BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_H16 (656 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 135 3e-32 SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 135 3e-32 SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 96 3e-20 SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 56 3e-08 SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06 SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06 SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 46 2e-05 SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 42 4e-04 SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 41 8e-04 SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002 SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 39 0.003 SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013 SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47 SB_59485| Best HMM Match : Dickkopf_N (HMM E-Value=0.2) 31 0.83 SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 30 1.9 SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 30 1.9 SB_7540| Best HMM Match : Transgly_assoc (HMM E-Value=0.46) 28 5.8 SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8 SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8 SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16) 28 7.7 >SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) Length = 200 Score = 135 bits (327), Expect = 3e-32 Identities = 59/71 (83%), Positives = 63/71 (88%) Frame = +2 Query: 428 SKALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIH 607 +K T+AKRIQ+EL EITLDPPPNCSAGPKGD+LYEW STILGPPGSVYEGGVFFLDIH Sbjct: 130 AKNQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIH 189 Query: 608 FSPXYPFKPPK 640 F YPFKPPK Sbjct: 190 FPSDYPFKPPK 200 >SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) Length = 226 Score = 135 bits (327), Expect = 3e-32 Identities = 59/71 (83%), Positives = 63/71 (88%) Frame = +2 Query: 428 SKALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIH 607 +K T+AKRIQ+EL EITLDPPPNCSAGPKGD+LYEW STILGPPGSVYEGGVFFLDIH Sbjct: 90 AKNQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIH 149 Query: 608 FSPXYPFKPPK 640 F YPFKPPK Sbjct: 150 FPSDYPFKPPK 160 >SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) Length = 181 Score = 95.9 bits (228), Expect = 3e-20 Identities = 41/46 (89%), Positives = 41/46 (89%) Frame = +2 Query: 506 SAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKV 643 SAGPKGD LYEW STILGPPGSVYEGGVFFLDIHF YPFKPPKV Sbjct: 43 SAGPKGDKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88 >SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) Length = 1282 Score = 56.0 bits (129), Expect = 3e-08 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = +2 Query: 437 LGTSAKRIQKELAEITLDPPPNCSAG-PKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFS 613 L ++ + +Q EL ++T +P + P N +EW I GPPG++Y GG F + F Sbjct: 1122 LSSAVRALQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFP 1181 Query: 614 PXYPFKPPKVTFRT 655 YP+ PP F T Sbjct: 1182 HDYPYSPPTFRFLT 1195 >SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 385 Score = 50.4 bits (115), Expect = 1e-06 Identities = 25/70 (35%), Positives = 36/70 (51%) Frame = +2 Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625 + KR+ +E E+ + A P DNL+EW T+ GPP + + GG + I P YP Sbjct: 11 AVKRLMREAKELR-NATELYHAQPLEDNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYP 69 Query: 626 FKPPKVTFRT 655 KPP + T Sbjct: 70 MKPPSIMLLT 79 >SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 473 Score = 49.2 bits (112), Expect = 3e-06 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +2 Query: 476 EITLDPPPNCSAGPKGD-NLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTF 649 E+ P SAG D +LY+W ++GPPG+ YE G F + F YP +PP +TF Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTF 401 >SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) Length = 123 Score = 46.4 bits (105), Expect = 2e-05 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = +2 Query: 524 DNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655 DNL+EW T+ GPP + + GG + I P YP KPP + T Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44 >SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) Length = 145 Score = 41.9 bits (94), Expect = 4e-04 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = +2 Query: 527 NLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655 N+ W I+ P Y G F ++I F YPFKPPK+TF+T Sbjct: 22 NILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKT 63 >SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) Length = 190 Score = 41.1 bits (92), Expect = 8e-04 Identities = 17/35 (48%), Positives = 22/35 (62%) Frame = +2 Query: 551 ILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655 ++G G+ Y G+F LDI YPF+PPKV F T Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVT 36 >SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 151 Score = 39.9 bits (89), Expect = 0.002 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +2 Query: 515 PKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655 P D++ + + I GP + YEGG F+ I P YP +PP+V T Sbjct: 5 PDKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMT 51 >SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) Length = 841 Score = 39.1 bits (87), Expect = 0.003 Identities = 16/30 (53%), Positives = 19/30 (63%) Frame = +2 Query: 551 ILGPPGSVYEGGVFFLDIHFSPXYPFKPPK 640 I GPP + +EGG + LDI YPF PPK Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPPK 722 >SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 710 Score = 37.1 bits (82), Expect = 0.013 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +2 Query: 530 LYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKV 643 L E++ GP G+ YEGGV+ + + YPFK P + Sbjct: 47 LNEFIVKFFGPVGTPYEGGVWKVRVDLPEKYPFKSPSI 84 >SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 897 Score = 31.9 bits (69), Expect = 0.47 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%) Frame = +2 Query: 389 KPDTKENKPNHKMSKALGTSA-----KRIQKELAEITLDPPPNCSAGPKGDNLYEW---V 544 K +TK +P+ ++++ + A KR+ KE +++ SA DNL+EW + Sbjct: 711 KTETKIAEPSMEVARMSSSHAQRVRSKRLMKEFQDVSRKTERIFSAELVDDNLFEWNVKL 770 Query: 545 STILGPP----GSVYEGGVF-FLDIHFSPXYPFKPP 637 TI G V G F L+I F +PF PP Sbjct: 771 HTIDGDSLLYRDMVETGSKFILLNITFPENFPFAPP 806 >SB_59485| Best HMM Match : Dickkopf_N (HMM E-Value=0.2) Length = 450 Score = 31.1 bits (67), Expect = 0.83 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = -2 Query: 553 DGRHPFIQIISFWSCTAVWW--WVQCNFCQFLLNPLGRCAESL 431 DG F+ ++ + SCT W+ +C +F+ LG C E+L Sbjct: 72 DGNIRFVFVLEYKSCTVCWYSGMFECRKYKFIERFLGFCVENL 114 >SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) Length = 55 Score = 29.9 bits (64), Expect = 1.9 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +2 Query: 551 ILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655 + GP + Y G F DI F YP PP V T Sbjct: 12 VTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46 >SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) Length = 739 Score = 29.9 bits (64), Expect = 1.9 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 551 ILGPPGSVYEGGVFFLDIHFSPXYPFKPP 637 I GP G+ Y+ G+F DI YP PP Sbjct: 640 IEGPAGTPYDHGLFAFDILLPANYPDAPP 668 >SB_7540| Best HMM Match : Transgly_assoc (HMM E-Value=0.46) Length = 320 Score = 28.3 bits (60), Expect = 5.8 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +1 Query: 169 LNLRSGSVKNYEVVCVGAGDG 231 LN RS S+ NY+V+ +G G G Sbjct: 248 LNPRSNSMSNYDVLIIGGGPG 268 >SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 79 Score = 28.3 bits (60), Expect = 5.8 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 569 SVYEGGVFFLDIHFSPXYPFKPPKVTF 649 +V+E ++ L I P YP KPP V F Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKF 27 >SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 41 Score = 28.3 bits (60), Expect = 5.8 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 569 SVYEGGVFFLDIHFSPXYPFKPPKVTF 649 +V+E ++ L I P YP KPP V F Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKF 27 >SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16) Length = 980 Score = 27.9 bits (59), Expect = 7.7 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = +2 Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFL 598 S ++ E + + PNC+ + ++W+S +L S++ GGV+ L Sbjct: 164 SVNVLKDERIVVVAEQRPNCTE----EESFQWMSHVLPAVDSIHSGGVYCL 210 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,994,244 Number of Sequences: 59808 Number of extensions: 409049 Number of successful extensions: 1071 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 892 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1069 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1681430875 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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