Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_I09
(651 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058594-1|AAL13823.1| 619|Drosophila melanogaster LD28822p pro... 131 9e-31
AE014134-1025|AAF52327.1| 619|Drosophila melanogaster CG9115-PA... 131 9e-31
AY118359-1|AAM48388.1| 338|Drosophila melanogaster RE04768p pro... 30 3.1
AE013599-3227|AAF46733.1| 338|Drosophila melanogaster CG10440-P... 30 3.1
AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p pro... 29 4.1
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 29 4.1
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,... 29 4.1
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 29 4.1
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 29 4.1
>AY058594-1|AAL13823.1| 619|Drosophila melanogaster LD28822p
protein.
Length = 619
Score = 131 bits (316), Expect = 9e-31
Identities = 62/104 (59%), Positives = 79/104 (75%), Gaps = 6/104 (5%)
Frame = +2
Query: 356 LSVPLGVVSRIEKVGGASSKGENSYGIXIFCKDMXNLXFAHRQXNHSRRGIFEKLQQLAF 535
+ VPLGV++R+EK+GGA+S+GENSYGI IFCKDM NL FAH+Q NHSRR +FEKLQ AF
Sbjct: 99 VDVPLGVIARVEKIGGATSRGENSYGIEIFCKDMRNLRFAHKQQNHSRRTVFEKLQANAF 158
Query: 536 PLSHRLPMFAFSYSESFPE------XGWHVYEPIAELXRMGVXN 649
PLS+ +FAF+++ + GW VYEP+AEL R+GV N
Sbjct: 159 PLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPLAELRRLGVPN 202
Score = 49.2 bits (112), Expect = 5e-06
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 172 HGQDSPHVLGDIQL--LDGEKVTSVARDVTYLCPYSGPTRGVLKVTNYQLHF 321
HG +L D L+GE+ DVTY+CPY GP G L +TNY+L+F
Sbjct: 34 HGGGENGILRDTPFGYLEGEEDQDQKNDVTYVCPYRGPVFGALTITNYRLYF 85
>AE014134-1025|AAF52327.1| 619|Drosophila melanogaster CG9115-PA
protein.
Length = 619
Score = 131 bits (316), Expect = 9e-31
Identities = 62/104 (59%), Positives = 79/104 (75%), Gaps = 6/104 (5%)
Frame = +2
Query: 356 LSVPLGVVSRIEKVGGASSKGENSYGIXIFCKDMXNLXFAHRQXNHSRRGIFEKLQQLAF 535
+ VPLGV++R+EK+GGA+S+GENSYGI IFCKDM NL FAH+Q NHSRR +FEKLQ AF
Sbjct: 99 VDVPLGVIARVEKIGGATSRGENSYGIEIFCKDMRNLRFAHKQQNHSRRTVFEKLQANAF 158
Query: 536 PLSHRLPMFAFSYSESFPE------XGWHVYEPIAELXRMGVXN 649
PLS+ +FAF+++ + GW VYEP+AEL R+GV N
Sbjct: 159 PLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPLAELRRLGVPN 202
Score = 49.2 bits (112), Expect = 5e-06
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 172 HGQDSPHVLGDIQL--LDGEKVTSVARDVTYLCPYSGPTRGVLKVTNYQLHF 321
HG +L D L+GE+ DVTY+CPY GP G L +TNY+L+F
Sbjct: 34 HGGGENGILRDTPFGYLEGEEDQDQKNDVTYVCPYRGPVFGALTITNYRLYF 85
>AY118359-1|AAM48388.1| 338|Drosophila melanogaster RE04768p
protein.
Length = 338
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 326 PTDP-SATLGTLSVPLGVVSRIEKVGGASSKGENSY 430
PT P S+++ L +P V + VGGASS G +SY
Sbjct: 49 PTPPASSSVTPLGLPGAVAAAAAAVGGASSAGASSY 84
>AE013599-3227|AAF46733.1| 338|Drosophila melanogaster CG10440-PA
protein.
Length = 338
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 326 PTDP-SATLGTLSVPLGVVSRIEKVGGASSKGENSY 430
PT P S+++ L +P V + VGGASS G +SY
Sbjct: 49 PTPPASSSVTPLGLPGAVAAAAAAVGGASSAGASSY 84
>AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p
protein.
Length = 1022
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 412 GRSTTNFFN--SRNNPQWHTQCT*SSTRISWC*SEVDSLSLSGL 287
G+S+TN F+ ++NN W QC+ R W ++ SLS L
Sbjct: 169 GKSSTNGFHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLSSL 212
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 412 GRSTTNFFN--SRNNPQWHTQCT*SSTRISWC*SEVDSLSLSGL 287
G+S+TN F+ ++NN W QC+ R W ++ SLS L
Sbjct: 1286 GKSSTNGFHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLSSL 1329
>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
isoform C protein.
Length = 2159
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 412 GRSTTNFFN--SRNNPQWHTQCT*SSTRISWC*SEVDSLSLSGL 287
G+S+TN F+ ++NN W QC+ R W ++ SLS L
Sbjct: 1286 GKSSTNGFHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLSSL 1329
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 412 GRSTTNFFN--SRNNPQWHTQCT*SSTRISWC*SEVDSLSLSGL 287
G+S+TN F+ ++NN W QC+ R W ++ SLS L
Sbjct: 1286 GKSSTNGFHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLSSL 1329
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 412 GRSTTNFFN--SRNNPQWHTQCT*SSTRISWC*SEVDSLSLSGL 287
G+S+TN F+ ++NN W QC+ R W ++ SLS L
Sbjct: 1286 GKSSTNGFHHAAKNNTIWQYQCSRPLFRTCWSYRTSNATSLSSL 1329
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,088,476
Number of Sequences: 53049
Number of extensions: 490344
Number of successful extensions: 1182
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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