Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_I03
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.18 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    25   0.42 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.42 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.1  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 374 LEKWNMFFNFQVLLIIF 424
           +E WN  F +Q+LLI F
Sbjct: 626 IETWNKLFGYQILLITF 642


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = -1

Query: 233 KKIVDYQNKKVYIKRKKSXQCSMLYKQIGKQGVLPFDPLYHAKNL--*TTYVNIL*AKID 60
           K I   ++KK    +K+  QC  +Y  +G + ++  +   H+K +    TY+  L   ID
Sbjct: 106 KMIAHLKDKKKIRAKKRWSQCMYMYFLLGFRYLVNDELSAHSKEIRGENTYILALDGDID 165

Query: 59  NKKQQVLTIFDWPK 18
            + + +  + D+ K
Sbjct: 166 FQPEALHLLVDYMK 179


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = -1

Query: 233 KKIVDYQNKKVYIKRKKSXQCSMLYKQIGKQGVLPFDPLYHAKNL--*TTYVNIL*AKID 60
           K I   ++KK    +K+  QC  +Y  +G + ++  +   H+K +    TY+  L   ID
Sbjct: 420 KMIAHLKDKKKIRAKKRWSQCMYMYFLLGFRYLVNDELSAHSKEIRGENTYILALDGDID 479

Query: 59  NKKQQVLTIFDWPK 18
            + + +  + D+ K
Sbjct: 480 FQPEALHLLVDYMK 493


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 306 HLKSVTCMMHFFC 344
           HL  + C+ HFFC
Sbjct: 159 HLLFLLCIYHFFC 171



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 155 VCITCYIXMIFFFLCIPFCF 214
           +CI  ++  +FF LCI + +
Sbjct: 131 LCIYYFVVPLFFLLCIYYFY 150


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 365 CSKLEKWNMFFNFQVLLIIF 424
           C+ ++++N  F  Q+L I+F
Sbjct: 220 CNLIDEFNECFGLQILGILF 239


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 626 EVVSVWKKCKSQI 588
           EV S W +C+ QI
Sbjct: 73  EVFSAWVRCQDQI 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,750
Number of Sequences: 336
Number of extensions: 2898
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)