Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_I08
(577 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 323 2e-88
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 323 2e-88
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 323 2e-88
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 323 2e-88
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 323 2e-88
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 323 2e-88
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 323 2e-88
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 323 2e-88
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 323 2e-88
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 322 4e-88
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 322 4e-88
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 322 5e-88
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 322 7e-88
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 321 1e-87
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 216 5e-56
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 205 1e-52
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 184 3e-46
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 163 4e-40
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 102 8e-22
BC040232-1|AAH40232.1| 696|Homo sapiens CCDC88B protein protein. 30 6.7
BC030194-1|AAH30194.1| 223|Homo sapiens CCDC88B protein protein. 30 6.7
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 323 bits (794), Expect = 2e-88
Identities = 161/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 323 bits (794), Expect = 2e-88
Identities = 161/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 323 bits (794), Expect = 2e-88
Identities = 161/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 323 bits (794), Expect = 2e-88
Identities = 161/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 323 bits (794), Expect = 2e-88
Identities = 161/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 323 bits (794), Expect = 2e-88
Identities = 161/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 323 bits (794), Expect = 2e-88
Identities = 161/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 323 bits (794), Expect = 2e-88
Identities = 161/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 323 bits (794), Expect = 2e-88
Identities = 161/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 322 bits (792), Expect = 4e-88
Identities = 158/178 (88%), Positives = 167/178 (93%)
Frame = +2
Query: 44 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 223
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 224 XIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 403
IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 404 FIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
FIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ VL
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVL 181
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 322 bits (792), Expect = 4e-88
Identities = 158/178 (88%), Positives = 167/178 (93%)
Frame = +2
Query: 44 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 223
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 224 XIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 403
IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 404 FIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
FIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ VL
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVL 181
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 322 bits (791), Expect = 5e-88
Identities = 160/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 322 bits (790), Expect = 7e-88
Identities = 160/183 (87%), Positives = 170/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 321 bits (789), Expect = 1e-87
Identities = 160/183 (87%), Positives = 169/183 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAE LRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 XVL 577
VL
Sbjct: 180 GVL 182
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 216 bits (527), Expect = 5e-56
Identities = 105/120 (87%), Positives = 111/120 (92%)
Frame = +2
Query: 215 KGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 394
+GR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 395 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXV 574
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ V
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 205 bits (500), Expect = 1e-52
Identities = 103/118 (87%), Positives = 110/118 (93%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 382
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 184 bits (447), Expect = 3e-46
Identities = 89/97 (91%), Positives = 92/97 (94%)
Frame = +2
Query: 287 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 466
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 467 RAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
RAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ VL
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVL 97
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 163 bits (396), Expect = 4e-40
Identities = 82/96 (85%), Positives = 88/96 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRXIRELTSVVQKRFNIPEQSVQLYAEKVATRG 316
GEKGR IRELT+VVQKRF PE SV+LYAEKVATRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 102 bits (245), Expect = 8e-22
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +2
Query: 410 MESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQXVL 577
MESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQ VL
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVL 56
>BC040232-1|AAH40232.1| 696|Homo sapiens CCDC88B protein protein.
Length = 696
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 117 WPRTATPAWKSGS---LPSARRSLLWPP 191
WP A P W SGS LP +RSL PP
Sbjct: 634 WPPRAAPGWSSGSSRWLPLRQRSLGDPP 661
>BC030194-1|AAH30194.1| 223|Homo sapiens CCDC88B protein protein.
Length = 223
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 117 WPRTATPAWKSGS---LPSARRSLLWPP 191
WP A P W SGS LP +RSL PP
Sbjct: 161 WPPRAAPGWSSGSSRWLPLRQRSLGDPP 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,964,333
Number of Sequences: 237096
Number of extensions: 1860351
Number of successful extensions: 7657
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7656
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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