Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_H12
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000573-1|AAH00573.1| 139|Homo sapiens cornichon homolog 4 (Dr... 103 6e-22
AK222634-1|BAD96354.1| 139|Homo sapiens HSPC163 protein variant... 100 4e-21
BC103741-1|AAI03742.1| 144|Homo sapiens cornichon homolog (Dros... 54 6e-07
AY358635-1|AAQ88998.1| 144|Homo sapiens CNIL protein. 54 6e-07
AF104398-1|AAC98388.1| 144|Homo sapiens cornichon protein. 54 6e-07
AF031379-1|AAD32301.1| 134|Homo sapiens cornichon-like protein ... 53 1e-06
BC047953-1|AAH47953.1| 160|Homo sapiens cornichon homolog 2 (Dr... 33 1.2
BC022780-1|AAH22780.1| 160|Homo sapiens cornichon homolog 3 (Dr... 30 6.2
AL596330-1|CAH73437.1| 160|Homo sapiens cornichon homolog 3 (Dr... 30 6.2
AK096312-1|BAC04760.1| 160|Homo sapiens protein ( Homo sapiens ... 30 6.2
>BC000573-1|AAH00573.1| 139|Homo sapiens cornichon homolog 4
(Drosophila) protein.
Length = 139
Score = 103 bits (247), Expect = 6e-22
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +1
Query: 400 ETVLFSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAHTLITFL 579
E V+F L+D A++FL +Y+IITLSDLECDY+NA+ CC KLN W++P+ I HT++T L
Sbjct: 2 EAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVL 61
Query: 580 LVTHGQLVLFFLNLPLFIWLTYEY 651
L+ +F LNLP+ W Y Y
Sbjct: 62 LLMSLHWFIFLLNLPVATWNIYRY 85
>AK222634-1|BAD96354.1| 139|Homo sapiens HSPC163 protein variant
protein.
Length = 139
Score = 100 bits (240), Expect = 4e-21
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +1
Query: 400 ETVLFSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAHTLITFL 579
E V+F L+ A++FL +Y+IITLSDLECDY+NA+ CC KLN W++P+ I HT++T L
Sbjct: 2 EAVVFVFSLLGCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVL 61
Query: 580 LVTHGQLVLFFLNLPLFIWLTYEY 651
L+ +F LNLP+ W Y Y
Sbjct: 62 LLMSLHWFIFLLNLPVATWNIYRY 85
>BC103741-1|AAI03742.1| 144|Homo sapiens cornichon homolog
(Drosophila) protein.
Length = 144
Score = 53.6 bits (123), Expect = 6e-07
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +1
Query: 412 FSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAHTLITFLLVTH 591
+ L L+ T A++F I++II +L+ DY N + C+ LN ++P+Y+ H + +
Sbjct: 10 YMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCA 69
Query: 592 GQLVLFFLNLPLFIWLTYEY 651
+ + LN+PL + + Y
Sbjct: 70 AEWLTLGLNMPLLAYHIWRY 89
>AY358635-1|AAQ88998.1| 144|Homo sapiens CNIL protein.
Length = 144
Score = 53.6 bits (123), Expect = 6e-07
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +1
Query: 412 FSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAHTLITFLLVTH 591
+ L L+ T A++F I++II +L+ DY N + C+ LN ++P+Y+ H + +
Sbjct: 10 YMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCA 69
Query: 592 GQLVLFFLNLPLFIWLTYEY 651
+ + LN+PL + + Y
Sbjct: 70 AEWLTLGLNMPLLAYHIWRY 89
>AF104398-1|AAC98388.1| 144|Homo sapiens cornichon protein.
Length = 144
Score = 53.6 bits (123), Expect = 6e-07
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +1
Query: 412 FSLCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAHTLITFLLVTH 591
+ L L+ T A++F I++II +L+ DY N + C+ LN ++P+Y+ H + +
Sbjct: 10 YMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCA 69
Query: 592 GQLVLFFLNLPLFIWLTYEY 651
+ + LN+PL + + Y
Sbjct: 70 AEWLTLGLNMPLLAYHIWRY 89
>AF031379-1|AAD32301.1| 134|Homo sapiens cornichon-like protein
protein.
Length = 134
Score = 52.8 bits (121), Expect = 1e-06
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +1
Query: 418 LCLIDTGAVLFLLIYYIITLSDLECDYLNAQECCDKLNYWLVPKYIAHTLITFLLVTHGQ 597
L L+ T A++F I++II +L+ DY N + C+ LN ++P+Y+ H + + +
Sbjct: 2 LALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCAAE 61
Query: 598 LVLFFLNLPLFIWLTYEY 651
+ LN+PL + + Y
Sbjct: 62 WLTLGLNMPLLAYHIWRY 79
>BC047953-1|AAH47953.1| 160|Homo sapiens cornichon homolog 2
(Drosophila) protein.
Length = 160
Score = 32.7 bits (71), Expect = 1.2
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Frame = +1
Query: 412 FSLCLIDTGAVLFLLIYYIITLSDLECDYLNA----------------QECCDKLNYWLV 543
+ L L+ +++F +I++II +L D+ N + C L +V
Sbjct: 10 YMLTLVLCASLIFFVIWHIIAFDELRTDFKNPIDQGNPARARERLKNIERICCLLRKLVV 69
Query: 544 PKYIAHTLITFLLVTHGQLVLFFLNLPLFIWLTYEY 651
P+Y H L + + + V LN+PL + + Y
Sbjct: 70 PEYSIHGLFCLMFLCAAEWVTLGLNIPLLFYHLWRY 105
>BC022780-1|AAH22780.1| 160|Homo sapiens cornichon homolog 3
(Drosophila) protein.
Length = 160
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Frame = +1
Query: 412 FSLCLIDTGAVLFLLIYYIITLSDLECDYL----------------NAQECCDKLNYWLV 543
+ L L+ A++F I++II +L D+ N + C L ++
Sbjct: 10 YMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVHARERLRNIERICFLLRKLVL 69
Query: 544 PKYIAHTLITFLLVTHGQLVLFFLNLPLFIWLTYEY 651
P+Y H+L + + + + LN+PL + + Y
Sbjct: 70 PEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRY 105
>AL596330-1|CAH73437.1| 160|Homo sapiens cornichon homolog 3
(Drosophila) protein.
Length = 160
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Frame = +1
Query: 412 FSLCLIDTGAVLFLLIYYIITLSDLECDYL----------------NAQECCDKLNYWLV 543
+ L L+ A++F I++II +L D+ N + C L ++
Sbjct: 10 YMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVHARERLRNIERICFLLRKLVL 69
Query: 544 PKYIAHTLITFLLVTHGQLVLFFLNLPLFIWLTYEY 651
P+Y H+L + + + + LN+PL + + Y
Sbjct: 70 PEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRY 105
>AK096312-1|BAC04760.1| 160|Homo sapiens protein ( Homo sapiens
cDNA FLJ38993 fis, clone NT2RI2009194, highly similar to
CORNICHON-LIKE PROTEIN. ).
Length = 160
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 16/96 (16%)
Frame = +1
Query: 412 FSLCLIDTGAVLFLLIYYIITLSDLECDYL----------------NAQECCDKLNYWLV 543
+ L L+ A++F I++II +L D+ N + C L ++
Sbjct: 10 YMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVHARERLRNIERICFLLRKLVL 69
Query: 544 PKYIAHTLITFLLVTHGQLVLFFLNLPLFIWLTYEY 651
P+Y H+L + + + + LN+PL + + Y
Sbjct: 70 PEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRY 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,140,762
Number of Sequences: 237096
Number of extensions: 1697304
Number of successful extensions: 2463
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2463
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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