Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_H16
(656 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 122 3e-28
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 102 2e-22
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 101 3e-22
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 101 3e-22
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 100 1e-21
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 99 3e-21
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 98 4e-21
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 98 4e-21
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 98 5e-21
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 98 5e-21
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 98 5e-21
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 97 7e-21
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 97 7e-21
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 91 6e-19
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 85 3e-17
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 68 5e-12
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 67 1e-11
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 64 8e-11
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 63 2e-10
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 61 6e-10
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 61 6e-10
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 61 6e-10
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 60 1e-09
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 60 2e-09
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 60 2e-09
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 59 2e-09
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 59 2e-09
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 58 5e-09
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 57 1e-08
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 56 2e-08
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 56 2e-08
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 54 1e-07
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 54 1e-07
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 54 1e-07
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 53 2e-07
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 49 2e-06
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 49 2e-06
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 48 5e-06
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 48 7e-06
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 48 7e-06
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 47 1e-05
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 44 7e-05
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 44 7e-05
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 43 2e-04
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 43 2e-04
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 42 4e-04
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 41 8e-04
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 40 0.001
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 40 0.001
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 40 0.001
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 40 0.001
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 40 0.001
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 38 0.006
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 38 0.008
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 35 0.055
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 33 0.17
At5g23450.2 68418.m02752 diacylglycerol kinase family protein co... 30 1.2
At5g23450.1 68418.m02751 diacylglycerol kinase family protein co... 30 1.2
At1g29400.2 68414.m03597 RNA recognition motif (RRM)-containing ... 30 1.6
At1g29400.1 68414.m03596 RNA recognition motif (RRM)-containing ... 30 1.6
At5g20770.1 68418.m02468 hypothetical protein 29 3.6
At3g48780.1 68416.m05327 serine C-palmitoyltransferase, putative... 28 4.8
At3g14630.1 68416.m01852 cytochrome P450, putative similar to GB... 28 4.8
At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing ... 28 6.3
At5g55550.2 68418.m06921 RNA recognition motif (RRM)-containing ... 28 6.3
At5g55550.1 68418.m06920 RNA recognition motif (RRM)-containing ... 28 6.3
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 27 8.3
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 122 bits (293), Expect = 3e-28
Identities = 48/74 (64%), Positives = 62/74 (83%)
Frame = +2
Query: 434 ALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFS 613
++ S KRIQ+E+AE+ +DPPP+CSAGPKGDNLY W++TI+GP G+ YEGG+FFLDI F
Sbjct: 33 SVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFP 92
Query: 614 PXYPFKPPKVTFRT 655
YPFKPPK+ F+T
Sbjct: 93 SDYPFKPPKLVFKT 106
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 102 bits (244), Expect = 2e-22
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
++KRI KEL ++ DPP NCSAGP ++++ W +TI+GPP S Y GGVF + IHF P YP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV+F+T
Sbjct: 62 FKPPKVSFKT 71
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 101 bits (243), Expect = 3e-22
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
++KRI KEL ++ DPP +CSAGP GD++++W +TI+GP S + GGVF + IHF P YP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV FRT
Sbjct: 62 FKPPKVAFRT 71
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 101 bits (243), Expect = 3e-22
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
++KRI KEL ++ DPP +CSAGP GD++++W +TI+GP S + GGVF + IHF P YP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV FRT
Sbjct: 62 FKPPKVAFRT 71
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (239), Expect = 1e-21
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
+ +RI KEL E+ DPP +CSAGP G++++ W +TI+GP S Y GGVF ++IHF P YP
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV FRT
Sbjct: 62 FKPPKVVFRT 71
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 98.7 bits (235), Expect = 3e-21
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = +2
Query: 437 LGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSP 616
L ++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP S Y GGVF + IHF P
Sbjct: 29 LEMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPP 88
Query: 617 XYPFKPPKVTFRT 655
YPFKPPKV FRT
Sbjct: 89 DYPFKPPKVAFRT 101
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 98.3 bits (234), Expect = 4e-21
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP S Y GGVF + IHF P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV FRT
Sbjct: 62 FKPPKVAFRT 71
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 98.3 bits (234), Expect = 4e-21
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP S Y GGVF + IHF P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV FRT
Sbjct: 62 FKPPKVAFRT 71
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 97.9 bits (233), Expect = 5e-21
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP S Y GGVF + IHF P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV FRT
Sbjct: 62 FKPPKVAFRT 71
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 97.9 bits (233), Expect = 5e-21
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP S Y GGVF + IHF P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV FRT
Sbjct: 62 FKPPKVAFRT 71
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 97.9 bits (233), Expect = 5e-21
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP S Y GGVF + IHF P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV FRT
Sbjct: 62 FKPPKVAFRT 71
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 97.5 bits (232), Expect = 7e-21
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP S Y GGVF + IHF P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV FRT
Sbjct: 62 FKPPKVAFRT 71
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 97.5 bits (232), Expect = 7e-21
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP S Y GGVF + IHF P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 626 FKPPKVTFRT 655
FKPPKV FRT
Sbjct: 62 FKPPKVAFRT 71
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCS-AGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXY 622
++KRI KEL ++ DPP +C AGP ++++ W +TI+GP S Y GGVF + IHF P Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 623 PFKPPKVTFRT 655
PFKPPKV FRT
Sbjct: 62 PFKPPKVAFRT 72
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGD-NLYEWVSTILGPPGSVYEGGVFFLDIHFSPXY 622
++KRI +EL ++ PP NCSAGP + +++ W +TI+GP S Y GGVF + I FS Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 623 PFKPPKVTFRT 655
PFKPPKV F+T
Sbjct: 62 PFKPPKVNFKT 72
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 68.1 bits (159), Expect = 5e-12
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +2
Query: 506 SAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
S G +N+YEW + I GP G+ YEGG+F L I F YPFKPPK TF+T
Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKT 77
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/68 (45%), Positives = 41/68 (60%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
KR+Q EL + + P SA P+ DN++ W TI G +V+EG + L + FS YPFK
Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFK 97
Query: 632 PPKVTFRT 655
PPKV F T
Sbjct: 98 PPKVKFET 105
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/68 (44%), Positives = 40/68 (58%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
KR+Q EL + + P SA P+ DN++ W TI G +V+EG + L + FS YPFK
Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFK 98
Query: 632 PPKVTFRT 655
PKV F T
Sbjct: 99 SPKVKFET 106
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 62.9 bits (146), Expect = 2e-10
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2
Query: 515 PKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
P +N++ W +T+ GP G YE GVF + +H P YP++PPK+TF+T
Sbjct: 54 PSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKT 100
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 61.3 bits (142), Expect = 6e-10
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
KR+ ++ + DPP S P+ +N+ W + I GP + ++GG F L + FS YP K
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 632 PPKVTF 649
PP V F
Sbjct: 67 PPTVRF 72
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 61.3 bits (142), Expect = 6e-10
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
KR+ ++ + DPP S P+ +N+ W + I GP + ++GG F L + FS YP K
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 632 PPKVTF 649
PP V F
Sbjct: 67 PPTVRF 72
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 61.3 bits (142), Expect = 6e-10
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
KR+ ++ + DPP S P+ +N+ W + I GP + ++GG F L + FS YP K
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 632 PPKVTF 649
PP V F
Sbjct: 67 PPTVRF 72
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
KR+ + + DPP S P+ +N+ W + I GP + ++GG F L +HF+ YP K
Sbjct: 7 KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNK 66
Query: 632 PPKVTF 649
PP V F
Sbjct: 67 PPIVRF 72
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
+RI KE + +P P SA P DN+ + ILGP S YEGGVF L++ YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 632 PPKVTFRT 655
PKV F T
Sbjct: 68 APKVRFLT 75
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
+RI KE + +P P SA P DN+ + ILGP S YEGGVF L++ YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 632 PPKVTFRT 655
PKV F T
Sbjct: 68 APKVRFLT 75
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 455 RIQKELAEITLDPPPN-CSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
RIQKEL + + + PK DNL TI GP G+ YEGG F +DI YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 632 PPKVTFRT 655
PPK+ F T
Sbjct: 66 PPKMQFST 73
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 458 IQKELAEITLDPPPNCSAGPKGD-NLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKP 634
+QK+L ++ P SAG + N++EW TI+GPP ++YEGG F+ + F YP P
Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSP 68
Query: 635 PKVTF 649
P V F
Sbjct: 69 PTVRF 73
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/68 (42%), Positives = 37/68 (54%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
+RI KE + +P P SA P +N+ + ILGP S YEGGVF L++ YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 632 PPKVTFRT 655
PKV F T
Sbjct: 68 APKVRFLT 75
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 458 IQKELAEITLDPPPNCSAGPKGD-NLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKP 634
+QK+L ++ P SAG + N+++W +I+GPP ++YEGG F + F YP P
Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSP 69
Query: 635 PKVTF 649
P VTF
Sbjct: 70 PTVTF 74
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
KR+QKE + +P + A P +++ EW + G G+ + GG ++ I F P YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 632 PPKVTFRT 655
PP +T T
Sbjct: 68 PPGITMTT 75
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
KR+QKE + +P + A P +++ EW + G G+ + GG ++ I F P YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 632 PPKVTFRT 655
PP +T T
Sbjct: 68 PPGITMTT 75
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +2
Query: 398 TKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVY 577
T + P+ K + + R+QKEL+E ++PP DNL +WV + G PG++Y
Sbjct: 2 TSSSSPSRKALSKI--ACNRLQKELSEWQVNPPTGFKHRVT-DNLQKWVIEVTGAPGTLY 58
Query: 578 EGGVFFLDIHFSPXYPFKPPKVTF 649
+ L + F YP + P+V F
Sbjct: 59 ANETYNLQVEFPQHYPMEAPQVIF 82
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
+ KRI +E+ E+ +P + + P +N++EW I GP + +EGG++ I YP
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYP 71
Query: 626 FKPPKVTFRT 655
FKPP T
Sbjct: 72 FKPPSFMLLT 81
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/79 (32%), Positives = 41/79 (51%)
Frame = +2
Query: 413 PNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVF 592
P+ K + T+ R+QKEL E ++PP DNL W+ ++G PG++Y +
Sbjct: 7 PSRKTLSKIATN--RLQKELVEWQMNPPTGFKHKVT-DNLQRWIIEVIGAPGTLYANDTY 63
Query: 593 FLDIHFSPXYPFKPPKVTF 649
L + F YP + P+V F
Sbjct: 64 QLQVDFPEHYPMESPQVIF 82
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 398 TKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVY 577
T + P+ K + + R+QKEL+E L+PP DNL +W + G PG++Y
Sbjct: 2 TSSSAPSRKALSKI--ACNRLQKELSEWQLNPPTGFRHKVT-DNLQKWTIDVTGAPGTLY 58
Query: 578 EGGVFFLDIHFSPXYPFKPPKVTF 649
+ L + F YP + P+V F
Sbjct: 59 ANETYQLQVEFPEHYPMEAPQVVF 82
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2
Query: 527 NLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTF 649
N++EW TI+GPP ++YEGG F + F YP PP V F
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRF 105
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +2
Query: 455 RIQKELAEITLDPP-----PNCSAGPKGDNLYEWVSTI----LGPPGSVYEGGVFFLDIH 607
R+QKEL + DPP P+ S+ G + STI GP +VY G+F L I
Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69
Query: 608 FSPXYPFKPPKVTFRT 655
YPF+PP V+F T
Sbjct: 70 IPERYPFQPPIVSFAT 85
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 524 DNLY--EWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
D++Y W TILGPP + YEG +F L + YP PP V F+T
Sbjct: 40 DDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQT 85
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 47.6 bits (108), Expect = 7e-06
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +2
Query: 446 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYP 625
+ R+QKE E +PP DNL W+ + G PG++Y + L + F YP
Sbjct: 16 ATNRLQKEFMEWQTNPPSGFKHRVS-DNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYP 74
Query: 626 FKPPKVTFR 652
+ P+V F+
Sbjct: 75 MEAPQVIFQ 83
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 47.6 bits (108), Expect = 7e-06
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2
Query: 527 NLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTF 649
NL W TI G G+ +EGG F L +HFS YP KPPK F
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKF 78
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 446 SAKRIQKELAEITLDP--PPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPX 619
S R+ KE E+ + P+ N+++W + I GP + YEGGVF L
Sbjct: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
Query: 620 YPFKPPKVTFRT 655
YP +PP+V F T
Sbjct: 64 YPLQPPQVRFLT 75
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 521 GDNLY--EWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
GD++Y W TI+GP +V+EG ++ L + YP KPP V F +
Sbjct: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHS 87
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 521 GDNLY--EWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
GD++Y W TI+GP +V+EG ++ L + YP KPP V F +
Sbjct: 40 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHS 86
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
K++ KEL + PP ++ + + I GP G+ YE G+F + + S +P
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 632 PPKVTFRT 655
PPK F T
Sbjct: 73 PPKGYFMT 80
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
K++Q+E + + + P + + + ++G PG+ Y G+FF DI P YP +
Sbjct: 665 KKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHE 724
Query: 632 PPKVTFRT 655
PP V + +
Sbjct: 725 PPMVHYHS 732
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 530 LYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
+ W TILGP + YEG +F L + YP PP V F++
Sbjct: 44 MQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQS 85
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2
Query: 551 ILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
ILGP S YEGGVF L++ YP PKV F T
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 42
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 521 GDNLY--EWVSTILGPPG-SVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
GD++Y W TI+GP +V+EG ++ L + YP KPP V F +
Sbjct: 41 GDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHS 88
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +2
Query: 449 AKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPF 628
AKRIQ E + D P + + I+G G+ Y G+FF DI F YP
Sbjct: 334 AKRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPS 393
Query: 629 KPPKVTFRT 655
PP V + +
Sbjct: 394 TPPIVHYHS 402
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 521 GDNLY--EWVSTILGPPG-SVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
GD++Y W TI+GP +V+EG ++ L + YP KPP V F +
Sbjct: 40 GDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHS 87
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 524 DNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
D + E+ GP S+YEGGV+ + + YP+K P V F T
Sbjct: 27 DGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFIT 70
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 545 STILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
+ I+G G+ Y G+FF DI F YP PPKV + +
Sbjct: 639 AVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHS 675
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 452 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
K++Q + + D P S + + I+G G+ Y G+FF DI F YP
Sbjct: 274 KKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 333
Query: 632 PPKVTFRT 655
PP V + +
Sbjct: 334 PPNVHYHS 341
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 545 STILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
+ I+G G+ Y G+FF DI F YP PP V + +
Sbjct: 951 AVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHS 987
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 524 DNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTF 649
D+L + T GP S+Y+GGV+ + + YP+K P V F
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGF 68
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 524 DNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
D + E+ GP S+Y+GGV+ + + YP+K P V F T
Sbjct: 27 DGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFIT 70
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 34.7 bits (76), Expect = 0.055
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 545 STILGPPGSVYEGGVFFLDIHFSPXYPFKPPKVTFRT 655
+ I+G G+ Y+ G+FF D H YP PP + +
Sbjct: 884 AVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHS 920
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 455 RIQKELAEITLDPPPNCSAG-PKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPXYPFK 631
R+ K+++E+ L P +C P G N + P Y G F S YP +
Sbjct: 35 RLHKDISELNL--PKSCKISFPNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHE 92
Query: 632 PPKVTFRT 655
PKV +T
Sbjct: 93 APKVKCKT 100
>At5g23450.2 68418.m02752 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 763
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 392 PDTKENKPNHKMSKALGTSAKRIQKELAEITL--DPPPNCSAGPKGDNLYEWVSTILGPP 565
P + PN ++ S R+ K +T DPP CS G G E +S+ + P
Sbjct: 538 PQAQSTTPNWPRTR----SKSRMDKGWMGLTSVQDPPTRCSWGNTGGQDREDISSTVSDP 593
Query: 566 GSVYEGG 586
G +++ G
Sbjct: 594 GPIWDAG 600
>At5g23450.1 68418.m02751 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 763
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 392 PDTKENKPNHKMSKALGTSAKRIQKELAEITL--DPPPNCSAGPKGDNLYEWVSTILGPP 565
P + PN ++ S R+ K +T DPP CS G G E +S+ + P
Sbjct: 538 PQAQSTTPNWPRTR----SKSRMDKGWMGLTSVQDPPTRCSWGNTGGQDREDISSTVSDP 593
Query: 566 GSVYEGG 586
G +++ G
Sbjct: 594 GPIWDAG 600
>At1g29400.2 68414.m03597 RNA recognition motif (RRM)-containing
protein similar to GI:6650523 from [Arabidopsis
thaliana]
Length = 800
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 558 PRMVDTHSYKLSPFGPALQFGGGSNVISANSF 463
P+M + ++ LSP GP + GGG +S + F
Sbjct: 436 PKMDNKYTGNLSPSGPLISNGGGIETLSGSEF 467
>At1g29400.1 68414.m03596 RNA recognition motif (RRM)-containing
protein similar to GI:6650523 from [Arabidopsis
thaliana]
Length = 800
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 558 PRMVDTHSYKLSPFGPALQFGGGSNVISANSF 463
P+M + ++ LSP GP + GGG +S + F
Sbjct: 436 PKMDNKYTGNLSPSGPLISNGGGIETLSGSEF 467
>At5g20770.1 68418.m02468 hypothetical protein
Length = 231
Score = 28.7 bits (61), Expect = 3.6
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2
Query: 655 CSECHLWWLKR 623
C+EC+LWWL R
Sbjct: 215 CNECYLWWLSR 225
>At3g48780.1 68416.m05327 serine C-palmitoyltransferase, putative
similar to serine palmitoyltransferase from Solanum
tuberosum [GI:4995890], Homo sapiens [SP|O15270], Mus
musculus [SP|P97363]
Length = 489
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 303 QVYH*IX*CLVHLVHQA----VELVEAXVQQTANQTRKRTNQTIKCQRLSAHRPRGF 461
++YH I C + A +++VE V N+T KRT +T +C L ++ GF
Sbjct: 58 RLYHRIQDCFGRPISSAPDAWIDVVER-VSDDNNKTLKRTTKTSRCLNLGSYNYLGF 113
>At3g14630.1 68416.m01852 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 508
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 328 VWCIWFIRQWNWSRXK 375
+WCIW I +W W + K
Sbjct: 14 LWCIWRILEWVWLKPK 29
>At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 460
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 558 PRMVDTHSYKLSPFGPALQFGGGSNVISANSF 463
P+ + S SP + +GGGSN + ANS+
Sbjct: 187 PKEISPVSNIRSPLASGVNYGGGSNRMPANSY 218
>At5g55550.2 68418.m06921 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 460
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 558 PRMVDTHSYKLSPFGPALQFGGGSNVISANSF 463
P+ + S SP + +GGGSN + ANS+
Sbjct: 187 PKEISPVSNIRSPLASGVNYGGGSNRMPANSY 218
>At5g55550.1 68418.m06920 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 448
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 558 PRMVDTHSYKLSPFGPALQFGGGSNVISANSF 463
P+ + S SP + +GGGSN + ANS+
Sbjct: 187 PKEISPVSNIRSPLASGVNYGGGSNRMPANSY 218
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 395 DTKENKPNHKMSKALGTSAKRIQKELAEITLDPPPNCSAGPKG 523
DT EN+ N ++KA + QK LAE T + +AG KG
Sbjct: 732 DTFENRVNQVLNKARDDAGSSAQKSLAE-TNNLKAMVTAGSKG 773
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,884,767
Number of Sequences: 28952
Number of extensions: 295843
Number of successful extensions: 853
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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