Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_H15
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D38553-1|BAA07556.1|  747|Homo sapiens HCAP-H protein.                 35   0.29 
BC024211-1|AAH24211.1|  741|Homo sapiens non-SMC condensin I com...    33   0.89 

>D38553-1|BAA07556.1|  747|Homo sapiens HCAP-H protein.
          Length = 747

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = -2

Query: 590 Q*WREKCNDTDYTYNIDYPTQHTAPPKTKFLRNTVNHSKIVSFHXDKLQEFNQTN 426
           Q WR     TD+ YN+D   Q    P T+ L+    H ++ + H +++++++  N
Sbjct: 507 QNWRATTLPTDFNYNVDTLVQLHLKPGTRLLKMAQGH-RVETEHYEEIEDYDYNN 560


>BC024211-1|AAH24211.1|  741|Homo sapiens non-SMC condensin I
           complex, subunit H protein.
          Length = 741

 Score = 33.1 bits (72), Expect = 0.89
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -2

Query: 590 Q*WREKCNDTDYTYNIDYPTQHTAPPKTKFLRNTVNHSKIVSFHXDKLQEFNQTN 426
           Q WR     TD+ YN+D   Q    P T+ L+    H +  + H +++++++  N
Sbjct: 501 QNWRATTLPTDFNYNVDTLVQLHLKPGTRLLKMAQGH-RAETEHYEEIEDYDYNN 554


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,964,876
Number of Sequences: 237096
Number of extensions: 1147694
Number of successful extensions: 1456
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)