Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_I03
         (665 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RTH9 Cluster: Predicted protein; n=3; Nematostella ve...    35   1.5  
UniRef50_Q8CC74 Cluster: Adult male epididymis cDNA, RIKEN full-...    34   3.5  
UniRef50_Q8IJ39 Cluster: Putative uncharacterized protein; n=1; ...    33   8.2  

>UniRef50_A7RTH9 Cluster: Predicted protein; n=3; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1782

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = -2

Query: 151  SASKACFRLTHYIMQKIYRQHTSTSYKQKLTIKSNKYLQSLTGRNNITNY 2
            +A K C  +T+Y +  +YR  TSTSYK  +T  +++Y   LTG     NY
Sbjct: 1581 TAPKPCHPITNYYI--LYRMSTSTSYKIAITDNNDQYY--LTGLTEGANY 1626


>UniRef50_Q8CC74 Cluster: Adult male epididymis cDNA, RIKEN
           full-length enriched library, clone:9230104O11
           product:hypothetical protein, full insert sequence; n=1;
           Mus musculus|Rep: Adult male epididymis cDNA, RIKEN
           full-length enriched library, clone:9230104O11
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 168

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 107 LHDIMGQTEARLACRFVCITCYIXMIFFFLCIPFCFGSRLFS 232
           LH    + EA L C   C  C++  +F  L I F + S  FS
Sbjct: 24  LHTCSAEDEASLCCFCCCCCCFVLFLFVLLIILFIYISNYFS 65


>UniRef50_Q8IJ39 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1681

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 18/61 (29%), Positives = 24/61 (39%)
 Frame = -2

Query: 184  NHXNVACYTNKSASKACFRLTHYIMQKIYRQHTSTSYKQKLTIKSNKYLQSLTGRNNITN 5
            N+ NV+ Y N   S     L HY +   Y +    S+       SN Y  +    NN  N
Sbjct: 1572 NNTNVSAYRNNWNSINEKNLNHYNLNYNYNRSNKNSFNYTSNFNSNVYNGNRDNNNNFFN 1631

Query: 4    Y 2
            Y
Sbjct: 1632 Y 1632


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,554,175
Number of Sequences: 1657284
Number of extensions: 8849924
Number of successful extensions: 18286
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18275
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)