Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_I09
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0332 + 16880184-16881017,16881334-16881462,16882685-168827...    29   2.4  
11_01_0691 + 5696230-5696289,5697942-5698025,5699420-5699450,569...    28   7.4  
09_06_0118 - 20964931-20966349                                         27   9.8  

>07_03_0332 +
           16880184-16881017,16881334-16881462,16882685-16882750,
           16883159-16883224,16884419-16884457,16884858-16885028
          Length = 434

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 378 TTPSGTLNVPRVALGSVGAKVKLIVCHFQDSPRWSTVWAQISYI 247
           T+P+ +L VP+V LG     ++ IV  F  +   S ++  I+YI
Sbjct: 314 TSPTSSLKVPKVKLGDKITALQQIVSPFGKTDTASVLYEAINYI 357


>11_01_0691 +
           5696230-5696289,5697942-5698025,5699420-5699450,
           5699615-5699739
          Length = 99

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 545 HRLPMFAFSYSESFPEXGWHV-YEPIAELXRM 637
           HR    A+ +  S PE GWH+ Y+P  EL  +
Sbjct: 6   HRATPVAYGWL-SIPELGWHLEYQPFLELNHL 36


>09_06_0118 - 20964931-20966349
          Length = 472

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 411 EEAPPTFSIRETTPSGTLNVPRVALGSVGAKVKL 310
           E+A P      T   GT+ +PR+AL S GA++ L
Sbjct: 303 EKASPVSQFDVTFRGGTMEIPRLALSS-GARILL 335


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,497,786
Number of Sequences: 37544
Number of extensions: 280730
Number of successful extensions: 569
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)