Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_H24
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 324 2e-89
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 38 0.008
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 5.0
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical p... 28 6.6
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 27 8.7
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 27 8.7
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 324 bits (797), Expect = 2e-89
Identities = 141/201 (70%), Positives = 169/201 (84%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 225
MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 226 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKM 405
+ FRDPYK+KT K +A EG++TGQF++CG KA +++GN++PVG +PEGT +CN+E K
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKS 120
Query: 406 GDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPIL 585
GDRG +ARASGN+ATVI HNPD K+T ++LPSGAKKV+ S NR M+G+VAGGGR D P+L
Sbjct: 121 GDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLL 180
Query: 586 KAGRAYHKYKVKRNCWPYVRG 648
KAGR+YHKYK KRN WP VRG
Sbjct: 181 KAGRSYHKYKAKRNSWPRVRG 201
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 340 GNVMPVGAMPEGTIVCNLE-XKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKV 516
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 517 LPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYKVK 621
L + VG ++ ID I + + + ++ K
Sbjct: 218 LHRTCMATVGRLSHAD-IDGKIFGSAQMHRRFGYK 251
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 156
+GR R+ +KG F +HT K L+ LD A++
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 157 HGYIKGVVKDIIHDPGRGAPLAVVHFR 237
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 157 HGYIKGVVKDIIHDPGRGAPLAVVHFR 237
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical
protein Y57G11C.44 protein.
Length = 155
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 94 VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 219
+S ++RK + LD+++ G K ++KDI +D + P+
Sbjct: 1 MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 493 LPSGAK-KVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYKVKRNCW 633
L SGA L +S R G G D P A + YHK +KR W
Sbjct: 65 LTSGASLSNLQASRRYPSGASGAAGGSDVPYDSALKRYHKLLLKRRQW 112
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 493 LPSGAK-KVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYKVKRNCW 633
L SGA L +S R G G D P A + YHK +KR W
Sbjct: 65 LTSGASLSNLQASRRYPSGASGAAGGSDVPYDSALKRYHKLLLKRRQW 112
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 493 LPSGAK-KVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYKVKRNCW 633
L SGA L +S R G G D P A + YHK +KR W
Sbjct: 65 LTSGASLSNLQASRRYPSGASGAAGGSDVPYDSALKRYHKLLLKRRQW 112
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 493 LPSGAK-KVLPSSNRGMVGIVAGGGRIDXPILKAGRAYHKYKVKRNCW 633
L SGA L +S R G G D P A + YHK +KR W
Sbjct: 65 LTSGASLSNLQASRRYPSGASGAAGGSDVPYDSALKRYHKLLLKRRQW 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,417,847
Number of Sequences: 27780
Number of extensions: 334172
Number of successful extensions: 808
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -