Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_I01
         (503 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P30397 Cluster: Ribosomal operon-associated A protein; ...    36   0.69 
UniRef50_Q9U0K9 Cluster: Putative uncharacterized protein PFD038...    35   0.91 
UniRef50_Q76Q35 Cluster: C7L protein; n=5; Variola virus|Rep: C7...    33   4.8  
UniRef50_Q0NVA4 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q9K7Q6 Cluster: BH3305 protein; n=5; Firmicutes|Rep: BH...    33   4.8  
UniRef50_Q0SWN2 Cluster: HesB family selenoprotein; n=4; Clostri...    32   6.4  
UniRef50_Q8VYI6 Cluster: AT5g24060/MZF18_6; n=1; Arabidopsis tha...    32   8.5  

>UniRef50_P30397 Cluster: Ribosomal operon-associated A protein;
           n=2; Euglena gracilis|Rep: Ribosomal operon-associated A
           protein - Euglena gracilis
          Length = 516

 Score = 35.5 bits (78), Expect = 0.69
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
 Frame = +2

Query: 278 DIKYYYKNVLIRISKKYIEIYATIIKNIIKMKTR----FEVNFLYK*VSDC 418
           D   +  N+L+ I+KK+I+ Y   +K I+KM  +    F VN L K + DC
Sbjct: 294 DFLRFGSNILLHINKKHIQFYKLSLKMIVKMFLKKSVFFLVNLLNKKILDC 344


>UniRef50_Q9U0K9 Cluster: Putative uncharacterized protein PFD0380c;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFD0380c - Plasmodium falciparum (isolate 3D7)
          Length = 1629

 Score = 35.1 bits (77), Expect = 0.91
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = -2

Query: 448  LRKEKFLKYLTIRHLFI*KINLKTSFHFYYIFYNSGVNFNIFFRYPNQYIFIVIFDVH 275
            ++   FL   + + L   KIN K  ++FY +F+   +++N F +Y    IF +   +H
Sbjct: 1356 IKSSVFLNIKSKKKLKTNKINKKKKYYFYKLFHKFRMSYNHFIKYTQNEIFHIYEIIH 1413


>UniRef50_Q76Q35 Cluster: C7L protein; n=5; Variola virus|Rep: C7L
           protein - Variola minor virus
          Length = 76

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 340 VNFNIFFRYPNQYIFIVIFDVHL 272
           + FN +FRY N+ +F+ +FD HL
Sbjct: 39  IGFNKYFRYRNKILFVDVFDYHL 61


>UniRef50_Q0NVA4 Cluster: Putative uncharacterized protein; n=1;
           Variola virus|Rep: Putative uncharacterized protein -
           Variola virus
          Length = 84

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 340 VNFNIFFRYPNQYIFIVIFDVHL 272
           + FN +FRY N+ +F+ +FD HL
Sbjct: 47  IGFNKYFRYRNKILFVDVFDYHL 69


>UniRef50_Q9K7Q6 Cluster: BH3305 protein; n=5; Firmicutes|Rep:
           BH3305 protein - Bacillus halodurans
          Length = 286

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 355 FYNSGVNFNIFFRYPNQYIFIVI--FDVHLGPSTLWRVGNPLCPQEQQFFFCWF*LFTY 185
           FY  G+ FN+  R  NQ +FI    +  H+G +T   VG P  P E      WF L TY
Sbjct: 186 FYIEGLGFNVVARLGNQALFISTGNYHHHIGLNTWNGVGAP-TPPEHSVGLKWFSL-TY 242


>UniRef50_Q0SWN2 Cluster: HesB family selenoprotein; n=4;
           Clostridium perfringens|Rep: HesB family selenoprotein -
           Clostridium perfringens (strain SM101 / Type A)
          Length = 140

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -2

Query: 433 FLKYLTIRHLFI*KINLKTSFHFYYIFYNSGVNFNIFFRYPNQYIFIVIFDVHLGPSTLW 254
           + K +TI H FI  + L T   F    YN     N++ ++   Y  + I  V + P+TL 
Sbjct: 4   YKKIITIFHFFI-SLKLHTIAPFLICVYNLINKVNLYIKFTKIYKEVFILKVKIHPNTLD 62

Query: 253 RVGNPL 236
           +V + L
Sbjct: 63  KVKDML 68


>UniRef50_Q8VYI6 Cluster: AT5g24060/MZF18_6; n=1; Arabidopsis
           thaliana|Rep: AT5g24060/MZF18_6 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 119

 Score = 31.9 bits (69), Expect = 8.5
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
 Frame = -2

Query: 370 HFYYIFYNSGVNFNIFFRYPNQYIFIVIFDVHLGPSTLWRVGNPLCPQEQQFFFCWF*L- 194
           H   I  N+ +++   F Y   YIF V    HL  + +WR+   L  +    F  W  L 
Sbjct: 50  HIIIIRGNNSLHYVFIFLYLKVYIFFV----HLNKTLIWRLRQRLLSKSDLLFSDWVSLP 105

Query: 193 -FTYTCFRY 170
              +T FR+
Sbjct: 106 PMVFTVFRF 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,170,119
Number of Sequences: 1657284
Number of extensions: 8813319
Number of successful extensions: 21177
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21167
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)