Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_I09
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   1.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   1.9  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   2.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.5  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 518 LQQLAFPLSHRLPMFAFSYSESFPEXGWHVY 610
           L    F L+H  P F  S S +FP+     Y
Sbjct: 228 LNHFYFMLNHNYPPFMLSNSLNFPQIRGEFY 258


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 518 LQQLAFPLSHRLPMFAFSYSESFPEXGWHVY 610
           L    F L+H  P F  S S +FP+     Y
Sbjct: 228 LNHFYFMLNHNYPPFMLSNSLNFPQIRGEFY 258


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 514 KTAAASFSSVTPTSDVCIQLF*KFP 588
           K+  A+   + PT  +C++ F +FP
Sbjct: 395 KSGDAAIVMLQPTKPMCVEAFQEFP 419


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 406 STTNFFNSRNNPQWHTQCT 350
           S+T     +  PQWHT+ T
Sbjct: 603 SSTKGITIQEPPQWHTRST 621


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,202
Number of Sequences: 438
Number of extensions: 3146
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)