Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_H15
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    23   1.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.5  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   7.9  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   7.9  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   7.9  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   7.9  

>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
          hormone-I protein.
          Length = 52

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 51 VNSTDVIRARIFIEL 7
          VNS DV+R R+ +EL
Sbjct: 14 VNSMDVLRQRVLLEL 28


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 545  IDYPTQHTAPPKTKFLRNTVNHS 477
            +  P Q   PP +   R TVNH+
Sbjct: 1277 VSVPQQQQLPPSSPQPRLTVNHA 1299


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 506 KFLRNTVNHSKIVSFHXDKLQEFNQTNY*NLQY 408
           K + +  N+ K  +++      +N  NY  LQY
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQY 112


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 506 KFLRNTVNHSKIVSFHXDKLQEFNQTNY*NLQY 408
           K + +  N+ K  +++      +N  NY  LQY
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQY 112


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 506 KFLRNTVNHSKIVSFHXDKLQEFNQTNY*NLQY 408
           K + +  N+ K  +++      +N  NY  LQY
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQY 112


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 506 KFLRNTVNHSKIVSFHXDKLQEFNQTNY*NLQY 408
           K + +  N+ K  +++      +N  NY  LQY
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQY 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,778
Number of Sequences: 438
Number of extensions: 2851
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)