Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_I03
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   5.0  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   5.0  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   6.5  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 318 VTCMMHFFCKKCEL-YFVRNWKSGICSL 398
           VT   H+FC++C L  + ++ +  IC +
Sbjct: 259 VTKCKHYFCERCALAQYKKSSRCAICGV 286


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 318 VTCMMHFFCKKCEL-YFVRNWKSGICSL 398
           VT   H+FC++C L  + ++ +  IC +
Sbjct: 259 VTKCKHYFCERCALAQYKKSSRCAICGV 286


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 109 QKIYRQHTSTSYKQKLTIKSNKYLQSLTGRNNIT 8
           Q   +Q +S   +Q LTI   K L +  G N++T
Sbjct: 141 QSPQQQQSSQQLQQPLTILVPKNLSNSQGENSVT 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,253
Number of Sequences: 2352
Number of extensions: 9617
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)