Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_I11
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016421-6|AAT92074.1|  984|Caenorhabditis elegans Hypothetical ...    59   3e-09
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ...    59   3e-09
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ...    59   3e-09
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ...    59   3e-09
Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical pr...    58   4e-09
Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical p...    58   4e-09
U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical pr...    58   4e-09
U55372-1|AAA98002.2|  816|Caenorhabditis elegans Hypothetical pr...    57   1e-08
U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical pr...    54   7e-08
U00048-11|AAB53833.1|  995|Caenorhabditis elegans Hypothetical p...    33   0.18 
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U21317-1|AAA62524.2|  627|Caenorhabditis elegans Na/h exchanger ...    27   8.8  
AF497824-1|AAM18102.1|  644|Caenorhabditis elegans putative Na-H...    27   8.8  

>AF016421-6|AAT92074.1|  984|Caenorhabditis elegans Hypothetical
           protein F44E7.4d protein.
          Length = 984

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 26/50 (52%), Positives = 32/50 (64%)
 Frame = +3

Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
           A AL V VG   DP E+ GLAHF  HM+F+G+ KYP ENE+  F+    G
Sbjct: 108 AAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAG 157



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = +3

Query: 102 LIKHTFAAMSKRSGFQRTPKFKPEIKVLNNRSK-RPVT-MFHXKENVEVLPEP--IKSEA 269
           + K TF++++     +R       ++++ N S   P+  M    +N+ +      +K   
Sbjct: 21  IAKRTFSSVNFSQILRRPQNSSLRLRLVRNISNSNPLPKMTEAGKNIVLKRHDLIVKGAQ 80

Query: 270 DKKLYKTIRLXNGLTALLISDPS 338
           D + Y+ + L NG+  LL+SDP+
Sbjct: 81  DAREYRGLELTNGIRVLLVSDPT 103


>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
           protein F44E7.4c protein.
          Length = 1008

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 26/50 (52%), Positives = 32/50 (64%)
 Frame = +3

Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
           A AL V VG   DP E+ GLAHF  HM+F+G+ KYP ENE+  F+    G
Sbjct: 49  AAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAG 98



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 255 IKSEADKKLYKTIRLXNGLTALLISDPS 338
           +K   D + Y+ + L NG+  LL+SDP+
Sbjct: 17  VKGAQDAREYRGLELTNGIRVLLVSDPT 44


>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
           protein F44E7.4a protein.
          Length = 1067

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 26/50 (52%), Positives = 32/50 (64%)
 Frame = +3

Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
           A AL V VG   DP E+ GLAHF  HM+F+G+ KYP ENE+  F+    G
Sbjct: 108 AAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAG 157



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = +3

Query: 102 LIKHTFAAMSKRSGFQRTPKFKPEIKVLNNRSK-RPVT-MFHXKENVEVLPEP--IKSEA 269
           + K TF++++     +R       ++++ N S   P+  M    +N+ +      +K   
Sbjct: 21  IAKRTFSSVNFSQILRRPQNSSLRLRLVRNISNSNPLPKMTEAGKNIVLKRHDLIVKGAQ 80

Query: 270 DKKLYKTIRLXNGLTALLISDPS 338
           D + Y+ + L NG+  LL+SDP+
Sbjct: 81  DAREYRGLELTNGIRVLLVSDPT 103


>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
           protein F44E7.4b protein.
          Length = 1051

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 26/50 (52%), Positives = 32/50 (64%)
 Frame = +3

Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
           A AL V VG   DP E+ GLAHF  HM+F+G+ KYP ENE+  F+    G
Sbjct: 108 AAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAG 157



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = +3

Query: 102 LIKHTFAAMSKRSGFQRTPKFKPEIKVLNNRSK-RPVT-MFHXKENVEVLPEP--IKSEA 269
           + K TF++++     +R       ++++ N S   P+  M    +N+ +      +K   
Sbjct: 21  IAKRTFSSVNFSQILRRPQNSSLRLRLVRNISNSNPLPKMTEAGKNIVLKRHDLIVKGAQ 80

Query: 270 DKKLYKTIRLXNGLTALLISDPS 338
           D + Y+ + L NG+  LL+SDP+
Sbjct: 81  DAREYRGLELTNGIRVLLVSDPT 103


>Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 26/50 (52%), Positives = 32/50 (64%)
 Frame = +3

Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
           A AL V VG   DP E+ GLAHF  HM+F+G+ KYP ENE+  F+    G
Sbjct: 49  AAALDVNVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYFKFLTAHAG 98



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 255 IKSEADKKLYKTIRLXNGLTALLISDPS 338
           +K   D++ Y+ + L NG+  LL+SDP+
Sbjct: 17  LKGAQDEREYRGLELTNGIRVLLVSDPT 44


>Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 26/50 (52%), Positives = 32/50 (64%)
 Frame = +3

Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
           A AL V VG   DP E+ GLAHF  HM+F+G+ KYP ENE+  F+    G
Sbjct: 49  AAALDVNVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYFKFLTAHAG 98



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 255 IKSEADKKLYKTIRLXNGLTALLISDPS 338
           +K   D++ Y+ + L NG+  LL+SDP+
Sbjct: 17  LKGAQDEREYRGLELTNGIRVLLVSDPT 44


>U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical
           protein C02G6.1 protein.
          Length = 980

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 26/50 (52%), Positives = 32/50 (64%)
 Frame = +3

Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
           A AL V VG   DP E+ GLAHF  HM+F+G+ KYP ENE+  F+    G
Sbjct: 49  AAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPTENEYSKFLTDNAG 98



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 255 IKSEADKKLYKTIRLXNGLTALLISDPS 338
           +K   D + Y+ + L NG+  LL+SDP+
Sbjct: 17  VKGAQDDREYRGLELTNGIRVLLVSDPT 44


>U55372-1|AAA98002.2|  816|Caenorhabditis elegans Hypothetical
           protein C02G6.2 protein.
          Length = 816

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 25/50 (50%), Positives = 31/50 (62%)
 Frame = +3

Query: 504 ACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
           A +L V  G   DP E+ GLAHF  HM+F+G+ KYP ENEF  F+    G
Sbjct: 49  AVSLAVKAGHLMDPWELPGLAHFCEHMLFLGTSKYPLENEFTKFLSDNAG 98



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 255 IKSEADKKLYKTIRLXNGLTALLISDPS 338
           +K   D++  + + L NGL  LL+SDP+
Sbjct: 17  VKGPQDERECRGLELTNGLRVLLVSDPT 44


>U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical
           protein C28F5.4 protein.
          Length = 856

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 24/53 (45%), Positives = 33/53 (62%)
 Frame = +3

Query: 495 KLXACALCVGVGSYSDPAEIQGLAHFVXHMVFMGSEKYPKENEFDAFIXKXGG 653
           ++ A AL V VG   DP E+ GLAHF  HM+F+G+ KYP E E+  ++    G
Sbjct: 47  RVSAVALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSEREYFKYLAANNG 99



 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 255 IKSEADKKLYKTIRLXNGLTALLISD 332
           +K   D K Y+ + L NGL  LL+SD
Sbjct: 18  VKGSQDTKKYRGLELTNGLRVLLVSD 43


>U00048-11|AAB53833.1|  995|Caenorhabditis elegans Hypothetical
           protein C05D11.1 protein.
          Length = 995

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 558 GLAHFVXHMVFMGSEKYPKENEFD 629
           GL H + H+VFMGS+KYP +   D
Sbjct: 57  GLPHTLEHLVFMGSKKYPFKGVLD 80


>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
            T25C12.3 protein.
          Length = 2103

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 180  VLNNRSKRPVTMFHXKENVEVLPEPIKSEADKKLYKTIRL-XNGLTALLISDPSRPA 347
            V++ RS   V +    +NV+ +   ++  +DK + K I +  N  T+ L+ + +RPA
Sbjct: 868  VVSTRSTMKVAVQKIADNVQAMTRDMQQASDKWINKWILIAVNSNTSYLLVNSARPA 924


>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
            T25C12.3 protein.
          Length = 2103

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 180  VLNNRSKRPVTMFHXKENVEVLPEPIKSEADKKLYKTIRL-XNGLTALLISDPSRPA 347
            V++ RS   V +    +NV+ +   ++  +DK + K I +  N  T+ L+ + +RPA
Sbjct: 868  VVSTRSTMKVAVQKIADNVQAMTRDMQQASDKWINKWILIAVNSNTSYLLVNSARPA 924


>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
            T25C12.3 protein.
          Length = 2103

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 180  VLNNRSKRPVTMFHXKENVEVLPEPIKSEADKKLYKTIRL-XNGLTALLISDPSRPA 347
            V++ RS   V +    +NV+ +   ++  +DK + K I +  N  T+ L+ + +RPA
Sbjct: 868  VVSTRSTMKVAVQKIADNVQAMTRDMQQASDKWINKWILIAVNSNTSYLLVNSARPA 924


>U21317-1|AAA62524.2|  627|Caenorhabditis elegans Na/h exchanger
           protein 2 protein.
          Length = 627

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +3

Query: 63  IHSKNF*ASCRVVLIKHTFAAMSKRSGFQRTPKFKPEIKVLNNRSKRPV 209
           +HSKN        LI  T A M   +GF+     +     LNN   RP+
Sbjct: 447 VHSKNMIEHIYSELIDTTMAGMEDIAGFKGHHWIRDSWNALNNNYLRPI 495


>AF497824-1|AAM18102.1|  644|Caenorhabditis elegans putative Na-H
           exchanger isoform 2 protein.
          Length = 644

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +3

Query: 63  IHSKNF*ASCRVVLIKHTFAAMSKRSGFQRTPKFKPEIKVLNNRSKRPV 209
           +HSKN        LI  T A M   +GF+     +     LNN   RP+
Sbjct: 464 VHSKNMIEHIYSELIDTTMAGMEDIAGFKGHHWIRDSWNALNNNYLRPI 512


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,150,142
Number of Sequences: 27780
Number of extensions: 242916
Number of successful extensions: 540
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)