Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_I08
(577 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 323 2e-87
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 229 5e-59
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 223 3e-57
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 192 7e-48
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 184 2e-45
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 175 5e-43
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 149 5e-35
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 145 8e-34
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 126 4e-28
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 125 9e-28
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 118 1e-25
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 113 3e-24
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 110 3e-23
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 109 5e-23
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 108 8e-23
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 105 7e-22
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 103 2e-21
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 103 2e-21
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 103 3e-21
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 100 3e-20
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 96 5e-19
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 95 8e-19
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 94 2e-18
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 88 2e-16
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 88 2e-16
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 83 3e-15
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 81 2e-14
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 79 7e-14
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 76 7e-13
UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genom... 67 3e-10
UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces cap... 65 1e-09
UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 64 3e-09
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 58 1e-07
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 57 3e-07
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 54 2e-06
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 53 6e-06
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 52 1e-05
UniRef50_O83225 Cluster: 30S ribosomal protein S3; n=1; Treponem... 51 2e-05
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 50 3e-05
UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 49 7e-05
UniRef50_Q7UN14 Cluster: 30S ribosomal protein S3; n=3; Planctom... 48 1e-04
UniRef50_Q12GW5 Cluster: 30S ribosomal protein S3; n=197; Bacter... 48 1e-04
UniRef50_A1KB21 Cluster: 30S ribosomal protein S3; n=67; cellula... 47 3e-04
UniRef50_Q2JFH0 Cluster: 30S ribosomal protein S3; n=94; Bacteri... 45 0.001
UniRef50_P46772 Cluster: 30S ribosomal protein S3; n=5; Thermoto... 44 0.002
UniRef50_Q6A6N2 Cluster: 30S ribosomal protein S3; n=27; Bacteri... 44 0.002
UniRef50_A6NXD5 Cluster: Putative uncharacterized protein; n=1; ... 43 0.005
UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10; Chlorob... 43 0.005
UniRef50_P0A4C3 Cluster: 30S ribosomal protein S3; n=39; Bacteri... 42 0.014
UniRef50_Q3ZZL8 Cluster: 30S ribosomal protein S3; n=18; Bacteri... 41 0.018
UniRef50_UPI00015BD7E8 Cluster: UPI00015BD7E8 related cluster; n... 41 0.024
UniRef50_P46247 Cluster: 30S ribosomal protein S3; n=3; Entomopl... 41 0.024
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 40 0.032
UniRef50_A0MNG0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.055
UniRef50_Q9XD30 Cluster: 30S ribosomal protein S3; n=4; Leptospi... 38 0.13
UniRef50_Q9PQQ4 Cluster: 30S ribosomal protein S3; n=1; Ureaplas... 38 0.17
UniRef50_Q11HQ8 Cluster: 30S ribosomal protein S3; n=167; cellul... 37 0.39
UniRef50_Q2GED3 Cluster: 30S ribosomal protein S3; n=1; Neoricke... 36 0.68
UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC pre... 36 0.90
UniRef50_P56798 Cluster: Chloroplast 30S ribosomal protein S3; n... 36 0.90
UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n... 35 1.2
UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;... 34 2.1
UniRef50_A5AUQ8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_Q0D5D7 Cluster: Os07g0567500 protein; n=5; Magnoliophyt... 33 6.4
UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8; Euteleos... 33 6.4
UniRef50_Q2RZ88 Cluster: Putative uncharacterized protein; n=1; ... 32 8.4
UniRef50_Q5CD89 Cluster: Outer membrane protein; n=8; Histophilu... 32 8.4
UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=... 32 8.4
UniRef50_Q6FX91 Cluster: Candida glabrata strain CBS138 chromoso... 32 8.4
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 323 bits (794), Expect = 2e-87
Identities = 161/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 229 bits (559), Expect = 5e-59
Identities = 108/178 (60%), Positives = 135/178 (75%)
Frame = +2
Query: 44 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 223
+SKK+K V DGVF AELNEF TRELAE GY+GVEVR TP + E+I+ A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 224 XIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 403
I ELTS++ KRF + + + +YAE+V RGL A QAE+L+ KL+ GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 404 FIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
F M +GA+G EVV+SGKLR RAKS K+ G MIHSG P D+++ A RHVL+RQ VL
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVL 183
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 223 bits (544), Expect = 3e-57
Identities = 108/174 (62%), Positives = 136/174 (78%)
Frame = +2
Query: 44 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 223
+SKKR V DGVF AEL EFL RELA+DG++GVE RVTP R+EI+I +T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 224 XIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 403
IRELT+ +Q+RFN E +QL+AE+V RGL A+AQAESLR+KL+ L VRRA G++R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 404 FIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLR 565
++MESGA+GCEV + GK++GQRAKSM F G MI SG +V+TATRH LR
Sbjct: 176 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLR 229
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 192 bits (467), Expect = 7e-48
Identities = 84/178 (47%), Positives = 128/178 (71%)
Frame = +2
Query: 44 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 223
I+KK+KFV DGVF AEL+ F ++ L + GY+G+EVR TP ++EI I AT+ Q V+G +G+
Sbjct: 18 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 77
Query: 224 XIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 403
+ELT +QKRF + +Q++AE + +GLCA AQ E++ YKL+ + VR A +++
Sbjct: 78 KHKELTQFLQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIK 137
Query: 404 FIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
+++ GA+GCE+++SGKL+ QRAK+MKF G MI +G P NDY++ A RHV +Q ++
Sbjct: 138 SVIQDGAKGCEIIISGKLKQQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIM 195
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 184 bits (447), Expect = 2e-45
Identities = 82/183 (44%), Positives = 122/183 (66%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
M +K R+ + G+F AELNE LTREL ++GY G EVR TP R+EIII A T+ +
Sbjct: 1 MKAQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFV 60
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GR ++E+ ++QKR+ + E S++++ +++ +GL A+ Q ESLRYKLI + RRA
Sbjct: 61 DNHGRRLQEVRMMIQKRWRLKEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAA 120
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
Y ++RF+M++GARGCEV +SGKLRG RA + K+ G M+ SGD +V A H+ ++Q
Sbjct: 121 YSIIRFVMDAGARGCEVAISGKLRGARASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQ 180
Query: 569 XVL 577
+
Sbjct: 181 ATI 183
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 175 bits (427), Expect = 5e-43
Identities = 106/181 (58%), Positives = 120/181 (66%)
Frame = +2
Query: 35 VNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 214
V +SKKRKF DGVF A LNE LTREL E+GYSG EVRVTP+ +EIII AT+T +VLGE
Sbjct: 2 VTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGE 61
Query: 215 KGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 394
KG+ I+ELTSVVQKRF E SV+L AEKV RG AIAQAESLRYKL+GGLA+
Sbjct: 62 KGKKIKELTSVVQKRFEFLENSVELCAEKVNNRGFYAIAQAESLRYKLLGGLAM------ 115
Query: 395 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXV 574
L QRAKSMKF G +I SG P DY++ A RHV LRQ V
Sbjct: 116 --------------------LCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHV-LRQGV 154
Query: 575 L 577
L
Sbjct: 155 L 155
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 149 bits (361), Expect = 5e-35
Identities = 68/173 (39%), Positives = 110/173 (63%)
Frame = +2
Query: 59 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIREL 238
+F+ +G+ AEL EF + L +G+S +E+R+ +II+ + +GEK +R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 239 TSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 418
+ +R +P++SV++ EKV +GLCA+ QA +R K++GG+ RRA L+ +
Sbjct: 81 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHA 140
Query: 419 GARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
A+GC+++VSGKL+GQRAKS+KF G++IHSGD DY+NT V +Q V+
Sbjct: 141 KAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVI 193
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 145 bits (351), Expect = 8e-34
Identities = 80/136 (58%), Positives = 94/136 (69%)
Frame = +2
Query: 170 EIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLR 349
EIII AT+TQ+VLG+KGR IRELTSVVQKRF E +V+LYAEK R AIAQAESLR
Sbjct: 101 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYAIAQAESLR 160
Query: 350 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCND 529
+KL+GGL VRRA YGVL F+MESG +GCEV + +I SG P D
Sbjct: 161 FKLLGGLVVRRAGYGVLSFVMESGTKGCEV----------------IGWYIISSGQPVKD 204
Query: 530 YVNTATRHVLLRQXVL 577
Y+N+ RHVLL+Q VL
Sbjct: 205 YINSVVRHVLLKQGVL 220
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 126 bits (304), Expect = 4e-28
Identities = 61/173 (35%), Positives = 103/173 (59%)
Frame = +2
Query: 59 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIREL 238
K++ D + +AEL+EF +REL + GY+ + T +II + V+G+ + ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 239 TSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 418
++ RF ++ ++ +K+ RGL A ++LR KL + +RRA Y ++R M +
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRA 135
Query: 419 GARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
GA GCEV+V+GKLR QRA++ KF G +I +G P ++ ATRH+ +RQ V+
Sbjct: 136 GAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVI 188
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 125 bits (301), Expect = 9e-28
Identities = 66/175 (37%), Positives = 104/175 (59%)
Frame = +2
Query: 53 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIR 232
+R F+ + V + ++EFL +EL GY G++++ TP+ +++II A V+G GR IR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 233 ELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 412
ELT +++K+F + ++ Q+ E++ L A QA L L G+ RRA Y LR IM
Sbjct: 64 ELTRILEKQFGL--ENPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIM 121
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
+GARG E+ +SGKL G+RAKS++F G + G+P V+ LL+ V+
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVI 176
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 118 bits (283), Expect = 1e-25
Identities = 60/162 (37%), Positives = 100/162 (61%)
Frame = +2
Query: 53 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIR 232
++KFV DG KA ++E+ +L+ GY G+E+ TP+ ++I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 233 ELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 412
+LT V ++++ ++ Q+ A++V L A A L + G R+A + LR +M
Sbjct: 64 KLTRDVANKYSL--ENPQIDAQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVM 121
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVN 538
+GA GCEVV+SGKL G R++ KFV G + HSG+P + V+
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVEEVVD 163
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 113 bits (272), Expect = 3e-24
Identities = 59/161 (36%), Positives = 94/161 (58%)
Frame = +2
Query: 53 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIR 232
++KF+ DGV + +FLT+EL GY G+++ TP+ +++ I A + V+G+ G+ +R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 233 ELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 412
+LT + ++I +S Q+ ++V A AE L L G R+A +R IM
Sbjct: 64 QLTQDLATDYDI--ESPQVEVQQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIM 121
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYV 535
ESGA GCEV+V+GKL G R+++ KF G + H G+P V
Sbjct: 122 ESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCGEPSETIV 162
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 110 bits (264), Expect = 3e-23
Identities = 60/170 (35%), Positives = 97/170 (57%)
Frame = +2
Query: 26 IMAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSV 205
+M N+ +KFV G+ K EL+E+L EL GY G+ ++ P ++II R
Sbjct: 2 VMYGENVPVHKKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIA 61
Query: 206 LGEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRA 385
+G +GR IR + VQ+RF + + V + +++ + L A L L G+ RRA
Sbjct: 62 IGRRGRNIRRVEEEVQERFPLLGR-VSIEVKELPSPELNPRVVARRLASALERGIHFRRA 120
Query: 386 CYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYV 535
YG LR IM +GA+G +++SGKL G RA++ KF+ G + + G+P ++Y+
Sbjct: 121 AYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCGEPGDEYM 170
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 109 bits (262), Expect = 5e-23
Identities = 65/182 (35%), Positives = 104/182 (57%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
M+V + K+ F+ + + +++E+L + GYS VE++ TP+ + +II A R+ +++
Sbjct: 1 MSVAKKNIKKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAII 60
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
G +G+ I+++T V+++ F IP V + KV L A A L L G RRA
Sbjct: 61 GRRGQTIKQITKVLEEWFGIPNPQVTVV--KVEEPELDARVMAFRLANALQRGFHFRRAA 118
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
Y LR IM +GA G +V VSGKLRG+RA+ K++ G + SG+ + A HVLL+
Sbjct: 119 YTTLRRIMGAGAIGAQVKVSGKLRGERARFEKYIAGKVYKSGNQVVRLTDRAIAHVLLKV 178
Query: 569 XV 574
V
Sbjct: 179 GV 180
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 108 bits (260), Expect = 8e-23
Identities = 55/166 (33%), Positives = 102/166 (61%)
Frame = +2
Query: 44 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 223
++ +++F+ DG+ + +++EF EL GY G++V TP+ ++I++ A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 224 XIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 403
IR++T+ ++ RFN+ + V + ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 404 FIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNT 541
IMESGA G E+V+SGK+ G R++ KF G + H+G+P + V++
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDS 164
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 105 bits (252), Expect = 7e-22
Identities = 55/175 (31%), Positives = 99/175 (56%)
Frame = +2
Query: 53 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIR 232
++ FV +G+ + ++E+L +EL GY G++V+VTP+ + +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 233 ELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 412
+T ++ +F++ ++ Q+ ++V L A + L G+ RR Y +R IM
Sbjct: 63 AITQKLKNKFDL--ENPQVEVKEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIM 120
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
+GA+G EV +SGK+RG R+ + KF G + G+P +V V L+ VL
Sbjct: 121 AAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVL 175
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 103 bits (248), Expect = 2e-21
Identities = 60/170 (35%), Positives = 93/170 (54%)
Frame = +2
Query: 56 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRE 235
RK + G+ LNE+L R+L Y + TPI +++I+ A V+G KG I+
Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65
Query: 236 LTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 415
+ V+++ F I ++ Q+ +V + L A A + L+ G+ RRA L IM
Sbjct: 66 IAEVLEREFGI--ENPQIDVVEVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMA 123
Query: 416 SGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLR 565
+GARG E+V+SGKL QR ++ KF G + SG+P + V+ A HVLL+
Sbjct: 124 AGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLK 173
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 103 bits (248), Expect = 2e-21
Identities = 51/175 (29%), Positives = 97/175 (55%)
Frame = +2
Query: 53 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIR 232
+R FVG+ V + ++E+ +L GYS ++ + TPI + I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 233 ELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 412
ELT + +++ ++ Q+ ++V L + L G+ R+ + +R +M
Sbjct: 63 ELTETLATEYSV--KNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
SGA+G ++VSGKL G+R+++ KF+ G M H G+P VN + + L+ ++
Sbjct: 121 GSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIV 175
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 103 bits (247), Expect = 3e-21
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = +2
Query: 374 VRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRH 553
VR ACYGVLR+IMESGA+G EVVVSGKLRGQRAK+MKF G MI SG+P DY+ + TRH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 554 VLLRQXVL 577
LLRQ +
Sbjct: 90 ALLRQGTI 97
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 100 bits (239), Expect = 3e-20
Identities = 58/161 (36%), Positives = 92/161 (57%)
Frame = +2
Query: 53 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIR 232
+RKFV + + K + E++ E+ G+ GV++ TP+ +++ + R V+G+ GR I+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 233 ELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 412
LT + K F I ++ Q+ ++V A A L L G RRA Y L IM
Sbjct: 64 ALTEKL-KDFGI--ENPQVSVDEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIM 120
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYV 535
E+GA+GCE+ +SGKL +RA++ KFV G ++H+GDP V
Sbjct: 121 EAGAKGCEIEISGKLVSERARTEKFVAGTIVHTGDPAESMV 161
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 96.3 bits (229), Expect = 5e-19
Identities = 55/174 (31%), Positives = 91/174 (52%)
Frame = +2
Query: 53 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIR 232
KR F+ + K +++E+L ++ Y+GVEV TPI + +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 233 ELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 412
+L + +K F + ++ Q+ V L A A L L G RRA + +R IM
Sbjct: 65 QLAQIFEKVFGL--ENPQITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIM 122
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXV 574
+GA G E+++SGKL +RA+ K G++ SG ++ A +L+ +
Sbjct: 123 NAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGI 176
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 95.5 bits (227), Expect = 8e-19
Identities = 58/174 (33%), Positives = 89/174 (51%)
Frame = +2
Query: 53 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIR 232
KR F+ K ++E+L ++ Y+GVE+ TPI + +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 233 ELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 412
+L V++K F + ++ Q+ L A A L L G RRA + +R IM
Sbjct: 65 QLAQVLEKFFGL--ENPQITVTAAENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIM 122
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXV 574
SGA G EV+VSGKL +RAK K G + SG ++ A +L+ V
Sbjct: 123 SSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGV 176
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 94.3 bits (224), Expect = 2e-18
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = +2
Query: 47 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 217
SKKR+FV DG+F+AELNEFLTRELAEDG S VEVRVTP + EIII+ TRTQ+VLGEK
Sbjct: 6 SKKRQFVADGIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK 62
Score = 75.8 bits (178), Expect = 7e-13
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = +2
Query: 407 IMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
+ ESGA+G E +VSGKL+GQRAKS KFV MIHS D N YV+T+ HVLLRQ VL
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVL 136
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 87.8 bits (208), Expect = 2e-16
Identities = 54/174 (31%), Positives = 89/174 (51%)
Frame = +2
Query: 53 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIR 232
K F+ + K L+EFL + GY+G+E+ TP ++I A ++G G IR
Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66
Query: 233 ELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 412
+L +++Q F + ++V + V L A A + L + RR +LR +M
Sbjct: 67 KLMTIMQTHFGL--ENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVM 124
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXV 574
E+GA G E+++SGKLR +RA+ K G + +GD + V+ A LL++ V
Sbjct: 125 EAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGV 178
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 87.8 bits (208), Expect = 2e-16
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Frame = +2
Query: 56 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRE 235
+K + + K + EFL L++ GY E+ TP+ + I+I A R ++G KG ++E
Sbjct: 12 KKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71
Query: 236 LTSVVQKRFNIPEQSVQLY-AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 412
+++++ + + + + K+ + A + + G+ RR + +R +M
Sbjct: 72 ISNILTTKLGVENPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLM 131
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXV 574
E+GA+G E+VVSGKL +RA+ K +G + G + V A HVLL+ +
Sbjct: 132 EAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGI 185
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 85.0 bits (201), Expect = 1e-15
Identities = 49/174 (28%), Positives = 90/174 (51%)
Frame = -1
Query: 571 SLPEKHMSGSSVDVVIARVSRVDHESMYKLH*FGTLTTQLARYNNFTTTGARFHDETENT 392
+L +H+S +V+ V+ ++RVDHE++ L G+ ++Q +N T H ++++T
Sbjct: 91 TLSHQHVSDGNVNKVVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLSTSSHGKSQHT 150
Query: 391 IASTTYSETSDKLVS*RFGLGDSAKTTSSHLFSIQLYRLLWNVESLLYYGSQLTDXASFL 212
+ +++ +T +L FGL S +T+ + +ESL G QL D S
Sbjct: 151 VGGSSHWQTVQQLGFQGFGLDSSGQTSLLDSLGVDDNSFRRQLESLDNQGGQLVDSTSLF 210
Query: 211 SEHTLCPGGHNNDLRADGSDPDFHAGVAVLGQLPSEELIEFRLENSISNKFSLL 50
S++TL G +N+L+ D + GV + Q EE ++ +E++IS + S L
Sbjct: 211 SQNTLGVGSLDNNLQLGWGLSDLNTGVTLFSQFSGEEFVQLGVEDTISYQLSFL 264
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 83.4 bits (197), Expect = 3e-15
Identities = 42/157 (26%), Positives = 88/157 (56%)
Frame = +2
Query: 50 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXI 229
K+RKF+ + V + + E++ +E G+ + ++ TP + I + R V+G +G +
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 230 RELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 409
+++T ++K++ I ++ Q+ + V L A+ + L G + R+A L
Sbjct: 62 QQMTDTLEKKYGI--ETPQIEVKDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRT 119
Query: 410 MESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDP 520
+++GA+G + +SGK+ G+RA+ KF++G + +SG+P
Sbjct: 120 IQAGAKGVLIKISGKISGERARYQKFIYGNVKYSGEP 156
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 81.0 bits (191), Expect = 2e-14
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Frame = +2
Query: 89 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 268
+L EFL + + G+SGVEV P ++I + TR V+G KG IRELT ++K F++
Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75
Query: 269 PEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME-SGARGCEVVV 445
+S Q+ +++ T L + + G A RRA ++ IME A G ++ +
Sbjct: 76 --KSPQVDVKEIETPELYPGVMCNRMASHIERGTAFRRATMWTIQQIMEKKDAMGVQITI 133
Query: 446 SGKLRGQRAKSMKFVHGLMIHSG 514
SGKLRG R+ K G++ +G
Sbjct: 134 SGKLRGDRSAFEKHTSGILPRAG 156
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 79.0 bits (186), Expect = 7e-14
Identities = 46/161 (28%), Positives = 82/161 (50%)
Frame = +2
Query: 56 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRE 235
R F+ V + + E+L RE G+ G+E TP +++ + A + V+G +G+ I E
Sbjct: 9 RTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHE 68
Query: 236 LTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 415
L ++ F + ++ +L ++ L A A L L G RRA + + IM+
Sbjct: 69 LQYRLKSDFKL--ENPRLEVNEIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMD 126
Query: 416 SGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVN 538
+GARGC +++SGK+ G R + KF G + G+ +++
Sbjct: 127 AGARGCLIILSGKISGPRHRVQKFQQGHIKFCGETALQFMD 167
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 75.8 bits (178), Expect = 7e-13
Identities = 42/173 (24%), Positives = 86/173 (49%)
Frame = +2
Query: 56 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRE 235
++ + D K + E+L L + Y ++ T + + I+I+A + ++G KG+ ++
Sbjct: 3 KRIIDDNKKKWMIKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKA 62
Query: 236 LTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 415
L +++ +FN+ + + E +A + + G+ RRA LR + E
Sbjct: 63 LADILKSKFNLDNVVIDVIQEPHPEYNARLVALR--IADAMAKGIRFRRAAIIALRQLQE 120
Query: 416 SGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXV 574
+ +G EV++SGKL +R++ K+ G++I +G + V A VLL+ +
Sbjct: 121 ANVQGAEVIISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEAVIPVLLKPGI 173
>UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 149
Score = 66.9 bits (156), Expect = 3e-10
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +2
Query: 113 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSV 247
+++EDGYSGV+VRVTP+R EIII ATRTQ+ LGEK R IREL V
Sbjct: 16 DISEDGYSGVQVRVTPMRMEIIIHATRTQNALGEKRRRIRELILV 60
>UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 151
Score = 64.9 bits (151), Expect = 1e-09
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +2
Query: 41 NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEII 178
+ISK+RKFV GVF A LN F RELAE+GYSGVEVRVTP ++II
Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 286
Score = 64.1 bits (149), Expect = 2e-09
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +2
Query: 113 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVV 250
++ EDGYS V+VRVTP+ EII+ ATRTQ+ L EKGR IRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 63.7 bits (148), Expect = 3e-09
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +2
Query: 113 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSV 247
++ EDGYS V+VRVTP+ EIII ATRTQ+ L EKGR IRELT V
Sbjct: 406 DILEDGYSDVKVRVTPMGMEIIIRATRTQNALSEKGRRIRELTLV 450
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 113 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
++ EDGYS ++V+VT +R EIII ATRTQ+ L
Sbjct: 281 DIPEDGYSDIKVKVTGMRMEIIIHATRTQNAL 312
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 58.0 bits (134), Expect = 1e-07
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Frame = +2
Query: 56 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRE 235
RKF+ + EF+ L S V +R TPI + +II + R + + E+ + +
Sbjct: 7 RKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEERKAHLAK 66
Query: 236 LTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGL-AVRRACYGVLRFIM 412
L ++ +F + + +++ + L A AE L + + A RR L IM
Sbjct: 67 L---LELKFGLEKPVIEVLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIM 121
Query: 413 ESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSG 514
+GA G E+V++G+L GQR K+ +F G + +G
Sbjct: 122 NAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTG 155
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/137 (25%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Frame = +2
Query: 89 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 268
++ + + ++LA G + +E+ + +II A + V+G+ G I+EL +++ +
Sbjct: 38 QIRQLINKKLAAAGIARIEIERAGQQVNVIISAAKPGVVIGKGGESIKELRGDIERL--V 95
Query: 269 PEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 448
+V + ++ + A A + ++ A RRA + +MESGARG +V++S
Sbjct: 96 SAGTVAVNVAEIPNPNISAPLVALRIAEQIERRFAFRRAMKQAAQRVMESGARGVKVILS 155
Query: 449 GKLRG-QRAKSMKFVHG 496
G+L G ++A++ K + G
Sbjct: 156 GRLGGAEQARTEKVLEG 172
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 464 QRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
QRAKSMKF G M+ SG P +Y+++A RHVLLRQ VL
Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVL 39
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +2
Query: 242 SVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKL-IGGLAVRRACYGVLRFIMES 418
+++ F I +++ + + + + Q+ ++ + R + LRF++ S
Sbjct: 112 NIISHLFFINSNKLKILYKNYKSSNISTMTQSSRMKEAFNYTNKSFRSIIFNTLRFLINS 171
Query: 419 GARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNT 541
G RGC + + G R +R K+ KF GL+ HSG ND++++
Sbjct: 172 GVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDS 212
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +2
Query: 113 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQ 253
++ EDGYS ++V+VT + EIII AT+TQ+ L E GR +RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9;
Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma
mobile
Length = 225
Score = 51.6 bits (118), Expect = 1e-05
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +2
Query: 173 IIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRY 352
+++ + + ++LG+ G I +LT +QK E + + + L AI AE +
Sbjct: 67 VLVHSAKPGAILGQNGENINKLTQDIQKLLRNKELKLNIEVVNIKNPDLNAIILAEQIAI 126
Query: 353 KLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVHGLM 502
KL R A +R M+SGA+G + VSG+L G A+S + G M
Sbjct: 127 KLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSEGEM 177
>UniRef50_O83225 Cluster: 30S ribosomal protein S3; n=1; Treponema
pallidum|Rep: 30S ribosomal protein S3 - Treponema
pallidum
Length = 247
Score = 50.8 bits (116), Expect = 2e-05
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Frame = +2
Query: 14 APVAI-MAVNNISKKRKFVGDGVFKAELNEFLT--------RELAEDGYSGVEVRVTPIR 166
+P+ + + +N + R + G + A L+E L E + VE+ P R
Sbjct: 6 SPIGLRLGINKVWSSRWYAGPREYAALLHEDLRIRSMIRSFPECKNADIAEVEIVRHPQR 65
Query: 167 SEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESL 346
+++ R V+G KG I ++ + VQKR N + VQ+ +++ L A A+++
Sbjct: 66 VTVVMHTARPGVVIGAKGVNIEKIGAEVQKRLN---KKVQIKVKEIKRMELNAYLVAQNV 122
Query: 347 RYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 463
+L ++ R+ M+SGA+G ++ VSG+L G
Sbjct: 123 ARQLTARVSFRKCLRQACAGTMKSGAQGVKIRVSGRLGG 161
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 50.4 bits (115), Expect = 3e-05
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +2
Query: 86 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 265
+ + ++L LA+ S + + I I R ++G+ G+ + +L +++
Sbjct: 36 SRIRQYLNARLAKASVSRIVIERALKLVTITICTARPGMIIGKAGQEVDKLKEELKR--- 92
Query: 266 IPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 445
I ++ VQ+ ++ L A AE++ +L G +A RRA + M GA G ++ V
Sbjct: 93 ITKKDVQINIYEIRKPELDAAIVAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQV 152
Query: 446 SGKLRG-QRAKSMKFVHG 496
SG+L G + A+S F G
Sbjct: 153 SGRLNGAEMARSEMFKEG 170
>UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter
sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp.
BAL39
Length = 281
Score = 49.2 bits (112), Expect = 7e-05
Identities = 35/150 (23%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Frame = +2
Query: 89 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 268
++ ++L+ +A+ G + V + T R + I R V+G+ G+ + ++ ++K +
Sbjct: 37 KIRKYLSARIAKGGVAKVVIERTLKRITVTIHTARPGIVIGKAGQEVDKIKEELKK---L 93
Query: 269 PEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 448
++ +Q+ ++ L A AE + +L ++ RRA + M GA G +++ S
Sbjct: 94 TKKEIQINIFEIKRPELDAQLVAEGVAKQLEARISFRRAMKSTIAATMRMGAEGIKIMTS 153
Query: 449 GKLRG-QRAKSMKFVHG-LMIHSGDPCNDY 532
G+L G + A+S ++ G + +H+ DY
Sbjct: 154 GRLGGAEMARSEQYKEGRIPLHTFRADIDY 183
>UniRef50_Q7UN14 Cluster: 30S ribosomal protein S3; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S3 -
Rhodopirellula baltica
Length = 236
Score = 48.4 bits (110), Expect = 1e-04
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Frame = +2
Query: 47 SKKRKFVGDGVFKAELNEFLTRELAEDGY--SGVE-VRVTPIRSEIIIM--ATRTQSVLG 211
+ K+ F V ++ EF+T+ + Y +G++ + + R E+ +M R ++G
Sbjct: 24 ASKQDFADLLVEDRKIREFITKHPKKSQYKSAGIDRIEIERTRDEVRVMLYVARPGLIIG 83
Query: 212 EKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 391
+KG+ I L + +Q N+ + + L E+V L A AE + +L + RR
Sbjct: 84 KKGQEIEILQAELQ---NLVGRRINLKVEEVGRPELQAQLVAEDISQQLAKRSSFRRTMK 140
Query: 392 GVLRFIMESGARGCEVVVSGKLRG 463
+L M++GA+G ++ ++G+L G
Sbjct: 141 RMLEQTMDAGAKGIKIQMAGRLGG 164
>UniRef50_Q12GW5 Cluster: 30S ribosomal protein S3; n=197;
Bacteria|Rep: 30S ribosomal protein S3 - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 301
Score = 48.4 bits (110), Expect = 1e-04
Identities = 36/139 (25%), Positives = 63/139 (45%)
Frame = +2
Query: 47 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRX 226
+ R F G ++ E+L +L S V + + I I + R V+G+KG
Sbjct: 24 ASNRDFAGMLAEDIKVREYLKAKLKNAAVSRVLIERPAKNARITIFSARPGVVIGKKGED 83
Query: 227 IRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRF 406
I L + ++ +P V + E+V + A A+S+ +L + RRA ++
Sbjct: 84 IENLKKELSRQLGVP---VAVNIEEVRKPEIDAKLIADSITQQLEKRIMFRRAMKRAMQN 140
Query: 407 IMESGARGCEVVVSGKLRG 463
M GA G +++ SG+L G
Sbjct: 141 AMRLGALGIKIMSSGRLNG 159
>UniRef50_A1KB21 Cluster: 30S ribosomal protein S3; n=67; cellular
organisms|Rep: 30S ribosomal protein S3 - Azoarcus sp.
(strain BH72)
Length = 260
Score = 47.2 bits (107), Expect = 3e-04
Identities = 32/125 (25%), Positives = 60/125 (48%)
Frame = +2
Query: 89 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 268
++ ++L + LA V + + + + + R V+G+KG I L +QK +
Sbjct: 38 KVRDYLKKRLAHASVGRVVIERPAKNARVTLFSARPGVVIGKKGEDIEALKRDLQKIVGV 97
Query: 269 PEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 448
P V + E+V + A A+S+ +L + RRA ++ M GA+G +++ S
Sbjct: 98 P---VHVNIEEVRKPEIDAKLIADSIAQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSS 154
Query: 449 GKLRG 463
G+L G
Sbjct: 155 GRLNG 159
>UniRef50_Q2JFH0 Cluster: 30S ribosomal protein S3; n=94;
Bacteria|Rep: 30S ribosomal protein S3 - Frankia sp.
(strain CcI3)
Length = 315
Score = 45.2 bits (102), Expect = 0.001
Identities = 35/144 (24%), Positives = 67/144 (46%)
Frame = +2
Query: 56 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRE 235
+ +VG+ V ++ + ++R + G S V++ T R + I R V+G +G
Sbjct: 29 KAYVGEDV---KIRKMMSRGMERAGISRVDIERTQGRLRVDIHTARPGIVIGRRGAEADR 85
Query: 236 LTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 415
+ ++K + + VQL +V + A A+ + +L ++ RRA ++ M+
Sbjct: 86 IRGDLEK---LTGKQVQLNILEVKNPEVDAQLVAQGVAEQLSSRVSFRRAMRKAMQTAMK 142
Query: 416 SGARGCEVVVSGKLRGQRAKSMKF 487
GA+G V SG+L G +F
Sbjct: 143 GGAKGIRVQCSGRLGGAEMSRSEF 166
>UniRef50_P46772 Cluster: 30S ribosomal protein S3; n=5;
Thermotogaceae|Rep: 30S ribosomal protein S3 -
Thermotoga maritima
Length = 209
Score = 44.4 bits (100), Expect = 0.002
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +2
Query: 89 ELNEFLTRELAEDGYSGVEV-RVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 265
E+ + + + G S + V R R I + R ++G KG I L ++++FN
Sbjct: 37 EIRKIIKNKYYHAGISEIYVERPDAERINITVKTARPGIIIGRKGSEITSLREELERKFN 96
Query: 266 IPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 445
+ V + E++ T L A AES+ ++ + + A + M GA+G +V+V
Sbjct: 97 ---RRVVINIEEIKTPELDAQLVAESIASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMV 153
Query: 446 SGKLRG 463
+G+L G
Sbjct: 154 AGRLGG 159
>UniRef50_Q6A6N2 Cluster: 30S ribosomal protein S3; n=27;
Bacteria|Rep: 30S ribosomal protein S3 -
Propionibacterium acnes
Length = 269
Score = 44.4 bits (100), Expect = 0.002
Identities = 35/135 (25%), Positives = 61/135 (45%)
Frame = +2
Query: 59 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIREL 238
+ VG+ V ++ E+L + L G S +E+ R I + A R V+G G +
Sbjct: 30 ELVGEDV---KIREWLHKNLERAGLSSIEIERRSERVTIFLYAARPGIVIGRNGAEAERV 86
Query: 239 TSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 418
++K + + +QL +V + A A+ + +L +A RRA + M +
Sbjct: 87 RGELEK---LTGKQIQLNILEVKSPETDAQLVAQGIAEQLAARVAFRRAMRKAQQSAMNA 143
Query: 419 GARGCEVVVSGKLRG 463
GA G + SG+L G
Sbjct: 144 GALGIRIKCSGRLGG 158
>UniRef50_A6NXD5 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 283
Score = 43.2 bits (97), Expect = 0.005
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Frame = +2
Query: 65 VGDGVFK-AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELT 241
VGD + + ++ +FL + G +E+ + I + R V+G+ G I L
Sbjct: 29 VGDLLVEDKKIRDFLKKTQYGAGIPKIEIERDNAKVRIYLHCARPGVVIGKGGEAIEALR 88
Query: 242 SVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 421
++K +SV L +V + A AE++ +L + RRA + M G
Sbjct: 89 LQLEKMLG---KSVALNIVEVKNPDMDAQLIAENIAQQLEKRIGFRRAMKNAMGRAMRMG 145
Query: 422 ARGCEVVVSGKLRGQRAKSMKFVH 493
ARG + VSG+L G + H
Sbjct: 146 ARGIKTQVSGRLGGAEIARTEHYH 169
>UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10;
Chlorobiaceae|Rep: 30S ribosomal protein S3 - Chlorobium
tepidum
Length = 253
Score = 43.2 bits (97), Expect = 0.005
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Frame = +2
Query: 59 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIREL 238
K D V + ++ L +E A G + + + T +I I A R +++G KG I L
Sbjct: 32 KIKQDQVIRNYVHARLKKEKA--GIAKIVIERTTKHIKINIYAARPGAIVGHKGEEINNL 89
Query: 239 TSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 418
+ Q+ I + V++ +V + A E++ Y+L ++ RRA ++ M +
Sbjct: 90 S---QELTRITGKEVKIDVIEVIKPEIEAQLIGENIAYQLENRVSFRRAMKMAIQQAMRA 146
Query: 419 GARGCEVVVSGKLRG-QRAKSMKFVHG-LMIHSGDPCNDYVNTATRHVL 559
GA G + +G+L G + A++ ++ G + +H+ DY + T H +
Sbjct: 147 GAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTLRANVDYA-SVTAHTI 194
>UniRef50_P0A4C3 Cluster: 30S ribosomal protein S3; n=39;
Bacteria|Rep: 30S ribosomal protein S3 - Streptococcus
pneumoniae
Length = 217
Score = 41.5 bits (93), Expect = 0.014
Identities = 29/124 (23%), Positives = 59/124 (47%)
Frame = +2
Query: 92 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 271
+ +F+ +ELA+ S +E+ + + + + V+G+ G + L + + K +
Sbjct: 38 IRKFVQKELADAAVSTIEIERAVNKVNVSLHTAKPGMVIGKGGANVDALRAKLNK---LT 94
Query: 272 EQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 451
+ V + ++ L A E + +L +A RRA ++ M +GA+G + VSG
Sbjct: 95 GKQVHINIIEIKQPDLDAHLVGEGIARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSG 154
Query: 452 KLRG 463
+L G
Sbjct: 155 RLNG 158
>UniRef50_Q3ZZL8 Cluster: 30S ribosomal protein S3; n=18;
Bacteria|Rep: 30S ribosomal protein S3 - Dehalococcoides
sp. (strain CBDB1)
Length = 278
Score = 41.1 bits (92), Expect = 0.018
Identities = 28/135 (20%), Positives = 65/135 (48%)
Frame = +2
Query: 89 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 268
+L + ++++ + S V++ + + + R V+G G+ + E+ ++ ++
Sbjct: 38 KLRKAISKKYVDAAISQVDIERQSNKVTVSVRTARPGIVIGRGGQRVDEMRHFLE---DL 94
Query: 269 PEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 448
+ VQL +++ L A A S+ ++ +A RRA + M++GA+G ++ S
Sbjct: 95 IGKKVQLNIVEISQAELDAFLVARSVAEQIERRVAYRRAMKQAIFRSMQAGAKGIKICAS 154
Query: 449 GKLRGQRAKSMKFVH 493
G+L G + +H
Sbjct: 155 GRLGGVEIARREVMH 169
>UniRef50_UPI00015BD7E8 Cluster: UPI00015BD7E8 related cluster; n=1;
unknown|Rep: UPI00015BD7E8 UniRef100 entry - unknown
Length = 231
Score = 40.7 bits (91), Expect = 0.024
Identities = 29/138 (21%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Frame = +2
Query: 92 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 271
+ +++ G S V + + + + I++++ ++G KG + +L + +++ +
Sbjct: 39 IRKYIKERYKSAGISKVTIERSGEKIRVRILSSKPGIIIGRKGAEVDQLKNDLERI--VK 96
Query: 272 EQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 451
+ + L ++V L A AE + ++ ++ RRA + ++SGA+G +V V G
Sbjct: 97 NKDISLSVDEVRVPQLDAQLVAEDIALQIERRVSHRRAMKRAIDNAIKSGAKGIKVQVKG 156
Query: 452 KLRG-QRAKSMKFVHGLM 502
++ G A++ F+ G M
Sbjct: 157 RIGGADLARAEWFLVGRM 174
>UniRef50_P46247 Cluster: 30S ribosomal protein S3; n=3;
Entomoplasmatales|Rep: 30S ribosomal protein S3 -
Mesoplasma florum (Acholeplasma florum)
Length = 241
Score = 40.7 bits (91), Expect = 0.024
Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Frame = +2
Query: 89 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 268
++ E + + L + S +++ T +II R VLG++G+ + + + VQK
Sbjct: 38 KIREGVLKLLKDAAVSKIKIERTNSNITLIIRTARPAIVLGQEGKNVSNIATAVQKIAKD 97
Query: 269 PEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 448
V++ +V A A + ++ + R +R +++G +G + VS
Sbjct: 98 RNLKVEVKVIEVKNPDADATLVARWIGEQITNRASFRTVQKLAIRKALKAGVKGIKTSVS 157
Query: 449 GKLRG-QRAKSMKFVHG 496
G+L G + A++ ++ G
Sbjct: 158 GRLGGVEMARTEGYIEG 174
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 40.3 bits (90), Expect = 0.032
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Frame = +2
Query: 92 LNEFLTRELAEDGYSGVEV-RVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQK---R 259
+ ++L L + + + R P R + I + V+G G + L S + K
Sbjct: 39 IRKYLETNLKDAAVDRITIERTEPTRINLTIHTAKPGIVIGRGGADVERLRSELSKIVDT 98
Query: 260 FNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEV 439
+ + V + ++ L A + + L +A RRA G ++ + +GA+G
Sbjct: 99 YKGQHKRVNINIVEIRKPDLNAHLVGQQIAADLERRVAFRRAMRGAIQRVQRAGAKGVRT 158
Query: 440 VVSGKLRG 463
+VSG+L G
Sbjct: 159 MVSGRLNG 166
>UniRef50_A0MNG0 Cluster: Putative uncharacterized protein; n=1;
Thermus phage phiYS40|Rep: Putative uncharacterized
protein - Thermus phage phiYS40
Length = 1014
Score = 39.5 bits (88), Expect = 0.055
Identities = 27/102 (26%), Positives = 51/102 (50%)
Frame = +2
Query: 8 FSAPVAIMAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMA 187
FS ++ + ++ + + + +FK+E FL+R L+E Y+ ++ RS I
Sbjct: 205 FSEFRSLFELAKSTRNQLSISERIFKSEREIFLSRTLSEF-YNESLNAISIARSNFIAQL 263
Query: 188 TRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATR 313
R L +K + E+ + ++RFN + QLYAE++ R
Sbjct: 264 NRVNESL-QKAQSPEEVARLQEERFNYLKSLTQLYAEELKIR 304
>UniRef50_Q9XD30 Cluster: 30S ribosomal protein S3; n=4;
Leptospira|Rep: 30S ribosomal protein S3 - Leptospira
interrogans
Length = 225
Score = 38.3 bits (85), Expect = 0.13
Identities = 27/125 (21%), Positives = 53/125 (42%)
Frame = +2
Query: 89 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 268
++ +F+ G V + P + + + + V+G+KG I + +++ +
Sbjct: 37 KIRKFVQNRFNNAGVVKVVIERFPEKINVNLHTAKPGIVIGQKGANIEAVKKILKTMTDK 96
Query: 269 PEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 448
P + +K T C AES+ ++ RR LR M G G ++++S
Sbjct: 97 PVNLNIIEVKKPETVAQCI---AESIALQIEQRQPFRRVMKQELRRAMRGGVEGIKILIS 153
Query: 449 GKLRG 463
G+L G
Sbjct: 154 GRLNG 158
>UniRef50_Q9PQQ4 Cluster: 30S ribosomal protein S3; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S3 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 257
Score = 37.9 bits (84), Expect = 0.17
Identities = 30/139 (21%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Frame = +2
Query: 89 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 268
++ ++L+ + G VE+ R + + A ++ ++G + + + + K
Sbjct: 39 KIRKYLSTKYKNAGIDHVEIERDQQRVNVYVYAVQSGLLIGTEASEKKLIELAINKIVG- 97
Query: 269 PEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 448
+Q V L +V L A A + + ++ R A V++ ++++GARG + VS
Sbjct: 98 RKQLVSLKVVEVQIPELQASLMAREIADAIENRVSFRIAQKMVIKKVLKAGARGIKTHVS 157
Query: 449 GKLRG-QRAKSMKFVHGLM 502
G+L G + A+ + G+M
Sbjct: 158 GRLGGVEMAREEGYTQGVM 176
>UniRef50_Q11HQ8 Cluster: 30S ribosomal protein S3; n=167; cellular
organisms|Rep: 30S ribosomal protein S3 - Mesorhizobium
sp. (strain BNC1)
Length = 235
Score = 36.7 bits (81), Expect = 0.39
Identities = 29/125 (23%), Positives = 55/125 (44%)
Frame = +2
Query: 89 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 268
++ ++ EL + S V + + + I + R ++G+KG I +L + + N
Sbjct: 38 KIRTYIENELKQAAISKVVIERPHKKCRVTIHSARPGLIIGKKGADIEKLRRKITQMTNA 97
Query: 269 PEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 448
L +V + A A+S+ +L +A RRA ++ M GA G + +
Sbjct: 98 ---ETHLNIVEVRKPEIDARLIAQSIAQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCT 154
Query: 449 GKLRG 463
G+L G
Sbjct: 155 GRLGG 159
>UniRef50_Q2GED3 Cluster: 30S ribosomal protein S3; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S3 - Neorickettsia sennetsu (strain Miyayama)
Length = 211
Score = 35.9 bits (79), Expect = 0.68
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Frame = +2
Query: 92 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN-I 268
+ +++ A G S V ++ +I + + ++G+KG + + K+F +
Sbjct: 39 VTKYVESSFAHIGISKVIIKRKGASCDITLHCMKPGLIIGKKGADLESFRLKLNKKFGFV 98
Query: 269 PEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM-ESGARGCEVVV 445
P +V +V A+ A+S+ ++L + RR + +M ES +G +V
Sbjct: 99 PSLNV----VEVKKPNSSAVLVAKSIAFQLEKRSSFRRVIKKAIATVMRESDVKGVKVAC 154
Query: 446 SGKLRG-QRAKSMKFVHG-LMIHSGDPCNDY 532
SG+L G + A++ F G + +H+ DY
Sbjct: 155 SGRLSGAEIARTEVFKEGSIPLHTMRADIDY 185
>UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC
precursor - Enterococcus faecalis (Streptococcus
faecalis)
Length = 545
Score = 35.5 bits (78), Expect = 0.90
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 62 FVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIII 181
FVGDG F+ + EFL +L E+ G++V +TP+ + + +
Sbjct: 397 FVGDGEFEKKAGEFLQGQL-EENLEGLKVNITPVPANVFM 435
>UniRef50_P56798 Cluster: Chloroplast 30S ribosomal protein S3;
n=78; Streptophyta|Rep: Chloroplast 30S ribosomal
protein S3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 218
Score = 35.5 bits (78), Expect = 0.90
Identities = 22/122 (18%), Positives = 58/122 (47%)
Frame = +2
Query: 125 DGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVQLYAEKV 304
+G + +E++ +III + ++ +K R + EL VQK N + + + ++
Sbjct: 58 EGIARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRI 117
Query: 305 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 484
+ AE + +L ++ R+A + ++ +G +V ++G++ G+ ++
Sbjct: 118 SNPYGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVE 177
Query: 485 FV 490
++
Sbjct: 178 WI 179
>UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n=2;
Chlorophyta|Rep: Chloroplast 30S ribosomal protein S3 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 235
Score = 35.1 bits (77), Expect = 1.2
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = +2
Query: 140 VEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI-----PEQSVQLYAEKV 304
VEV + R +++ R +K + +R+ V +F P V L V
Sbjct: 66 VEVEIRTTRPGLLVGRKRQNC---DKLKQLRDELQVELNKFRAKNGVSPTAKVALQVTTV 122
Query: 305 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 463
+ AI AE L +L +A RRA VL I +G ++ VSG+L G
Sbjct: 123 QNKSSEAIVIAEFLVNQLERRIAFRRALRRVLSIIQRDRVQGAKIQVSGRLNG 175
>UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 328
Score = 34.3 bits (75), Expect = 2.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 331 PGRISKIQAYRRSRCTSCLLWCSPFHH 411
PGR +A RRSRC+ C W HH
Sbjct: 240 PGRDWSAEASRRSRCSRCCTWSGDIHH 266
>UniRef50_A5AUQ8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 617
Score = 34.3 bits (75), Expect = 2.1
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 176 IIMATRTQSVLGEK-GRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRY 352
+I TRT S+ + + IREL SV Q +I + A A RGL A+ ES+R
Sbjct: 101 VIRQTRTLSMTSAQFPKKIRELQSVTQSYVSIDATTKDKAAALAAARGLGRNAKIESVRL 160
Query: 353 KLIGGLAVRRACYGVLRFIMESGARG 430
++ L + +C G+ M + + G
Sbjct: 161 PMLTVLKL-HSCEGITSASMAAISHG 185
>UniRef50_Q0D5D7 Cluster: Os07g0567500 protein; n=5;
Magnoliophyta|Rep: Os07g0567500 protein - Oryza sativa
subsp. japonica (Rice)
Length = 478
Score = 32.7 bits (71), Expect = 6.4
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 379 SCLLWCSPFHHGIWRPWL*SCCIWQAAWSTCQINEVCTWTHD 504
SCL WC F H R L S C AAW +N C H+
Sbjct: 246 SCLGWCGGFRHTPCRRGLSSECGGAAAWDQPTVNLRCPPCHE 287
>UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8;
Euteleostomi|Rep: Transmembrane protein 56 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 264
Score = 32.7 bits (71), Expect = 6.4
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 386 CYGVLRFI-MESGARGCEVVVSGKLRGQRAKSMK 484
C +L I M ARGC V++GKL+G++A S K
Sbjct: 222 CLDILNIIWMYKIARGCYKVITGKLKGRKADSKK 255
>UniRef50_Q2RZ88 Cluster: Putative uncharacterized protein; n=1;
Salinibacter ruber DSM 13855|Rep: Putative
uncharacterized protein - Salinibacter ruber (strain DSM
13855)
Length = 363
Score = 32.3 bits (70), Expect = 8.4
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 326 IAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMI 505
+A E Y L RR C GV R +E G VV + + G+R K + G +
Sbjct: 286 LAPRELAAYDLRLPNEARRPCVGVRRVRVER-LDGTTVVSAPRRPGRRPKRGRLARGALP 344
Query: 506 HSGDPCND 529
++GD C D
Sbjct: 345 YAGDDCLD 352
>UniRef50_Q5CD89 Cluster: Outer membrane protein; n=8; Histophilus
somni|Rep: Outer membrane protein - Haemophilus somnus
(Histophilus somni)
Length = 384
Score = 32.3 bits (70), Expect = 8.4
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Frame = -1
Query: 523 ARVSRVDHESMYKLH*FGTLTTQLARYNNFTTTGARFHDETENTIASTTYSETSDKLVS* 344
A + V +++ K+ G + L ++ + T R +D A + +
Sbjct: 17 ANATTVYNQNGTKVEVGGRVDVMLGKFGDAQRTDLRNNDSRVEFKAEHEVQNGLKAIGAV 76
Query: 343 RFGLGDSAKTTSSHLFSIQLYRLLW-----NVESLLYYGSQLTDXASF-LSEHTLCPGGH 182
RFGLGDS++ SS I+L + LW N + +G Q T L++HT GG+
Sbjct: 77 RFGLGDSSEEDSS-FKEIKLSK-LWLGLKHNDIGKVTFGKQNTTADDVQLNDHTYIFGGN 134
Query: 181 NN 176
NN
Sbjct: 135 NN 136
>UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g06190.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 295
Score = 32.3 bits (70), Expect = 8.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 241 SQLTDXASFLSEHTLCPGGHNNDLRADGSD 152
S+L + + LSEH+L GH +L ADG D
Sbjct: 255 SELLEYVARLSEHSLTSSGHRKELFADGCD 284
>UniRef50_Q6FX91 Cluster: Candida glabrata strain CBS138 chromosome
B complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome B complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 445
Score = 32.3 bits (70), Expect = 8.4
Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 2 AFFSAPVAIMAVNNISKKRK--FVGDGVFKAELNEFLTRELAEDGYSGVEV 148
+F+ A+MA+NN++++ + F D + K +EFL +L++DGY+ +E+
Sbjct: 254 SFYPLQPAMMAINNVARQIEYYFSADNMNK---DEFLKTKLSKDGYAPLEL 301
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,117,292
Number of Sequences: 1657284
Number of extensions: 11739345
Number of successful extensions: 32453
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 31306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32411
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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