Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_I01
         (503 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457137-1|CAG33418.1|  190|Homo sapiens TNFAIP8 protein.              30   5.3  
BC007014-1|AAH07014.1|  198|Homo sapiens tumor necrosis factor, ...    30   5.3  
BC005352-1|AAH05352.1|  198|Homo sapiens tumor necrosis factor, ...    30   5.3  
AF099936-1|AAC72976.1|  190|Homo sapiens MDC-3.13 isoform 1 prot...    30   5.3  
AF099935-1|AAC72975.1|  198|Homo sapiens MDC-3.13 isoform 2 prot...    30   5.3  
AF098933-1|AAF29435.1|  100|Homo sapiens head and neck tumor and...    30   5.3  
AF070671-1|AAC83229.1|  188|Homo sapiens TNF-induced protein GG2...    30   5.3  

>CR457137-1|CAG33418.1|  190|Homo sapiens TNFAIP8 protein.
          Length = 190

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 296 KNVLIRISKKYIEIYATIIKNIIKMKTRFEVNFLYK*VSDCEILQELF 439
           +NVL R+  +  E+   II+  +  K+   VN ++   SDCE L  L+
Sbjct: 117 RNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALY 164


>BC007014-1|AAH07014.1|  198|Homo sapiens tumor necrosis factor,
           alpha-induced protein 8 protein.
          Length = 198

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 296 KNVLIRISKKYIEIYATIIKNIIKMKTRFEVNFLYK*VSDCEILQELF 439
           +NVL R+  +  E+   II+  +  K+   VN ++   SDCE L  L+
Sbjct: 125 RNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALY 172


>BC005352-1|AAH05352.1|  198|Homo sapiens tumor necrosis factor,
           alpha-induced protein 8 protein.
          Length = 198

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 296 KNVLIRISKKYIEIYATIIKNIIKMKTRFEVNFLYK*VSDCEILQELF 439
           +NVL R+  +  E+   II+  +  K+   VN ++   SDCE L  L+
Sbjct: 125 RNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALY 172


>AF099936-1|AAC72976.1|  190|Homo sapiens MDC-3.13 isoform 1
           protein.
          Length = 190

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 296 KNVLIRISKKYIEIYATIIKNIIKMKTRFEVNFLYK*VSDCEILQELF 439
           +NVL R+  +  E+   II+  +  K+   VN ++   SDCE L  L+
Sbjct: 117 RNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALY 164


>AF099935-1|AAC72975.1|  198|Homo sapiens MDC-3.13 isoform 2
           protein.
          Length = 198

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 296 KNVLIRISKKYIEIYATIIKNIIKMKTRFEVNFLYK*VSDCEILQELF 439
           +NVL R+  +  E+   II+  +  K+   VN ++   SDCE L  L+
Sbjct: 125 RNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALY 172


>AF098933-1|AAF29435.1|  100|Homo sapiens head and neck tumor and
           metastasis related protein protein.
          Length = 100

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 296 KNVLIRISKKYIEIYATIIKNIIKMKTRFEVNFLYK*VSDCEILQELF 439
           +NVL R+  +  E+   II+  +  K+   VN ++   SDCE L  L+
Sbjct: 27  RNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALY 74


>AF070671-1|AAC83229.1|  188|Homo sapiens TNF-induced protein GG2-1
           protein.
          Length = 188

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 296 KNVLIRISKKYIEIYATIIKNIIKMKTRFEVNFLYK*VSDCEILQELF 439
           +NVL R+  +  E+   II+  +  K+   VN ++   SDCE L  L+
Sbjct: 115 RNVLSRLLNECREMLHQIIQRHLTAKSHGRVNNVFDHFSDCEFLAALY 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,321,706
Number of Sequences: 237096
Number of extensions: 1337861
Number of successful extensions: 2711
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2711
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)