Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_I11
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 87 1e-17
01_06_0917 + 32978306-32978434,32978570-32978645,32979324-329793... 69 4e-12
01_06_0916 + 32950575-32950656,32952061-32952272,32952408-329524... 65 4e-11
07_03_0959 - 22885750-22886001,22886073-22886195,22886343-228864... 58 5e-09
07_03_0960 - 22902279-22902530,22902604-22902726,22902855-229029... 56 2e-08
07_03_0961 - 22921761-22921850,22922204-22922338,22922409-229225... 55 4e-08
06_03_0810 - 24817268-24817350,24817547-24817697,24818441-248185... 35 0.065
01_06_0459 + 29538025-29538579,29539190-29539354,29539448-295395... 32 0.35
01_05_0343 + 21155237-21155496,21155596-21155842,21155939-211560... 31 0.61
03_02_0138 + 5837813-5838490,5839000-5839164,5839289-5839426,583... 29 4.3
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 28 5.6
03_06_0483 - 34226496-34226864,34227140-34227360,34227677-342279... 28 5.6
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 87.0 bits (206), Expect = 1e-17
Identities = 55/156 (35%), Positives = 75/156 (48%), Gaps = 23/156 (14%)
Frame = +3
Query: 255 IKSEADKKLYKTIRLXNGLTALLISDPS-RPAVTXXXXXXXXXXXXXXDXNSDPESDGGK 431
IKS +D + Y+ +RL NGL ALL+ DP P D E DG +
Sbjct: 15 IKSPSDHRSYRLLRLPNGLCALLVHDPEIYPDGYPDPHASKPHEDEDMGEEDDEEEDGDE 74
Query: 432 SVQSAT-SDHHGTTXRNDFDEX---------------------KLXACALCVGVGSYSDP 545
SD G +D E K A A+CVG+GS++DP
Sbjct: 75 DDDDEEYSDEEGEDDEDDEGEEDEEDGSEPKRRKEKGSSEPLVKKAAAAMCVGMGSFADP 134
Query: 546 AEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
+ QGLAHF+ HM+FMGS ++P ENE+D+++ K GG
Sbjct: 135 PKAQGLAHFLEHMLFMGSSEFPDENEYDSYLSKHGG 170
>01_06_0917 +
32978306-32978434,32978570-32978645,32979324-32979391,
32979868-32979959,32980121-32980194,32980372-32980415,
32980752-32980803,32981200-32981319,32981391-32981503,
32981674-32981761,32982144-32982229,32982832-32982918,
32983149-32983252,32983607-32983709,32983861-32983956,
32984067-32984256,32984352-32984413,32984560-32984664,
32985163-32985364,32985473-32985681,32986413-32986537,
32986644-32986695,32986772-32986858,32987125-32987247,
32987375-32987629
Length = 913
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +3
Query: 477 NDFDEXKLXACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
+D D K AC + VGVGS+SDP ++GLAHF+ HM+F SEKYP EN++ ++ + GG
Sbjct: 37 SDSDTDKAAAC-MEVGVGSFSDPEGLEGLAHFLEHMLFYASEKYPGENDYSKYMIEHGG 94
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 249 EPIKSEADKKLYKTIRLXNGLTALLISD 332
E I+S +DK+ Y+ + L N L LLISD
Sbjct: 11 EFIRSRSDKREYRRVVLPNALECLLISD 38
>01_06_0916 +
32950575-32950656,32952061-32952272,32952408-32952448,
32952916-32952959,32953259-32953561,32954145-32954302,
32954849-32954965,32955562-32955747,32955872-32956031,
32956079-32956151,32958613-32958889,32959024-32959099,
32960653-32960720,32961270-32961361,32961505-32961578,
32961777-32961820,32962155-32962206,32962585-32962704,
32962777-32962889,32963023-32963110,32963492-32963577,
32964172-32964258,32964491-32964594,32964996-32965098,
32965250-32965345,32965456-32965645,32965777-32965838,
32966014-32966118,32966782-32966983,32967092-32967300,
32968510-32968673,32968799-32968850,32968935-32969021,
32969319-32969441,32969567-32969605,32969606-32969860
Length = 1447
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = +3
Query: 477 NDFDEXKLXACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
+D + K AC + VGVGS+SDP ++GLAHF+ HM+F SEKYP E ++ +I + GG
Sbjct: 545 SDSETDKAAAC-MEVGVGSFSDPEGLEGLAHFLEHMLFYASEKYPGEQDYTKYITEHGG 602
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 249 EPIKSEADKKLYKTIRLXNGLTALLISD 332
E I++ +DK+ Y+ + L N L LLISD
Sbjct: 519 EFIRARSDKREYRRVVLPNALECLLISD 546
>07_03_0959 -
22885750-22886001,22886073-22886195,22886343-22886429,
22886504-22886555,22886701-22886825,22887002-22887213,
22887317-22887518,22887928-22888032,22889643-22889704,
22889998-22890187,22890260-22890355,22890442-22890544,
22891448-22891551,22893284-22893370,22894033-22894118,
22894397-22894489,22895615-22895777,22895899-22896011,
22896113-22896235,22897393-22897444,22897843-22897886,
22897975-22898048,22898133-22898224,22899374-22899441,
22900817-22900892,22900952-22901215
Length = 1015
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3
Query: 498 LXACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
L A ++ V VG + DP + GLAHF+ HM+F SEKYP E+++ +I + GG
Sbjct: 88 LAAASMNVSVGYFCDPERLPGLAHFLEHMLFYASEKYPVEDDYSKYIAEHGG 139
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 270 DKKLYKTIRLXNGLTALLISDPSRPAVT 353
DK+ Y+ + L N L LL+SDP V+
Sbjct: 46 DKRGYRRVVLPNALECLLVSDPDTDKVS 73
>07_03_0960 -
22902279-22902530,22902604-22902726,22902855-22902941,
22903017-22903068,22903197-22903321,22903476-22903684,
22903990-22904191,22906205-22906309,22907264-22907325,
22907625-22907814,22907887-22907982,22908069-22908171,
22909117-22909220,22910239-22910325,22911238-22911323,
22911410-22911502,22912586-22912673,22912786-22912898,
22912989-22913111,22914473-22914524,22915185-22915286,
22915539-22915582,22915667-22915740,22915825-22915916,
22916566-22916633,22918572-22918647,22918767-22918952
Length = 997
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +3
Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
A ++ V VG + DP ++GLAHF+ HM+F SEKYP E+ + +I + GG
Sbjct: 64 AASMNVSVGYFCDPEGLEGLAHFLEHMLFYASEKYPIEDSYSKYITEHGG 113
>07_03_0961 -
22921761-22921850,22922204-22922338,22922409-22922531,
22922621-22922707,22922780-22922831,22922939-22923063,
22923724-22923932,22924206-22924407,22924526-22924630,
22925353-22925414,22925755-22925944,22926017-22926112,
22926203-22926305,22927019-22927122,22927264-22927395,
22928257-22928343,22929121-22929206,22929291-22929383,
22932197-22932284,22932402-22932514,22932621-22932743,
22934153-22934204,22934365-22934408,22934498-22934571,
22934655-22934746,22935594-22935661,22937146-22937221,
22937323-22937679
Length = 1055
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +3
Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
A ++ V VG + DP + GLAHF+ HM+F SEKYP E+ + +I + GG
Sbjct: 121 AASMNVSVGYFCDPEGLPGLAHFLEHMLFYASEKYPIEDSYSKYIAEHGG 170
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 249 EPIKSEADKKLYKTIRLXNGLTALLISDP 335
E K DK+ Y+ + L N L L+ISDP
Sbjct: 87 EITKPRNDKRGYRRVVLPNALECLVISDP 115
>06_03_0810 -
24817268-24817350,24817547-24817697,24818441-24818542,
24818722-24818802,24818900-24819020,24819284-24819401,
24819514-24819637,24819898-24819963,24820117-24820407,
24820455-24820592,24820967-24821116,24821240-24821410,
24821543-24821746,24821880-24822104,24822461-24822595,
24822995-24823096,24823586-24823882,24823979-24824167,
24824581-24824628,24824872-24825070,24825501-24825730,
24826373-24826568,24826695-24826882
Length = 1202
Score = 34.7 bits (76), Expect = 0.065
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 519 VGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPK 614
V VGS + + QG+AH + H+ F+GS+K K
Sbjct: 212 VHVGSIDEEEDEQGIAHMIEHVAFLGSKKREK 243
>01_06_0459 +
29538025-29538579,29539190-29539354,29539448-29539585,
29539685-29539836,29539949-29540057,29540281-29540379,
29541051-29541116,29541208-29541315,29541428-29541553
Length = 505
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 495 KLXACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXG 650
++ + + V GS + G AHF+ HM F G+ + P N + I G
Sbjct: 77 RMASVGVWVDAGSRFELPGTNGTAHFLEHMAFKGTTRRPTANALEVEIENMG 128
>01_05_0343 +
21155237-21155496,21155596-21155842,21155939-21156064,
21156291-21156428,21156513-21156650,21156756-21157013,
21157404-21157541,21158023-21158092,21158267-21158480,
21158614-21158719,21159844-21160077,21160836-21161000,
21161083-21161232,21161308-21161399,21161631-21161712,
21161800-21161883,21161980-21162096,21162179-21162289,
21162698-21162892,21164495-21164575,21165671-21165720,
21165978-21165990,21166518-21166600,21166693-21166833,
21166879-21166936,21167023-21167072,21167474-21167582,
21167666-21167727,21168321-21168363
Length = 1204
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKY 608
A +L V VGS + + +G+AH V H+ F + +Y
Sbjct: 79 ALSLAVKVGSVVEEEDERGVAHIVEHLAFSATSRY 113
>03_02_0138 +
5837813-5838490,5839000-5839164,5839289-5839426,
5839496-5839647,5839754-5839862,5840551-5840649,
5840739-5840804,5840891-5840998,5841820-5841906
Length = 533
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 519 VGVGSYSDPAEIQGLAHFVXHMVFMGS 599
+ GS + + G+AHFV HM+F G+
Sbjct: 127 IDAGSRYETEDSAGVAHFVEHMLFKGT 153
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -2
Query: 263 RFNGFREHFNILFXMEHSHWPFRTVI*HLNFGFKFRCPLKTTSFGHGSKCVFDQYDS 93
+FNG E I+ +E + +P TV LN G + P+K F F+ +S
Sbjct: 260 KFNGAFEEKEIIQFVELNKFPLITVFTDLNSGKVYGSPIKLQVFTFAEAYDFEDLES 316
>03_06_0483 -
34226496-34226864,34227140-34227360,34227677-34227933,
34228388-34228483,34228660-34228805,34229774-34229977
Length = 430
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 561 IPVFLLGRCSCPHQHRGRKLXV 496
+P FL G+CSCP + R + V
Sbjct: 336 VPTFLGGKCSCPQCEKPRNISV 357
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,943,087
Number of Sequences: 37544
Number of extensions: 262954
Number of successful extensions: 550
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -