + P+ ++ A+E+ A+EY I PT
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPT 108
Query: 282 FVFVKN-GKKLDEFSG 326
++N GK + +++G
Sbjct: 109 LKILRNGGKSVQDYNG 124
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Frame = +3
Query: 42 KPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGPKLDEIA 188
K I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 361 KKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +3
Query: 114 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 293
+V+++F A WCG CK + P +++A + A +Y I PT
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAIDADAHQSAAQDYGIKGFPTIKVF 109
Query: 294 KNGKKLDEFSGA 329
GK ++ GA
Sbjct: 110 VPGKAPIDYQGA 121
Score = 33.9 bits (74), Expect = 0.089
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 42 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXX 215
+P S+ + S DDL ++L +++F A WCG CK + P+ A +
Sbjct: 160 EPSASVELNASNFDDLVIE----SNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKVKL 215
Query: 216 XXXXXXXXXXXASEYNINSMPTFV 287
S + + PT +
Sbjct: 216 GHVNCDVEQSIMSRFKVQGFPTIL 239
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 296
V++ F A WCGPC+ + P L+++ +E ++I+ +PT + K
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFK 289
Query: 297 NGKKLDEFSGAN 332
G+++ + +GA+
Sbjct: 290 GGEQMAKVTGAD 301
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 281
+V++F A WCG CK + P+ ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 282 F-VFVKNGKKLDEFSG 326
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 72 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 188
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 281
+V++F A WCG CK + P+ ++ A+ + A++Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 282 F-VFVKNGKKLDEFSG 326
+F GK + E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 72 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 188
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +3
Query: 114 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 293
+V+++F A WCG C+ + P +++A+ + + +Y + PT
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFPTIKVF 107
Query: 294 KNGKKLDEFSGA 329
GK ++ GA
Sbjct: 108 VPGKPPIDYQGA 119
Score = 35.9 bits (79), Expect = 0.022
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = +3
Query: 42 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXX 215
+P S+ + S D+L T E L +++F A WCG CK + P+ + A +
Sbjct: 161 EPSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKL 216
Query: 216 XXXXXXXXXXXASEYNINSMPTFVFVKNGK 305
S + + PT + + K
Sbjct: 217 GHVNCDAEQSIKSRFKVQGFPTILVFGSDK 246
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLD---EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 287
+ +DF A WCG CK + P+LD I A++ A + I++ PT +
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNADKYSRLARKIEIDAFPTLM 111
Query: 288 FVKNGKKLDEFSGANVD 338
+G ++ + D
Sbjct: 112 LYNHGVPMEYYGPRKAD 128
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 293
VVI +MA WC C + PKL+++AAE S + MPT
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLW 160
Query: 294 KNGKKLDEFSGAN 332
++G+K E G +
Sbjct: 161 RDGQKQAEVIGGH 173
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 108 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 284
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 285 VFVKNGK 305
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 30.7 bits (66), Expect = 0.83
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +3
Query: 111 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 290
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 291 VKNGKKLDE 317
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 108 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 284
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 285 VFVKNGK 305
+F +G+
Sbjct: 180 LFFVDGE 186
Score = 30.7 bits (66), Expect = 0.83
Identities = 15/69 (21%), Positives = 26/69 (37%)
Frame = +3
Query: 111 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 290
K V+++ A WCG C+ + P +++A + + PT +F
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILF 519
Query: 291 VKNGKKLDE 317
G K E
Sbjct: 520 FPAGNKTSE 528
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFVFV 293
++I++MA+WC C + PKL+++AAE NI+ MPT
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLW 180
Query: 294 KNGKKLDEFSGAN 332
K + +E G +
Sbjct: 181 KEDEMKEEVIGGH 193
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 117 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVK 296
VV+ F A+WC K + +A + + Y++ ++P FVF K
Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPRAHFFRVEAEEHPEI-SEAYSVAAVPYFVFFK 82
Query: 297 NGKKLDEFSGAN 332
+GK +D GA+
Sbjct: 83 DGKTVDTLEGAD 94
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 105 GDKLVVIDFMATWCGPCKMIGP---KLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 275
G KL+V+D CGPC + P KL +E + N+ +
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETVVFARMNGDENDSCMEFLKDMNVIEV 265
Query: 276 PTFVFVKNGKKLDEFSGA 329
PTF+F+++G+ + G+
Sbjct: 266 PTFLFIRDGEIRGRYVGS 283
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/73 (21%), Positives = 28/73 (38%)
Frame = +3
Query: 108 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 287
+ +++F A WCG C+ + P+ A E+ A +Y I PT
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATELKGLAALAKIDATEEGDLAQKYEIQGFPTVF 175
Query: 288 FVKNGKKLDEFSG 326
+G+ + G
Sbjct: 176 LFVDGEMRKTYEG 188
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 36.7 bits (81), Expect = 0.013
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 75 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXAS 254
DD+K+ + A VI++ A+WCG C I P +++ +
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFSKLKFVYADIDECPE---T 88
Query: 255 EYNINSMPTFVFVKNGKKLDEFSGA 329
+I PTF F ++G+K+DE GA
Sbjct: 89 TRHIRYTPTFQFYRDGEKVDEMFGA 113
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 35.9 bits (79), Expect = 0.022
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +3
Query: 51 MSIHIKD--SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXX 224
MS +KD S + L +G LV + F A+WC K + +A +
Sbjct: 1 MSGTVKDIVSKEELDNLRHSGAPLV-LHFWASWCDASKQMDQVFSHLATDFPRAHFFRVE 59
Query: 225 XXXXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 332
+ Y++ +P FVF K+GK +D GA+
Sbjct: 60 AEEHPEI-SEAYSVALVPYFVFFKDGKTVDTLEGAD 94
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 35.5 bits (78), Expect = 0.029
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 108 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 281
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 282 F-VFVKNGKKLDEFSG 326
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
Score = 34.7 bits (76), Expect = 0.051
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 108 DKLVVIDFMATWCGPCKMIGPKLDEIAA 191
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 35.5 bits (78), Expect = 0.029
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +3
Query: 108 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPT 281
+K V+++F A WCG CK + P +++A A +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 282 F-VFVKNGKKLDEFSG 326
F K+ K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
Score = 34.7 bits (76), Expect = 0.051
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 108 DKLVVIDFMATWCGPCKMIGPKLDEIAA 191
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 34.3 bits (75), Expect = 0.067
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 60 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEI 185
++ D K +++ K +++ F A WC PC+ PKL E+
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEV 388
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 111 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 197
K + + F A WCGPC+ P+L E+ E+
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +3
Query: 66 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIA-------AEMXXXXXXX 218
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 163
Query: 219 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 323
A I ++P F F KNG L+ F+
Sbjct: 164 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 198
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +3
Query: 66 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIA-------AEMXXXXXXX 218
K D+L + L ++ + LVV+DF T CG CK I ++ A +
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNV 150
Query: 219 XXXXXXXXXXASEYNINSMPTFVFVKNGKKLDEFS 323
A I ++P F F KNG L+ F+
Sbjct: 151 VDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 185
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 123 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 296
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 297 NGKKLDEFSG 326
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 123 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 296
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 297 NGKKLDEFSG 326
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 123 IDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVK 296
+ F WC CK +G +++ M A ++ I+S PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 297 NGKKLDEFSG 326
NG+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 69 DSDDLKTRLA-EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXX 245
D D L +A + G+ + + F A+WC + + PK D +++
Sbjct: 60 DGDSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFDMLSSMFPQIQHLAVEHSQALPS 119
Query: 246 XASEYNINSMPTFVFV 293
S Y I+S+P+ + V
Sbjct: 120 VFSRYGIHSLPSILMV 135
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 31.9 bits (69), Expect = 0.36
Identities = 17/82 (20%), Positives = 32/82 (39%)
Frame = +3
Query: 90 RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNIN 269
+L +++++ + + CGPC+ + P L+++ E A I
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAAGIM 495
Query: 270 SMPTFVFVKNGKKLDEFSGANV 335
P F KN + L SG +
Sbjct: 496 GTPCVQFFKNKEMLRTISGVKM 517
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 66 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMI 164
K D+L + L ++ + LVV+DF T CG CK I
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYI 125
>At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 277
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 548 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 456
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 60 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 90
>At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 548 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 456
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 65 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 95
>At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 548 QQNQYFLHSRGCKHKKLISSNSLQTLKTFFI 456
Q NQ FL+ + KL+ NS T+ TF++
Sbjct: 65 QSNQEFLYGKAEVQMKLVPGNSAGTVTTFYL 95
>At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 421 KKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 531
K K HV + + +KN++ N +N C + CK
Sbjct: 327 KGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 421 KKKKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 531
K K HV + + +KN++ N +N C + CK
Sbjct: 327 KGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 111 KLVVIDFMATWCGPCKMIGPKL 176
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 111 KLVVIDFMATWCGPCKMIGPKL 176
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g02330.1 68417.m00317 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 573
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 394 LRTTLVSIYLCLRIVVLSLSTLAPENSSS 308
L+ LV+++L L+ + ++ TL P NSSS
Sbjct: 4 LKLFLVTLFLSLQTLFIASQTLLPSNSSS 32
>At1g78740.1 68414.m09177 hypothetical protein
Length = 306
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 376 SIYLCLRIVVLSLSTLA-PENSSSFLPFLTKTNVG 275
+IY+C +V L LST+ P S LPFL +G
Sbjct: 94 TIYICESLVSLKLSTVTLPSVKSVSLPFLRVLKLG 128
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +3
Query: 105 GDKLVVIDFMATWCGPCKMIGPKLDEIAA---EMXXXXXXXXXXXXXXXXXASEYNINSM 275
G++ V++ A WC + P+ E A E+ ASE I
Sbjct: 93 GNEFVMVLGYAPWCARSAELMPRFAEAATALKEIGSSVLMAKIDGDRYSKIASELEIKGF 152
Query: 276 PTFVFVKNGKKLDEFSGANVD 338
PT + NG L G++ +
Sbjct: 153 PTLLLFVNGTSLTYNGGSSAE 173
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,071,991
Number of Sequences: 28952
Number of extensions: 215264
Number of successful extensions: 697
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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